BLASTX nr result
ID: Zingiber25_contig00041613
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00041613
(310 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006643852.1| PREDICTED: nuclear distribution protein nudF... 124 1e-26
ref|NP_001042240.1| Os01g0185400 [Oryza sativa Japonica Group] g... 124 1e-26
gb|EEE54011.1| hypothetical protein OsJ_00668 [Oryza sativa Japo... 124 1e-26
gb|EEC70075.1| hypothetical protein OsI_00688 [Oryza sativa Indi... 124 1e-26
ref|XP_002324039.2| hypothetical protein POPTR_0017s11520g [Popu... 119 4e-25
dbj|BAJ95322.1| predicted protein [Hordeum vulgare subsp. vulgare] 118 9e-25
ref|XP_006482547.1| PREDICTED: F-box/WD repeat-containing protei... 117 2e-24
ref|XP_006431092.1| hypothetical protein CICLE_v10011541mg [Citr... 117 2e-24
gb|EMJ17998.1| hypothetical protein PRUPE_ppa023545mg, partial [... 116 4e-24
ref|XP_006593670.1| PREDICTED: F-box/WD repeat-containing protei... 115 8e-24
ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c... 114 1e-23
emb|CBI22162.3| unnamed protein product [Vitis vinifera] 114 1e-23
emb|CAN79923.1| hypothetical protein VITISV_042443 [Vitis vinifera] 114 1e-23
gb|EXC32622.1| TAF5-like RNA polymerase II p300/CBP-associated f... 114 2e-23
ref|NP_001158923.1| uncharacterized protein LOC100303822 [Zea ma... 112 4e-23
gb|EOY03388.1| F-box family protein [Theobroma cacao] 111 1e-22
ref|XP_003564557.1| PREDICTED: ribosome assembly protein C18.05c... 109 3e-22
gb|ESW23198.1| hypothetical protein PHAVU_004G026700g [Phaseolus... 108 7e-22
ref|XP_002457213.1| hypothetical protein SORBIDRAFT_03g003380 [S... 107 2e-21
ref|XP_004968486.1| PREDICTED: nuclear distribution protein nudF... 104 1e-20
>ref|XP_006643852.1| PREDICTED: nuclear distribution protein nudF 2-like isoform X1
[Oryza brachyantha]
Length = 420
Score = 124 bits (311), Expect = 1e-26
Identities = 61/102 (59%), Positives = 74/102 (72%)
Frame = +3
Query: 3 RIRVDFAGIHLEEAFMAHGARITCMRLFPIVETSLFRNGMHPMDNFIVTSSSDHTIRLRW 182
R+RVD I L E + +H ARITCMRLFP+++T LFR + +VTSS+D T+R+ W
Sbjct: 40 RLRVDCPEIELVETYRSHSARITCMRLFPLIDTPLFRGDSQTNEKALVTSSADRTVRVCW 99
Query: 183 KGGPLRCFKGHSGPVLSLADTLLGDSGSKFLASGGEDCTVRL 308
KG RCFKGHSGPV +L+D LLGD K LASGGEDCTVRL
Sbjct: 100 KGHS-RCFKGHSGPVTALSDKLLGDGEFKILASGGEDCTVRL 140
>ref|NP_001042240.1| Os01g0185400 [Oryza sativa Japonica Group]
gi|55295931|dbj|BAD67799.1| unknown protein [Oryza
sativa Japonica Group] gi|113531771|dbj|BAF04154.1|
Os01g0185400 [Oryza sativa Japonica Group]
Length = 413
Score = 124 bits (311), Expect = 1e-26
Identities = 61/102 (59%), Positives = 74/102 (72%)
Frame = +3
Query: 3 RIRVDFAGIHLEEAFMAHGARITCMRLFPIVETSLFRNGMHPMDNFIVTSSSDHTIRLRW 182
R+RVD I L E + +HGARITCMRLFP+++ LFR + +VTSS+D T+RL W
Sbjct: 17 RLRVDCPEIELVETYKSHGARITCMRLFPLIDIPLFRGDSQTNEKALVTSSADRTVRLCW 76
Query: 183 KGGPLRCFKGHSGPVLSLADTLLGDSGSKFLASGGEDCTVRL 308
KG RCF+GHSGPV +L+D LLGD K LASGGEDCTVRL
Sbjct: 77 KGHS-RCFRGHSGPVTALSDKLLGDGEFKLLASGGEDCTVRL 117
>gb|EEE54011.1| hypothetical protein OsJ_00668 [Oryza sativa Japonica Group]
Length = 512
Score = 124 bits (311), Expect = 1e-26
Identities = 61/102 (59%), Positives = 74/102 (72%)
Frame = +3
Query: 3 RIRVDFAGIHLEEAFMAHGARITCMRLFPIVETSLFRNGMHPMDNFIVTSSSDHTIRLRW 182
R+RVD I L E + +HGARITCMRLFP+++ LFR + +VTSS+D T+RL W
Sbjct: 125 RLRVDCPEIELVETYKSHGARITCMRLFPLIDIPLFRGDSQTNEKALVTSSADRTVRLCW 184
Query: 183 KGGPLRCFKGHSGPVLSLADTLLGDSGSKFLASGGEDCTVRL 308
KG RCF+GHSGPV +L+D LLGD K LASGGEDCTVRL
Sbjct: 185 KGHS-RCFRGHSGPVTALSDKLLGDGEFKLLASGGEDCTVRL 225
>gb|EEC70075.1| hypothetical protein OsI_00688 [Oryza sativa Indica Group]
Length = 512
Score = 124 bits (311), Expect = 1e-26
Identities = 61/102 (59%), Positives = 74/102 (72%)
Frame = +3
Query: 3 RIRVDFAGIHLEEAFMAHGARITCMRLFPIVETSLFRNGMHPMDNFIVTSSSDHTIRLRW 182
R+RVD I L E + +HGARITCMRLFP+++ LFR + +VTSS+D T+RL W
Sbjct: 125 RLRVDCPEIELVETYKSHGARITCMRLFPLIDIPLFRGDSQTNEKALVTSSADRTVRLCW 184
Query: 183 KGGPLRCFKGHSGPVLSLADTLLGDSGSKFLASGGEDCTVRL 308
KG RCF+GHSGPV +L+D LLGD K LASGGEDCTVRL
Sbjct: 185 KGHS-RCFRGHSGPVTALSDKLLGDGEFKLLASGGEDCTVRL 225
>ref|XP_002324039.2| hypothetical protein POPTR_0017s11520g [Populus trichocarpa]
gi|550320053|gb|EEF04172.2| hypothetical protein
POPTR_0017s11520g [Populus trichocarpa]
Length = 371
Score = 119 bits (298), Expect = 4e-25
Identities = 58/89 (65%), Positives = 68/89 (76%)
Frame = +3
Query: 42 AFMAHGARITCMRLFPIVETSLFRNGMHPMDNFIVTSSSDHTIRLRWKGGPLRCFKGHSG 221
A H ARITCMRLFP+ ETSLFR+ +N +VTSS DH+IRL WKG RCF+GH+G
Sbjct: 16 ALSDHNARITCMRLFPLSETSLFRSETQRKENVLVTSSCDHSIRLWWKGSCQRCFRGHNG 75
Query: 222 PVLSLADTLLGDSGSKFLASGGEDCTVRL 308
PVL+L+D LLGD +K LASGGED TVRL
Sbjct: 76 PVLTLSDKLLGDGSAKVLASGGEDGTVRL 104
>dbj|BAJ95322.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 482
Score = 118 bits (295), Expect = 9e-25
Identities = 54/102 (52%), Positives = 74/102 (72%)
Frame = +3
Query: 3 RIRVDFAGIHLEEAFMAHGARITCMRLFPIVETSLFRNGMHPMDNFIVTSSSDHTIRLRW 182
R+R+ + L E + +H A+ITCMRLFP+++T L+R+ H + +VTSS+D T+RL W
Sbjct: 123 RLRISILDMELVECYKSHSAKITCMRLFPLIDTPLYRSDAHRNEKALVTSSTDRTVRLCW 182
Query: 183 KGGPLRCFKGHSGPVLSLADTLLGDSGSKFLASGGEDCTVRL 308
K G RC+KGHSGPV ++AD LL D K LA+GGEDCT+RL
Sbjct: 183 K-GQSRCYKGHSGPVTAVADKLLDDGEFKILATGGEDCTIRL 223
>ref|XP_006482547.1| PREDICTED: F-box/WD repeat-containing protein sel-10-like [Citrus
sinensis]
Length = 501
Score = 117 bits (293), Expect = 2e-24
Identities = 57/85 (67%), Positives = 65/85 (76%)
Frame = +3
Query: 54 HGARITCMRLFPIVETSLFRNGMHPMDNFIVTSSSDHTIRLRWKGGPLRCFKGHSGPVLS 233
H ARITCMRLFP+ ETSLFR+ +N +VTSS DH+IRL WKG RCFKGH+GPV +
Sbjct: 152 HKARITCMRLFPLHETSLFRSEPQRTENVLVTSSCDHSIRLWWKGSCQRCFKGHNGPVST 211
Query: 234 LADTLLGDSGSKFLASGGEDCTVRL 308
L+D LLGD K LASGGED TVRL
Sbjct: 212 LSDKLLGDGSGKILASGGEDATVRL 236
>ref|XP_006431092.1| hypothetical protein CICLE_v10011541mg [Citrus clementina]
gi|557533149|gb|ESR44332.1| hypothetical protein
CICLE_v10011541mg [Citrus clementina]
Length = 501
Score = 117 bits (293), Expect = 2e-24
Identities = 57/85 (67%), Positives = 65/85 (76%)
Frame = +3
Query: 54 HGARITCMRLFPIVETSLFRNGMHPMDNFIVTSSSDHTIRLRWKGGPLRCFKGHSGPVLS 233
H ARITCMRLFP+ ETSLFR+ +N +VTSS DH+IRL WKG RCFKGH+GPV +
Sbjct: 152 HKARITCMRLFPLHETSLFRSEPQRTENVLVTSSCDHSIRLWWKGSCQRCFKGHNGPVST 211
Query: 234 LADTLLGDSGSKFLASGGEDCTVRL 308
L+D LLGD K LASGGED TVRL
Sbjct: 212 LSDKLLGDGSGKILASGGEDATVRL 236
>gb|EMJ17998.1| hypothetical protein PRUPE_ppa023545mg, partial [Prunus persica]
Length = 389
Score = 116 bits (290), Expect = 4e-24
Identities = 57/96 (59%), Positives = 69/96 (71%)
Frame = +3
Query: 21 AGIHLEEAFMAHGARITCMRLFPIVETSLFRNGMHPMDNFIVTSSSDHTIRLRWKGGPLR 200
+G++ H ARITCMRLFP+ ETSL+R +N +VTSSSDH+IRL WKG R
Sbjct: 145 SGVNSPVTLSDHNARITCMRLFPLNETSLYRREAQNEENVLVTSSSDHSIRLWWKGSCRR 204
Query: 201 CFKGHSGPVLSLADTLLGDSGSKFLASGGEDCTVRL 308
CF+GHSGPV +L+D LLG+ K LASGGED TVRL
Sbjct: 205 CFRGHSGPVSALSDKLLGNGAGKVLASGGEDGTVRL 240
>ref|XP_006593670.1| PREDICTED: F-box/WD repeat-containing protein sel-10-like [Glycine
max]
Length = 500
Score = 115 bits (287), Expect = 8e-24
Identities = 58/86 (67%), Positives = 67/86 (77%), Gaps = 1/86 (1%)
Frame = +3
Query: 54 HGARITCMRLFPIVE-TSLFRNGMHPMDNFIVTSSSDHTIRLRWKGGPLRCFKGHSGPVL 230
H ARITCMRLFP+ E TS+FR N +VTSS DH+IRL WKG LRCF+GH+GPVL
Sbjct: 152 HKARITCMRLFPLNEMTSVFRGDTQGEQNVLVTSSCDHSIRLWWKGSSLRCFRGHNGPVL 211
Query: 231 SLADTLLGDSGSKFLASGGEDCTVRL 308
SL++ LLG+ GSK LASGGED TVRL
Sbjct: 212 SLSNKLLGEDGSKVLASGGEDGTVRL 237
>ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c [Vitis vinifera]
Length = 494
Score = 114 bits (286), Expect = 1e-23
Identities = 57/97 (58%), Positives = 67/97 (69%)
Frame = +3
Query: 18 FAGIHLEEAFMAHGARITCMRLFPIVETSLFRNGMHPMDNFIVTSSSDHTIRLRWKGGPL 197
F+G H ARITCMRLFP+ ETSLFR+ +N +VTSS DH+IRL WKG
Sbjct: 131 FSGRDFVVTLNDHNARITCMRLFPLSETSLFRSETQREENVLVTSSCDHSIRLWWKGSCQ 190
Query: 198 RCFKGHSGPVLSLADTLLGDSGSKFLASGGEDCTVRL 308
RCF+GH+GPV +L+D LLGD K ASGGED TVRL
Sbjct: 191 RCFRGHNGPVSTLSDKLLGDGSGKVFASGGEDGTVRL 227
>emb|CBI22162.3| unnamed protein product [Vitis vinifera]
Length = 491
Score = 114 bits (286), Expect = 1e-23
Identities = 57/97 (58%), Positives = 67/97 (69%)
Frame = +3
Query: 18 FAGIHLEEAFMAHGARITCMRLFPIVETSLFRNGMHPMDNFIVTSSSDHTIRLRWKGGPL 197
F+G H ARITCMRLFP+ ETSLFR+ +N +VTSS DH+IRL WKG
Sbjct: 128 FSGRDFVVTLNDHNARITCMRLFPLSETSLFRSETQREENVLVTSSCDHSIRLWWKGSCQ 187
Query: 198 RCFKGHSGPVLSLADTLLGDSGSKFLASGGEDCTVRL 308
RCF+GH+GPV +L+D LLGD K ASGGED TVRL
Sbjct: 188 RCFRGHNGPVSTLSDKLLGDGSGKVFASGGEDGTVRL 224
>emb|CAN79923.1| hypothetical protein VITISV_042443 [Vitis vinifera]
Length = 491
Score = 114 bits (286), Expect = 1e-23
Identities = 57/97 (58%), Positives = 67/97 (69%)
Frame = +3
Query: 18 FAGIHLEEAFMAHGARITCMRLFPIVETSLFRNGMHPMDNFIVTSSSDHTIRLRWKGGPL 197
F+G H ARITCMRLFP+ ETSLFR+ +N +VTSS DH+IRL WKG
Sbjct: 128 FSGRDFVVTLNDHNARITCMRLFPLSETSLFRSETQREENVLVTSSCDHSIRLWWKGSCQ 187
Query: 198 RCFKGHSGPVLSLADTLLGDSGSKFLASGGEDCTVRL 308
RCF+GH+GPV +L+D LLGD K ASGGED TVRL
Sbjct: 188 RCFRGHNGPVSTLSDKLLGDGSGKVFASGGEDGTVRL 224
>gb|EXC32622.1| TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L [Morus notabilis]
Length = 511
Score = 114 bits (284), Expect = 2e-23
Identities = 58/85 (68%), Positives = 64/85 (75%)
Frame = +3
Query: 54 HGARITCMRLFPIVETSLFRNGMHPMDNFIVTSSSDHTIRLRWKGGPLRCFKGHSGPVLS 233
H ARIT MRLFP+ ETSLFR+ DNF+VTSS D +IRL WKG RCFKGHSGPV +
Sbjct: 155 HNARITSMRLFPLNETSLFRSESQRNDNFLVTSSCDRSIRLWWKGSCQRCFKGHSGPVSA 214
Query: 234 LADTLLGDSGSKFLASGGEDCTVRL 308
L+D LLGD K LASGGED TVRL
Sbjct: 215 LSDKLLGDGVGKVLASGGEDGTVRL 239
>ref|NP_001158923.1| uncharacterized protein LOC100303822 [Zea mays]
gi|194708122|gb|ACF88145.1| unknown [Zea mays]
Length = 486
Score = 112 bits (281), Expect = 4e-23
Identities = 55/102 (53%), Positives = 70/102 (68%)
Frame = +3
Query: 3 RIRVDFAGIHLEEAFMAHGARITCMRLFPIVETSLFRNGMHPMDNFIVTSSSDHTIRLRW 182
++ +D + E H ARITC+RLFP+++T LFR+ + +VTSS+D TIRL W
Sbjct: 122 KLNIDLPETEIVETHRNHSARITCLRLFPLIDTPLFRSDTQKNEKALVTSSTDRTIRLCW 181
Query: 183 KGGPLRCFKGHSGPVLSLADTLLGDSGSKFLASGGEDCTVRL 308
KG RC+KGHS PV +LAD LL D SK LASGGEDCT+RL
Sbjct: 182 KGYS-RCYKGHSAPVTALADRLLMDGESKLLASGGEDCTIRL 222
>gb|EOY03388.1| F-box family protein [Theobroma cacao]
Length = 495
Score = 111 bits (277), Expect = 1e-22
Identities = 54/85 (63%), Positives = 65/85 (76%)
Frame = +3
Query: 54 HGARITCMRLFPIVETSLFRNGMHPMDNFIVTSSSDHTIRLRWKGGPLRCFKGHSGPVLS 233
H ARITCMRLFP+ ETSL R+ +N +VTSS DH+IRL WKG RCF+GH+G V +
Sbjct: 144 HNARITCMRLFPLRETSLVRSETQREENVLVTSSYDHSIRLWWKGACQRCFRGHNGAVST 203
Query: 234 LADTLLGDSGSKFLASGGEDCTVRL 308
L+D LLGD G+K +ASGGED TVRL
Sbjct: 204 LSDKLLGDGGAKVMASGGEDGTVRL 228
>ref|XP_003564557.1| PREDICTED: ribosome assembly protein C18.05c-like [Brachypodium
distachyon]
Length = 490
Score = 109 bits (273), Expect = 3e-22
Identities = 53/92 (57%), Positives = 67/92 (72%)
Frame = +3
Query: 33 LEEAFMAHGARITCMRLFPIVETSLFRNGMHPMDNFIVTSSSDHTIRLRWKGGPLRCFKG 212
L E + +H ARITCMRLFP+++T LFR+ H + +VTSS+D T+RL WKG R +KG
Sbjct: 137 LVETYRSHSARITCMRLFPLIDTPLFRSDTHTKEKALVTSSTDRTVRLCWKGCS-RSYKG 195
Query: 213 HSGPVLSLADTLLGDSGSKFLASGGEDCTVRL 308
HSGPV +LAD LL D K LA+GGEDC +RL
Sbjct: 196 HSGPVTALADKLLCDGEFKVLATGGEDCAIRL 227
>gb|ESW23198.1| hypothetical protein PHAVU_004G026700g [Phaseolus vulgaris]
gi|561024514|gb|ESW23199.1| hypothetical protein
PHAVU_004G026700g [Phaseolus vulgaris]
gi|561024515|gb|ESW23200.1| hypothetical protein
PHAVU_004G026700g [Phaseolus vulgaris]
Length = 494
Score = 108 bits (270), Expect = 7e-22
Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +3
Query: 54 HGARITCMRLFPIVE-TSLFRNGMHPMDNFIVTSSSDHTIRLRWKGGPLRCFKGHSGPVL 230
H ARITCMRLFP+ E TS FR + +VTSS DH+IRL WKG LRCFKGH+GPVL
Sbjct: 149 HKARITCMRLFPLNEVTSQFRGKTLEEQSVLVTSSCDHSIRLWWKGSSLRCFKGHNGPVL 208
Query: 231 SLADTLLGDSGSKFLASGGEDCTVRL 308
SL++ LLG+ S+ LASGGED TVRL
Sbjct: 209 SLSNKLLGEGSSRVLASGGEDGTVRL 234
>ref|XP_002457213.1| hypothetical protein SORBIDRAFT_03g003380 [Sorghum bicolor]
gi|241929188|gb|EES02333.1| hypothetical protein
SORBIDRAFT_03g003380 [Sorghum bicolor]
Length = 487
Score = 107 bits (266), Expect = 2e-21
Identities = 53/102 (51%), Positives = 70/102 (68%)
Frame = +3
Query: 3 RIRVDFAGIHLEEAFMAHGARITCMRLFPIVETSLFRNGMHPMDNFIVTSSSDHTIRLRW 182
++ +++ + E H ARITC+RLF +++T LFR+ + +VTSS+D TIRL W
Sbjct: 122 KLNINWPETEMTENHRNHSARITCLRLFSLIDTPLFRSDTQKNEKALVTSSTDRTIRLCW 181
Query: 183 KGGPLRCFKGHSGPVLSLADTLLGDSGSKFLASGGEDCTVRL 308
KG RC+KGHS PV +LAD LL D SK LASGGEDCT+RL
Sbjct: 182 KGYS-RCYKGHSAPVTALADRLLIDGESKVLASGGEDCTIRL 222
>ref|XP_004968486.1| PREDICTED: nuclear distribution protein nudF 2-like [Setaria
italica]
Length = 482
Score = 104 bits (259), Expect = 1e-20
Identities = 53/102 (51%), Positives = 67/102 (65%)
Frame = +3
Query: 3 RIRVDFAGIHLEEAFMAHGARITCMRLFPIVETSLFRNGMHPMDNFIVTSSSDHTIRLRW 182
++ D+ + E H ARITCMR F +++T LFR+ + +VTSS+D TIRL W
Sbjct: 121 KLSFDWPVSEVVETHRNHSARITCMRSFSLIDTPLFRSDTQKNEKALVTSSTDRTIRLCW 180
Query: 183 KGGPLRCFKGHSGPVLSLADTLLGDSGSKFLASGGEDCTVRL 308
KG RC+KGHS PV +L D LL D SK LASGGEDCT+RL
Sbjct: 181 KGHS-RCYKGHSAPVTALVDKLLVDGESKVLASGGEDCTIRL 221