BLASTX nr result

ID: Zingiber25_contig00041479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00041479
         (405 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006395120.1| hypothetical protein EUTSA_v10004871mg [Eutr...    60   2e-07

>ref|XP_006395120.1| hypothetical protein EUTSA_v10004871mg [Eutrema salsugineum]
           gi|557091759|gb|ESQ32406.1| hypothetical protein
           EUTSA_v10004871mg [Eutrema salsugineum]
          Length = 227

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 44/108 (40%), Positives = 59/108 (54%), Gaps = 12/108 (11%)
 Frame = +3

Query: 117 DSPLA-----YLELRSRRLEKTLSPPHAFKPKDTPPKESSTIK---ANPRISPLNAGTPN 272
           DS LA     YL+LRSRRLEK   PP   +PK  P    S IK   ++ ++  +N+ T  
Sbjct: 46  DSALAADSSCYLQLRSRRLEK---PPSLAEPKQPPRPHKSGIKESGSSAQVDSVNSNTAA 102

Query: 273 SGREGSFRSRNSEK--GCSSVAEVLCAENNMEPESRE--RETTPCSLI 404
           SG     RS N +   G S  AE  C EN+++ ESR   RE TPC+++
Sbjct: 103 SGSVPVARSCNGDDCFGNSVSAEAFCGENSLDFESRHSTRENTPCNVV 150


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