BLASTX nr result

ID: Zingiber25_contig00041407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00041407
         (426 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ95293.1| predicted protein [Hordeum vulgare subsp. vulgare]     59   7e-07
dbj|BAJ86992.1| predicted protein [Hordeum vulgare subsp. vulgare]     58   1e-06
gb|AFW85193.1| putative ARM repeat-containing protein containing...    56   6e-06
tpg|DAA40011.1| TPA: putative ARM repeat-containing protein cont...    55   1e-05

>dbj|BAJ95293.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 522

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 34/66 (51%), Positives = 47/66 (71%)
 Frame = -3

Query: 418 LMQIAESGEGDVRREMAKKVLRAMRGEEDNEYTTSSSAPTFPMGGDSSVVSEGMMSIRRR 239
           LM +AES +G V R+MA++ LRAMRGE+D E   ++S        D+SVVSEGM+S+RR 
Sbjct: 447 LMPVAES-DGGVGRDMARRTLRAMRGEDD-EVALTASGILGREWDDASVVSEGMVSLRRP 504

Query: 238 PNHYNN 221
           P+H +N
Sbjct: 505 PHHRSN 510


>dbj|BAJ86992.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 522

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
 Frame = -3

Query: 424 RVLMQIAESGE-GDVRREMAKKVLRAMRGEEDNEYTTSSSAPTFPMGGD--SSVVSEGMM 254
           + L ++AE G  G VRREMA+K LRAMRG+ D E   + S+     G D   S+VS+G+M
Sbjct: 443 KALRRVAEEGTPGGVRREMARKTLRAMRGDLDEEADLTGSSLECGDGDDCGGSIVSDGLM 502

Query: 253 SIRRRPNHYNNAPRLNSAEF 194
           S RRR      +   N+AEF
Sbjct: 503 SFRRRQREVGASSCGNTAEF 522


>gb|AFW85193.1| putative ARM repeat-containing protein containing family protein
           [Zea mays]
          Length = 508

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/66 (50%), Positives = 42/66 (63%)
 Frame = -3

Query: 418 LMQIAESGEGDVRREMAKKVLRAMRGEEDNEYTTSSSAPTFPMGGDSSVVSEGMMSIRRR 239
           L  +AE G G VRR++A++ LRAMRGE+D E     S        D SVVSEG++SIRR 
Sbjct: 433 LQPVAEGG-GGVRRDLARRTLRAMRGEDD-EAPAMDSGLLGRQWDDGSVVSEGLVSIRRP 490

Query: 238 PNHYNN 221
           P H +N
Sbjct: 491 PPHRSN 496


>tpg|DAA40011.1| TPA: putative ARM repeat-containing protein containing family
           protein [Zea mays]
          Length = 533

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 36/76 (47%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
 Frame = -3

Query: 424 RVLMQIAESGEGDVRREMAKKVLRAMRGEEDN-----EYT---TSSSAPTFPMGGDSSVV 269
           R L ++     G VRREMA+K LRAMRG+ DN     EY    T SSA     GG  S+V
Sbjct: 456 RALRRVVADEGGGVRREMARKTLRAMRGDLDNDDGGTEYNNDLTGSSAECEDCGG--SIV 513

Query: 268 SEGMMSIRRRPNHYNN 221
           S+G+MS RRR     N
Sbjct: 514 SDGLMSFRRRQRELGN 529


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