BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00041340
         (266 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ14805.1| hypothetical protein PRUPE_ppa002332mg [Prunus pe...    69   5e-10
ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containi...    61   1e-07
ref|XP_004233414.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
ref|XP_006344817.1| PREDICTED: pentatricopeptide repeat-containi...    56   4e-06

>gb|EMJ14805.1| hypothetical protein PRUPE_ppa002332mg [Prunus persica]
          Length = 686

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 37/70 (52%), Positives = 45/70 (64%)
 Frame = +3

Query: 42  MTSRLPVWNLPHNVCLRFLDSYIRLGQLDRARDLLDKIPHPHLPSLTILISAFTRRNLPK 221
           M S+LP  N+P ++ LRFL      G L RAR L D+IPHP L + T+LIS  TR   PK
Sbjct: 1   MLSKLPA-NVPSHLSLRFLKICCNSGDLQRARHLFDQIPHPDLRAWTVLISGHTRHGFPK 59

Query: 222 ESIRLYQRLR 251
           ESI+LY  LR
Sbjct: 60  ESIKLYTSLR 69


>ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera] gi|297736133|emb|CBI24171.3| unnamed
           protein product [Vitis vinifera]
          Length = 687

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/70 (47%), Positives = 43/70 (61%)
 Frame = +3

Query: 42  MTSRLPVWNLPHNVCLRFLDSYIRLGQLDRARDLLDKIPHPHLPSLTILISAFTRRNLPK 221
           M S+LP  +LP ++ L+F+  Y   G L RAR L DKIP P LP+ TILISA T+     
Sbjct: 1   MLSKLPT-SLPPHLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSL 59

Query: 222 ESIRLYQRLR 251
           E+I+ Y   R
Sbjct: 60  EAIQYYNDFR 69


>ref|XP_004233414.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Solanum lycopersicum]
          Length = 685

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/73 (42%), Positives = 45/73 (61%)
 Frame = +3

Query: 42  MTSRLPVWNLPHNVCLRFLDSYIRLGQLDRARDLLDKIPHPHLPSLTILISAFTRRNLPK 221
           M S+LP + L  N   +FL +    G + RAR L D+IPHP + S T+LI+A+T+   PK
Sbjct: 1   MLSKLPSFGLTPNS--QFLRALGPSGDIRRARQLFDEIPHPDIRSWTLLITAYTKSGFPK 58

Query: 222 ESIRLYQRLRETK 260
           E++ +Y  LR  K
Sbjct: 59  EALEVYDELRARK 71


>ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 741

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 14/96 (14%)
 Frame = +3

Query: 6   GYDHSPYLL*GHMTSRLPVW--------------NLPHNVCLRFLDSYIRLGQLDRARDL 143
           G+   P+    H T    +W              N+P ++ LR L + + +G   RA+ L
Sbjct: 29  GFVLPPFFSITHSTQSSSIWKQLTSTKVAPSVPTNIPSHLGLRLLKAALNVGDFRRAQQL 88

Query: 144 LDKIPHPHLPSLTILISAFTRRNLPKESIRLYQRLR 251
            D IP P   + + LISAFT R LP E+IRLY  LR
Sbjct: 89  FDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLR 124


>ref|XP_006344817.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Solanum tuberosum]
          Length = 686

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 25/50 (50%), Positives = 35/50 (70%)
 Frame = +3

Query: 117 GQLDRARDLLDKIPHPHLPSLTILISAFTRRNLPKESIRLYQRLRETKDL 266
           G + RAR L D+IPHP + S T+LI+A+T+   PKE++ +Y  LRE K L
Sbjct: 25  GDIRRARQLFDEIPHPDIRSWTLLITAYTKSGFPKEALEVYDELREKKVL 74