BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00041252
         (683 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFM82591.1| polyprotein [Cacao swollen shoot virus]                208   1e-51
emb|CAD59232.1| polyprotein [Cacao swollen shoot virus]               200   3e-49
ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]...   199   5e-49
emb|CAG70342.1| CP, RT, RNaseH and protease polyprotein [Cacao s...   199   7e-49
emb|CAE76628.1| polyprotein [Cacao swollen shoot virus]               199   7e-49
ref|NP_041734.1| polyprotein [Cacao swollen shoot virus] gi|3478...   199   9e-49
emb|CAE81279.1| polyprotein [Cacao swollen shoot virus]               198   1e-48
ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] gi|54035746...   196   7e-48
gb|AFF58899.1| polyprotein, partial [Fig badnavirus 1]                187   3e-45
gb|AER45369.1| polyprotein, partial [Fig badnavirus 1]                187   3e-45
gb|AER45361.1| polyprotein, partial [Fig badnavirus 1]                187   3e-45
gb|AER45327.1| polyprotein, partial [Fig badnavirus 1] gi|354990...   187   3e-45
gb|AER45335.1| polyprotein, partial [Fig badnavirus 1] gi|354990...   187   3e-45
gb|AER45329.1| polyprotein, partial [Fig badnavirus 1] gi|354990...   187   3e-45
gb|AER42640.1| polyprotein, partial [Fig badnavirus 1] gi|381144...   187   3e-45
gb|AER42638.1| polyprotein, partial [Fig badnavirus 1] gi|354832...   187   3e-45
gb|AFF58911.1| polyprotein, partial [Fig badnavirus 1] gi|381144...   186   4e-45
gb|AER45323.1| polyprotein, partial [Fig badnavirus 1] gi|354990...   186   4e-45
gb|AER45353.1| polyprotein, partial [Fig badnavirus 1]                185   1e-44
gb|AER45341.1| polyprotein, partial [Fig badnavirus 1]                185   1e-44

>gb|AFM82591.1| polyprotein [Cacao swollen shoot virus]
          Length = 1872

 Score =  208 bits (530), Expect = 1e-51
 Identities = 112/190 (58%), Positives = 137/190 (72%), Gaps = 9/190 (4%)
 Frame = -2

Query: 544 ISRTSVEQ-PSTTTTL-------LFEDQIREYQRNQRRLHNAQQATRRLGKRLTGG-SVP 392
           +S+T   Q PS TTT+       LFEDQ+R Y+RNQRRL N ++  RR  K LTG  S  
Sbjct: 1   MSQTRTHQMPSVTTTVNEQGEGPLFEDQVRNYRRNQRRLFNLRKKARRAQKALTGSRSRH 60

Query: 391 IHALEQQIDPQVQLRLSI*ERPSIVSVEVLYHSRRDDVHHRIYMHRFEEAILVTEGHQAD 212
              LEQ+IDPQV LRLS+ ER  +V  EVLY SRRD VHHR+Y HR EE+IL   G+Q D
Sbjct: 61  QETLEQEIDPQVTLRLSMQERARLVPAEVLYRSRRDTVHHRVYTHRSEESILCVGGNQVD 120

Query: 211 KTFIQEESFLQLQRSRMQYIHLGVLQVRIQTLHRRKEGTMTLIVFRDNRWEGDQAILASI 32
           +TFIQ  S  +LQR+ M +IH+G+LQVRIQ LHR++EGTM L+VFRDNRW GDQAI A +
Sbjct: 121 RTFIQPSSLERLQRTGMSFIHIGILQVRIQILHRQEEGTMALVVFRDNRWAGDQAIFAQM 180

Query: 31  KVDLTRRSQL 2
           +VDLT+ SQL
Sbjct: 181 EVDLTKGSQL 190


>emb|CAD59232.1| polyprotein [Cacao swollen shoot virus]
          Length = 1839

 Score =  200 bits (509), Expect = 3e-49
 Identities = 102/181 (56%), Positives = 128/181 (70%), Gaps = 8/181 (4%)
 Frame = -2

Query: 520 PSTTTTL--------LFEDQIREYQRNQRRLHNAQQATRRLGKRLTGGSVPIHALEQQID 365
           PS TTT         L+EDQIR+Y+R QRR+ N Q+  RRL + + G       LEQ+ID
Sbjct: 11  PSVTTTTSERNREGPLYEDQIRDYRRGQRRIFNLQRRARRLRRSMMGSRYQ-ETLEQEID 69

Query: 364 PQVQLRLSI*ERPSIVSVEVLYHSRRDDVHHRIYMHRFEEAILVTEGHQADKTFIQEESF 185
           PQ  LRLS+ ER  +V  EVLY SRRD VHHR+Y HR EE++L   G Q D+ FIQ ES 
Sbjct: 70  PQTTLRLSMQERARLVPAEVLYRSRRDTVHHRVYTHRSEESVLCVGGSQVDRAFIQPESL 129

Query: 184 LQLQRSRMQYIHLGVLQVRIQTLHRRKEGTMTLIVFRDNRWEGDQAILASIKVDLTRRSQ 5
            QLQR+ M +IH+G+LQVRIQ LHR++EGTM L+VFRDNRW GDQ+I A +++DLT+ SQ
Sbjct: 130 EQLQRTGMSFIHIGILQVRIQILHRQEEGTMALVVFRDNRWSGDQSIFAQMEIDLTKGSQ 189

Query: 4   L 2
           L
Sbjct: 190 L 190


>ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]
           gi|584388573|gb|AHI90954.1| polyprotein [Hibiscus
           bacilliform virus GD1]
          Length = 1892

 Score =  199 bits (507), Expect = 5e-49
 Identities = 95/174 (54%), Positives = 127/174 (72%)
 Frame = -2

Query: 523 QPSTTTTLLFEDQIREYQRNQRRLHNAQQATRRLGKRLTGGSVPIHALEQQIDPQVQLRL 344
           Q     T LFEDQIR+Y+ +QRR +  Q+A RRL +R+TG       LEQ++DPQ  L++
Sbjct: 20  QQGERETPLFEDQIRDYRNSQRRAYTTQRAVRRLRRRITGRQPYQETLEQEVDPQADLQM 79

Query: 343 SI*ERPSIVSVEVLYHSRRDDVHHRIYMHRFEEAILVTEGHQADKTFIQEESFLQLQRSR 164
           S+ ER  +V  EVLY SRRD +HHR+Y HR EEAIL T+G+Q D+TFIQ ES   LQR+ 
Sbjct: 80  SMQERARLVPAEVLYRSRRDTIHHRVYSHRSEEAILCTDGNQVDRTFIQPESMEALQRTG 139

Query: 163 MQYIHLGVLQVRIQTLHRRKEGTMTLIVFRDNRWEGDQAILASIKVDLTRRSQL 2
           + +IH+G++QVR+Q LHR+ EGTM L+VFRD RW GDQ+I A+++VDLT   Q+
Sbjct: 140 ISFIHIGIMQVRLQILHRQNEGTMALVVFRDTRWNGDQSIFATMEVDLTEGRQI 193


>emb|CAG70342.1| CP, RT, RNaseH and protease polyprotein [Cacao swollen shoot virus]
          Length = 1868

 Score =  199 bits (506), Expect = 7e-49
 Identities = 102/187 (54%), Positives = 132/187 (70%), Gaps = 7/187 (3%)
 Frame = -2

Query: 541 SRTSVEQPSTTTTL-------LFEDQIREYQRNQRRLHNAQQATRRLGKRLTGGSVPIHA 383
           +RT    PS T+T        L+EDQIR+Y+R QRR+ N ++  RRL + +TG       
Sbjct: 4   ARTQHSVPSVTSTSEQQREGPLYEDQIRDYRRGQRRIFNLRRQARRLRRSVTGSRYQ-ET 62

Query: 382 LEQQIDPQVQLRLSI*ERPSIVSVEVLYHSRRDDVHHRIYMHRFEEAILVTEGHQADKTF 203
           LEQ+IDPQ  LRLS+ ER  +V  EVLY SRRD VHHR+Y HR EE++L    +Q D+ F
Sbjct: 63  LEQEIDPQTTLRLSMQERARLVPAEVLYRSRRDTVHHRVYTHRSEESVLCIGNNQVDRAF 122

Query: 202 IQEESFLQLQRSRMQYIHLGVLQVRIQTLHRRKEGTMTLIVFRDNRWEGDQAILASIKVD 23
           IQ ES  QLQR+ M +IH+G+LQVRIQ LHR++EGTM L+VFRDNRW GDQ+I A +++D
Sbjct: 123 IQPESLEQLQRTGMSFIHIGILQVRIQILHRQEEGTMALVVFRDNRWTGDQSIFAQMEID 182

Query: 22  LTRRSQL 2
           LT+ SQL
Sbjct: 183 LTKGSQL 189


>emb|CAE76628.1| polyprotein [Cacao swollen shoot virus]
          Length = 1847

 Score =  199 bits (506), Expect = 7e-49
 Identities = 100/181 (55%), Positives = 131/181 (72%), Gaps = 8/181 (4%)
 Frame = -2

Query: 520 PSTTTTL--------LFEDQIREYQRNQRRLHNAQQATRRLGKRLTGGSVPIHALEQQID 365
           PS T+T+        L+EDQIR+Y+R+QRR+ N ++  RRL + + G       LEQ+ID
Sbjct: 11  PSVTSTISEQNREGPLYEDQIRDYRRSQRRIFNLRRNARRLRRSMMGSRYQ-ETLEQEID 69

Query: 364 PQVQLRLSI*ERPSIVSVEVLYHSRRDDVHHRIYMHRFEEAILVTEGHQADKTFIQEESF 185
           PQ  LRLS+ ER  +V  EVLY SRRD VHHR+Y HR EE++L   G+Q D+ FIQ ES 
Sbjct: 70  PQTTLRLSMQERARLVPAEVLYRSRRDTVHHRVYTHRSEESVLCVGGNQVDRAFIQPESL 129

Query: 184 LQLQRSRMQYIHLGVLQVRIQTLHRRKEGTMTLIVFRDNRWEGDQAILASIKVDLTRRSQ 5
            QLQR+ M +IH+G+LQVRIQ LHR++EGTM L+VFRDNRW GDQ+I A +++DLT+ SQ
Sbjct: 130 EQLQRTGMSFIHIGILQVRIQILHRQEEGTMALVVFRDNRWSGDQSIFAQMEIDLTKGSQ 189

Query: 4   L 2
           L
Sbjct: 190 L 190


>ref|NP_041734.1| polyprotein [Cacao swollen shoot virus] gi|347871|gb|AAA03171.1|
           polyprotein [Cacao swollen shoot virus]
          Length = 1834

 Score =  199 bits (505), Expect = 9e-49
 Identities = 101/181 (55%), Positives = 128/181 (70%), Gaps = 8/181 (4%)
 Frame = -2

Query: 520 PSTTTTL--------LFEDQIREYQRNQRRLHNAQQATRRLGKRLTGGSVPIHALEQQID 365
           PS TTT         L+EDQIR+Y+R QRR+ N ++  RRL + + G       LEQ+ID
Sbjct: 11  PSVTTTTSEQNREGPLYEDQIRDYRRGQRRIFNLRRRARRLRRSMMGSRYQ-ETLEQEID 69

Query: 364 PQVQLRLSI*ERPSIVSVEVLYHSRRDDVHHRIYMHRFEEAILVTEGHQADKTFIQEESF 185
           PQ  LRLS+ ER  +V  EVLY SRRD VHHR+Y HR EE++L   G Q D+ FIQ ES 
Sbjct: 70  PQTTLRLSMQERARLVPAEVLYRSRRDTVHHRVYTHRSEESVLCVGGSQVDRAFIQPESL 129

Query: 184 LQLQRSRMQYIHLGVLQVRIQTLHRRKEGTMTLIVFRDNRWEGDQAILASIKVDLTRRSQ 5
            QLQR+ M +IH+G+LQVRIQ LHR++EGTM L+VFRDNRW GDQ+I A +++DLT+ SQ
Sbjct: 130 EQLQRTGMSFIHIGILQVRIQILHRQEEGTMALVVFRDNRWSGDQSIFAQMEIDLTKGSQ 189

Query: 4   L 2
           L
Sbjct: 190 L 190


>emb|CAE81279.1| polyprotein [Cacao swollen shoot virus]
          Length = 1816

 Score =  198 bits (504), Expect = 1e-48
 Identities = 100/181 (55%), Positives = 130/181 (71%), Gaps = 8/181 (4%)
 Frame = -2

Query: 520 PSTTTTL--------LFEDQIREYQRNQRRLHNAQQATRRLGKRLTGGSVPIHALEQQID 365
           PS T+T         L+EDQIR+Y+R+QRR+ N ++  RRL + + G       LEQ+ID
Sbjct: 11  PSVTSTTSEQNREGPLYEDQIRDYRRSQRRIFNLRRRARRLRRSMMGSRYQ-ETLEQEID 69

Query: 364 PQVQLRLSI*ERPSIVSVEVLYHSRRDDVHHRIYMHRFEEAILVTEGHQADKTFIQEESF 185
           PQ  LRLS+ ER  +V  EVLY SRRD VHHR+Y HR EE++L   G+Q D+ FIQ ES 
Sbjct: 70  PQTTLRLSMQERARLVPAEVLYRSRRDTVHHRVYTHRSEESVLCVGGNQVDRAFIQPESL 129

Query: 184 LQLQRSRMQYIHLGVLQVRIQTLHRRKEGTMTLIVFRDNRWEGDQAILASIKVDLTRRSQ 5
            QLQR+ M +IH+G+LQVRIQ LHR++EGTM L+VFRDNRW GDQ+I A +++DLT+ SQ
Sbjct: 130 EQLQRTGMSFIHIGILQVRIQILHRQEEGTMALVVFRDNRWSGDQSIFAQMEIDLTKGSQ 189

Query: 4   L 2
           L
Sbjct: 190 L 190


>ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] gi|540357465|gb|AGV08293.1| ORF3
           [Piper yellow mottle virus]
          Length = 1925

 Score =  196 bits (497), Expect = 7e-48
 Identities = 96/168 (57%), Positives = 132/168 (78%), Gaps = 2/168 (1%)
 Frame = -2

Query: 499 LFEDQIREYQRNQRRLHNAQQATRRL--GKRLTGGSVPIHALEQQIDPQVQLRLSI*ERP 326
           L EDQI +Y++NQRR+HN +QA RRL   +  T G      +EQ +DPQ QL  S+ +R 
Sbjct: 9   LVEDQITQYRQNQRRMHNLRQAVRRLTNSQASTSGQ---EIIEQSLDPQKQLMRSMTQRA 65

Query: 325 SIVSVEVLYHSRRDDVHHRIYMHRFEEAILVTEGHQADKTFIQEESFLQLQRSRMQYIHL 146
           SIV  EVLYHSR+DDV+H++Y+HR EEA+ VTEG+Q D+TFIQEES  +L +S +++IHL
Sbjct: 66  SIVPAEVLYHSRKDDVNHKVYIHRSEEALSVTEGNQVDRTFIQEESHKKLVKSGIKFIHL 125

Query: 145 GVLQVRIQTLHRRKEGTMTLIVFRDNRWEGDQAILASIKVDLTRRSQL 2
           GVLQVR+Q LHR++EGT+ L+VFRDNRW+GD+ I+A+++VDLT+  Q+
Sbjct: 126 GVLQVRLQILHRKEEGTLALVVFRDNRWKGDKGIIATMEVDLTKGCQM 173


>gb|AFF58899.1| polyprotein, partial [Fig badnavirus 1]
          Length = 197

 Score =  187 bits (475), Expect = 3e-45
 Identities = 99/166 (59%), Positives = 123/166 (74%)
 Frame = -2

Query: 499 LFEDQIREYQRNQRRLHNAQQATRRLGKRLTGGSVPIHALEQQIDPQVQLRLSI*ERPSI 320
           LFEDQIR+Y+RNQRR   A+QA RR   R+ G       LEQ +DP+V+L  S+ ER ++
Sbjct: 28  LFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYN-QTLEQIVDPEVELNQSMQERANL 86

Query: 319 VSVEVLYHSRRDDVHHRIYMHRFEEAILVTEGHQADKTFIQEESFLQLQRSRMQYIHLGV 140
           V  EVLY SRRD+++H+IY HR EEA+L   G Q D+ FIQ  SF +LQRS MQ+IHLGV
Sbjct: 87  VPAEVLYRSRRDNINHQIYNHRSEEAMLCV-GEQQDRMFIQPNSFQELQRSGMQFIHLGV 145

Query: 139 LQVRIQTLHRRKEGTMTLIVFRDNRWEGDQAILASIKVDLTRRSQL 2
           LQVR+Q LHR  EGTM L+VFRDNRW+GDQ+I A  +VDLTR SQ+
Sbjct: 146 LQVRLQILHRADEGTMALVVFRDNRWQGDQSIFAISEVDLTRGSQI 191


>gb|AER45369.1| polyprotein, partial [Fig badnavirus 1]
          Length = 198

 Score =  187 bits (475), Expect = 3e-45
 Identities = 98/166 (59%), Positives = 123/166 (74%)
 Frame = -2

Query: 499 LFEDQIREYQRNQRRLHNAQQATRRLGKRLTGGSVPIHALEQQIDPQVQLRLSI*ERPSI 320
           LFEDQIR+Y+RNQRR   A+QA RR   R+ G       LEQ +DP+V+L  S+ ER ++
Sbjct: 28  LFEDQIRDYRRNQRRRFVAEQAVRRTTGRMRGRRYN-QTLEQIVDPEVELNQSMQERANL 86

Query: 319 VSVEVLYHSRRDDVHHRIYMHRFEEAILVTEGHQADKTFIQEESFLQLQRSRMQYIHLGV 140
           V  EVLY SRRD+++H++Y HR EEA+L   G Q D+ FIQ  SF +LQRS MQ+IHLGV
Sbjct: 87  VPAEVLYRSRRDNINHQVYNHRSEEAMLCV-GEQQDRMFIQPNSFQELQRSGMQFIHLGV 145

Query: 139 LQVRIQTLHRRKEGTMTLIVFRDNRWEGDQAILASIKVDLTRRSQL 2
           LQVR+Q LHR  EGTM L+VFRDNRW+GDQ+I A  +VDLTR SQ+
Sbjct: 146 LQVRLQILHRTDEGTMALVVFRDNRWQGDQSIFAISEVDLTRGSQI 191


>gb|AER45361.1| polyprotein, partial [Fig badnavirus 1]
          Length = 198

 Score =  187 bits (475), Expect = 3e-45
 Identities = 98/166 (59%), Positives = 123/166 (74%)
 Frame = -2

Query: 499 LFEDQIREYQRNQRRLHNAQQATRRLGKRLTGGSVPIHALEQQIDPQVQLRLSI*ERPSI 320
           LFEDQIR+Y+RNQRR   A+QA RR   R+ G       LEQ +DP+V+L  S+ ER ++
Sbjct: 28  LFEDQIRDYRRNQRRRFVAEQAVRRTTGRMRGRRYN-QTLEQIVDPEVELNQSMQERANL 86

Query: 319 VSVEVLYHSRRDDVHHRIYMHRFEEAILVTEGHQADKTFIQEESFLQLQRSRMQYIHLGV 140
           V  EVLY SRRD+++H++Y HR EEA+L   G Q D+ FIQ  SF +LQRS MQ+IHLGV
Sbjct: 87  VPAEVLYRSRRDNINHQVYNHRSEEAMLCV-GEQQDRMFIQPNSFQELQRSGMQFIHLGV 145

Query: 139 LQVRIQTLHRRKEGTMTLIVFRDNRWEGDQAILASIKVDLTRRSQL 2
           LQVR+Q LHR  EGTM L+VFRDNRW+GDQ+I A  +VDLTR SQ+
Sbjct: 146 LQVRLQILHRADEGTMALVVFRDNRWQGDQSIFAISEVDLTRGSQI 191


>gb|AER45327.1| polyprotein, partial [Fig badnavirus 1] gi|354990585|gb|AER45337.1|
           polyprotein, partial [Fig badnavirus 1]
          Length = 198

 Score =  187 bits (475), Expect = 3e-45
 Identities = 99/166 (59%), Positives = 123/166 (74%)
 Frame = -2

Query: 499 LFEDQIREYQRNQRRLHNAQQATRRLGKRLTGGSVPIHALEQQIDPQVQLRLSI*ERPSI 320
           LFEDQIR+Y+RNQRR   A+QA RR   R+ G       LEQ +DP+V+L  S+ ER ++
Sbjct: 28  LFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYN-QTLEQIVDPEVELNQSMQERANL 86

Query: 319 VSVEVLYHSRRDDVHHRIYMHRFEEAILVTEGHQADKTFIQEESFLQLQRSRMQYIHLGV 140
           V  EVLY SRRD+++H+IY HR EEA+L   G Q D+ FIQ  SF +LQRS MQ+IHLGV
Sbjct: 87  VPAEVLYRSRRDNINHQIYNHRSEEAMLCV-GEQQDRMFIQPNSFQELQRSGMQFIHLGV 145

Query: 139 LQVRIQTLHRRKEGTMTLIVFRDNRWEGDQAILASIKVDLTRRSQL 2
           LQVR+Q LHR  EGTM L+VFRDNRW+GDQ+I A  +VDLTR SQ+
Sbjct: 146 LQVRLQILHRADEGTMALVVFRDNRWQGDQSIFAISEVDLTRGSQI 191


>gb|AER45335.1| polyprotein, partial [Fig badnavirus 1] gi|354990615|gb|AER45357.1|
           polyprotein, partial [Fig badnavirus 1]
           gi|354990618|gb|AER45359.1| polyprotein, partial [Fig
           badnavirus 1] gi|354990630|gb|AER45367.1| polyprotein,
           partial [Fig badnavirus 1] gi|354990636|gb|AER45371.1|
           polyprotein, partial [Fig badnavirus 1]
          Length = 198

 Score =  187 bits (474), Expect = 3e-45
 Identities = 98/166 (59%), Positives = 123/166 (74%)
 Frame = -2

Query: 499 LFEDQIREYQRNQRRLHNAQQATRRLGKRLTGGSVPIHALEQQIDPQVQLRLSI*ERPSI 320
           LFEDQIR+Y+RNQRR   A+QA RR   R+ G       LEQ +DP+V+L  S+ ER ++
Sbjct: 28  LFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYN-QTLEQIVDPEVELNQSMQERANL 86

Query: 319 VSVEVLYHSRRDDVHHRIYMHRFEEAILVTEGHQADKTFIQEESFLQLQRSRMQYIHLGV 140
           V  EVLY SRRD+++H++Y HR EEA+L   G Q D+ FIQ  SF +LQRS MQ+IHLGV
Sbjct: 87  VPAEVLYRSRRDNINHQVYNHRSEEAMLCV-GEQQDRMFIQPNSFQELQRSGMQFIHLGV 145

Query: 139 LQVRIQTLHRRKEGTMTLIVFRDNRWEGDQAILASIKVDLTRRSQL 2
           LQVR+Q LHR  EGTM L+VFRDNRW+GDQ+I A  +VDLTR SQ+
Sbjct: 146 LQVRLQILHRTDEGTMALVVFRDNRWQGDQSIFAISEVDLTRGSQI 191


>gb|AER45329.1| polyprotein, partial [Fig badnavirus 1] gi|354990579|gb|AER45333.1|
           polyprotein, partial [Fig badnavirus 1]
           gi|354990594|gb|AER45343.1| polyprotein, partial [Fig
           badnavirus 1] gi|354990597|gb|AER45345.1| polyprotein,
           partial [Fig badnavirus 1] gi|354990600|gb|AER45347.1|
           polyprotein, partial [Fig badnavirus 1]
           gi|354990606|gb|AER45351.1| polyprotein, partial [Fig
           badnavirus 1] gi|354990612|gb|AER45355.1| polyprotein,
           partial [Fig badnavirus 1] gi|354990624|gb|AER45363.1|
           polyprotein, partial [Fig badnavirus 1]
           gi|354990627|gb|AER45365.1| polyprotein, partial [Fig
           badnavirus 1]
          Length = 198

 Score =  187 bits (474), Expect = 3e-45
 Identities = 98/166 (59%), Positives = 123/166 (74%)
 Frame = -2

Query: 499 LFEDQIREYQRNQRRLHNAQQATRRLGKRLTGGSVPIHALEQQIDPQVQLRLSI*ERPSI 320
           LFEDQIR+Y+RNQRR   A+QA RR   R+ G       LEQ +DP+V+L  S+ ER ++
Sbjct: 28  LFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYN-QTLEQIVDPEVELNQSMQERANL 86

Query: 319 VSVEVLYHSRRDDVHHRIYMHRFEEAILVTEGHQADKTFIQEESFLQLQRSRMQYIHLGV 140
           V  EVLY SRRD+++H++Y HR EEA+L   G Q D+ FIQ  SF +LQRS MQ+IHLGV
Sbjct: 87  VPAEVLYRSRRDNINHQVYNHRSEEAMLCV-GEQQDRMFIQPNSFQELQRSGMQFIHLGV 145

Query: 139 LQVRIQTLHRRKEGTMTLIVFRDNRWEGDQAILASIKVDLTRRSQL 2
           LQVR+Q LHR  EGTM L+VFRDNRW+GDQ+I A  +VDLTR SQ+
Sbjct: 146 LQVRLQILHRADEGTMALVVFRDNRWQGDQSIFAISEVDLTRGSQI 191


>gb|AER42640.1| polyprotein, partial [Fig badnavirus 1] gi|381144400|gb|AFF58905.1|
           polyprotein, partial [Fig badnavirus 1]
           gi|381144403|gb|AFF58907.1| polyprotein, partial [Fig
           badnavirus 1] gi|381144406|gb|AFF58909.1| polyprotein,
           partial [Fig badnavirus 1]
          Length = 197

 Score =  187 bits (474), Expect = 3e-45
 Identities = 98/166 (59%), Positives = 123/166 (74%)
 Frame = -2

Query: 499 LFEDQIREYQRNQRRLHNAQQATRRLGKRLTGGSVPIHALEQQIDPQVQLRLSI*ERPSI 320
           LFEDQIR+Y+RNQRR   A+QA RR   R+ G       LEQ +DP+V+L  S+ ER ++
Sbjct: 28  LFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYN-QTLEQIVDPEVELNQSMQERANL 86

Query: 319 VSVEVLYHSRRDDVHHRIYMHRFEEAILVTEGHQADKTFIQEESFLQLQRSRMQYIHLGV 140
           V  EVLY SRRD+++H++Y HR EEA+L   G Q D+ FIQ  SF +LQRS MQ+IHLGV
Sbjct: 87  VPAEVLYRSRRDNINHQVYNHRSEEAMLCV-GEQQDRMFIQPNSFQELQRSGMQFIHLGV 145

Query: 139 LQVRIQTLHRRKEGTMTLIVFRDNRWEGDQAILASIKVDLTRRSQL 2
           LQVR+Q LHR  EGTM L+VFRDNRW+GDQ+I A  +VDLTR SQ+
Sbjct: 146 LQVRLQILHRADEGTMALVVFRDNRWQGDQSIFAISEVDLTRGSQI 191


>gb|AER42638.1| polyprotein, partial [Fig badnavirus 1] gi|354832288|gb|AER42644.1|
           polyprotein, partial [Fig badnavirus 1]
           gi|354832291|gb|AER42646.1| polyprotein, partial [Fig
           badnavirus 1] gi|381144394|gb|AFF58901.1| polyprotein,
           partial [Fig badnavirus 1] gi|381144397|gb|AFF58903.1|
           polyprotein, partial [Fig badnavirus 1]
          Length = 197

 Score =  187 bits (474), Expect = 3e-45
 Identities = 98/166 (59%), Positives = 123/166 (74%)
 Frame = -2

Query: 499 LFEDQIREYQRNQRRLHNAQQATRRLGKRLTGGSVPIHALEQQIDPQVQLRLSI*ERPSI 320
           LFEDQIR+Y+RNQRR   A+QA RR   R+ G       LEQ +DP+V+L  S+ ER ++
Sbjct: 28  LFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYN-QTLEQIVDPEVELNQSMQERANL 86

Query: 319 VSVEVLYHSRRDDVHHRIYMHRFEEAILVTEGHQADKTFIQEESFLQLQRSRMQYIHLGV 140
           V  EVLY SRRD+++H++Y HR EEA+L   G Q D+ FIQ  SF +LQRS MQ+IHLGV
Sbjct: 87  VPAEVLYRSRRDNINHQVYNHRSEEAMLCV-GEQQDRMFIQPNSFQELQRSGMQFIHLGV 145

Query: 139 LQVRIQTLHRRKEGTMTLIVFRDNRWEGDQAILASIKVDLTRRSQL 2
           LQVR+Q LHR  EGTM L+VFRDNRW+GDQ+I A  +VDLTR SQ+
Sbjct: 146 LQVRLQILHRTDEGTMALVVFRDNRWQGDQSIFAISEVDLTRGSQI 191


>gb|AFF58911.1| polyprotein, partial [Fig badnavirus 1] gi|381144412|gb|AFF58913.1|
           polyprotein, partial [Fig badnavirus 1]
           gi|381144415|gb|AFF58915.1| polyprotein, partial [Fig
           badnavirus 1] gi|381144418|gb|AFF58917.1| polyprotein,
           partial [Fig badnavirus 1]
          Length = 197

 Score =  186 bits (473), Expect = 4e-45
 Identities = 97/166 (58%), Positives = 123/166 (74%)
 Frame = -2

Query: 499 LFEDQIREYQRNQRRLHNAQQATRRLGKRLTGGSVPIHALEQQIDPQVQLRLSI*ERPSI 320
           LFEDQIR+Y+RNQRR   A+QA RR   R+ G       LEQ +DP+V+L  S+ ER ++
Sbjct: 28  LFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYN-QTLEQIVDPEVELNQSMQERANL 86

Query: 319 VSVEVLYHSRRDDVHHRIYMHRFEEAILVTEGHQADKTFIQEESFLQLQRSRMQYIHLGV 140
           V  EVLY SRRD+++H++Y HR EEA+L   G Q D+ FIQ  SF +LQRS MQ+IHLGV
Sbjct: 87  VPAEVLYRSRRDNINHQVYNHRSEEAMLCV-GEQQDRMFIQPNSFQELQRSGMQFIHLGV 145

Query: 139 LQVRIQTLHRRKEGTMTLIVFRDNRWEGDQAILASIKVDLTRRSQL 2
           LQVR+Q LHR  EGTM L+VFRDNRW+GDQ+I A  ++DLTR SQ+
Sbjct: 146 LQVRLQILHRADEGTMALVVFRDNRWQGDQSIFAISEIDLTRGSQI 191


>gb|AER45323.1| polyprotein, partial [Fig badnavirus 1] gi|354990567|gb|AER45325.1|
           polyprotein, partial [Fig badnavirus 1]
           gi|354990576|gb|AER45331.1| polyprotein, partial [Fig
           badnavirus 1] gi|354990603|gb|AER45349.1| polyprotein,
           partial [Fig badnavirus 1] gi|354990639|gb|AER45373.1|
           polyprotein, partial [Fig badnavirus 1]
           gi|354990642|gb|AER45375.1| polyprotein, partial [Fig
           badnavirus 1]
          Length = 198

 Score =  186 bits (473), Expect = 4e-45
 Identities = 97/166 (58%), Positives = 123/166 (74%)
 Frame = -2

Query: 499 LFEDQIREYQRNQRRLHNAQQATRRLGKRLTGGSVPIHALEQQIDPQVQLRLSI*ERPSI 320
           LFEDQIR+Y+RNQRR   A+QA RR   R+ G       LEQ +DP+V+L  S+ ER ++
Sbjct: 28  LFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYN-QTLEQIVDPEVELNQSMQERANL 86

Query: 319 VSVEVLYHSRRDDVHHRIYMHRFEEAILVTEGHQADKTFIQEESFLQLQRSRMQYIHLGV 140
           V  EVLY SRRD+++H++Y HR EEA+L   G Q D+ FIQ  SF +LQRS MQ+IHLGV
Sbjct: 87  VPAEVLYRSRRDNINHQVYNHRSEEAMLCV-GEQQDRMFIQPNSFQELQRSGMQFIHLGV 145

Query: 139 LQVRIQTLHRRKEGTMTLIVFRDNRWEGDQAILASIKVDLTRRSQL 2
           LQVR+Q LHR  EGTM L+VFRDNRW+GDQ+I A  ++DLTR SQ+
Sbjct: 146 LQVRLQILHRADEGTMALVVFRDNRWQGDQSIFAISEIDLTRGSQI 191


>gb|AER45353.1| polyprotein, partial [Fig badnavirus 1]
          Length = 198

 Score =  185 bits (470), Expect = 1e-44
 Identities = 97/166 (58%), Positives = 123/166 (74%)
 Frame = -2

Query: 499 LFEDQIREYQRNQRRLHNAQQATRRLGKRLTGGSVPIHALEQQIDPQVQLRLSI*ERPSI 320
           LFEDQIR+Y+RNQRR   A+QA R+   R+ G       LEQ +DP+V+L  S+ ER ++
Sbjct: 28  LFEDQIRDYRRNQRRRFVAEQAVRQTMGRMRGRRYN-QTLEQIVDPEVELNQSMQERANL 86

Query: 319 VSVEVLYHSRRDDVHHRIYMHRFEEAILVTEGHQADKTFIQEESFLQLQRSRMQYIHLGV 140
           V  EVLY SRRD+++H++Y HR EEA+L   G Q D+ FIQ  SF +LQRS MQ+IHLGV
Sbjct: 87  VPAEVLYRSRRDNINHQVYNHRSEEAMLCV-GEQQDRMFIQPNSFQELQRSGMQFIHLGV 145

Query: 139 LQVRIQTLHRRKEGTMTLIVFRDNRWEGDQAILASIKVDLTRRSQL 2
           LQVR+Q LHR  EGTM L+VFRDNRW+GDQ+I A  +VDLTR SQ+
Sbjct: 146 LQVRLQILHRADEGTMALVVFRDNRWQGDQSIFAISEVDLTRGSQI 191


>gb|AER45341.1| polyprotein, partial [Fig badnavirus 1]
          Length = 198

 Score =  185 bits (470), Expect = 1e-44
 Identities = 97/166 (58%), Positives = 123/166 (74%)
 Frame = -2

Query: 499 LFEDQIREYQRNQRRLHNAQQATRRLGKRLTGGSVPIHALEQQIDPQVQLRLSI*ERPSI 320
           LFEDQIR+Y+RNQRR   A+QA RR   R+ G       LEQ +DP+V+L  S+ ER ++
Sbjct: 28  LFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYN-QTLEQIVDPEVELNQSMQERANL 86

Query: 319 VSVEVLYHSRRDDVHHRIYMHRFEEAILVTEGHQADKTFIQEESFLQLQRSRMQYIHLGV 140
           V  EVLY SRRD+++H++Y HR EEA+L   G Q D+ FIQ  SF +L+RS MQ+IHLGV
Sbjct: 87  VPAEVLYRSRRDNINHQVYNHRSEEAMLCV-GEQQDRMFIQPNSFQELKRSGMQFIHLGV 145

Query: 139 LQVRIQTLHRRKEGTMTLIVFRDNRWEGDQAILASIKVDLTRRSQL 2
           LQVR+Q LHR  EGTM L+VFRDNRW+GDQ+I A  +VDLTR SQ+
Sbjct: 146 LQVRLQILHRTDEGTMALVVFRDNRWQGDQSIFAISEVDLTRGSQI 191