BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00041220
         (435 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004952366.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
ref|XP_004952365.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
ref|XP_003566485.1| PREDICTED: pentatricopeptide repeat-containi...    74   3e-11
gb|EMT10234.1| hypothetical protein F775_08466 [Aegilops tauschii]     72   6e-11
ref|XP_002448766.1| hypothetical protein SORBIDRAFT_06g032810 [S...    70   2e-10
ref|XP_004960083.1| PREDICTED: pentatricopeptide repeat-containi...    70   4e-10
ref|NP_001174412.1| Os05g0393900 [Oryza sativa Japonica Group] g...    69   7e-10
gb|EEC79171.1| hypothetical protein OsI_19856 [Oryza sativa Indi...    69   7e-10
gb|EEE63625.1| hypothetical protein OsJ_18442 [Oryza sativa Japo...    69   7e-10
gb|EAZ32399.1| hypothetical protein OsJ_16610 [Oryza sativa Japo...    69   9e-10
emb|CAJ86105.1| H0103C06.9 [Oryza sativa Indica Group] gi|125550...    69   9e-10
ref|NP_001054249.1| Os04g0675600 [Oryza sativa Japonica Group] g...    69   9e-10
ref|XP_006655290.1| PREDICTED: pentatricopeptide repeat-containi...    68   1e-09
ref|XP_004987109.1| PREDICTED: pentatricopeptide repeat-containi...    67   3e-09
gb|EMT22149.1| hypothetical protein F775_03881 [Aegilops tauschii]     67   3e-09
emb|CBG76275.1| OO_Ba0005L10-OO_Ba0081K17.26 [Oryza officinalis]       64   2e-08
ref|NP_001167998.1| hypothetical protein [Zea mays] gi|223945411...    64   2e-08
ref|XP_004962174.1| PREDICTED: pentatricopeptide repeat-containi...    64   3e-08
gb|EMT18207.1| hypothetical protein F775_24182 [Aegilops tauschii]     64   3e-08
tpg|DAA36597.1| TPA: hypothetical protein ZEAMMB73_327514 [Zea m...    62   6e-08

>ref|XP_004952366.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform X2 [Setaria italica]
          Length = 590

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 38/92 (41%), Positives = 57/92 (61%)
 Frame = -2

Query: 428 IVDGLCRSGKFLEAIDFFHMSLEHKFSSDLLLRLIYRLVKNRGLKELLKLFTGIEKRGLF 249
           +VDGLCR GKF +A DFF  SL+++ S DLL  LI RL ++  +  +L  F  IE++G  
Sbjct: 480 MVDGLCRQGKFDQATDFFKESLKNRLSKDLLTALINRLARSNRIGNILVAFEEIERQGFV 539

Query: 248 LDGLIFNSLIKAFCNQGVCQSIDMPSVCIILD 153
            D +IF+  I++FC  G  Q  ++  +  +LD
Sbjct: 540 RDYMIFSDTIRSFCRVGFRQHTNIFDLQFLLD 571


>ref|XP_004952365.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform X1 [Setaria italica]
          Length = 625

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 38/92 (41%), Positives = 57/92 (61%)
 Frame = -2

Query: 428 IVDGLCRSGKFLEAIDFFHMSLEHKFSSDLLLRLIYRLVKNRGLKELLKLFTGIEKRGLF 249
           +VDGLCR GKF +A DFF  SL+++ S DLL  LI RL ++  +  +L  F  IE++G  
Sbjct: 515 MVDGLCRQGKFDQATDFFKESLKNRLSKDLLTALINRLARSNRIGNILVAFEEIERQGFV 574

Query: 248 LDGLIFNSLIKAFCNQGVCQSIDMPSVCIILD 153
            D +IF+  I++FC  G  Q  ++  +  +LD
Sbjct: 575 RDYMIFSDTIRSFCRVGFRQHTNIFDLQFLLD 606


>ref|XP_003566485.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like, partial [Brachypodium distachyon]
          Length = 564

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 40/95 (42%), Positives = 54/95 (56%)
 Frame = -2

Query: 428 IVDGLCRSGKFLEAIDFFHMSLEHKFSSDLLLRLIYRLVKNRGLKELLKLFTGIEKRGLF 249
           I+DGLCR  KF  A   F  SLE   S DLL  LI RL  +  + E+ ++F G+E+ G  
Sbjct: 467 IIDGLCRDEKFDMATSCFLESLERGLSRDLLAVLINRLAHSGKIWEIFRVFQGMEREGFL 526

Query: 248 LDGLIFNSLIKAFCNQGVCQSIDMPSVCIILDKML 144
            D  IF+  I++FC  G C   D+  + +ILD ML
Sbjct: 527 PDNCIFDRTIRSFCRAGFCHDRDIFKLNLILDTML 561


>gb|EMT10234.1| hypothetical protein F775_08466 [Aegilops tauschii]
          Length = 548

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 40/95 (42%), Positives = 51/95 (53%)
 Frame = -2

Query: 428 IVDGLCRSGKFLEAIDFFHMSLEHKFSSDLLLRLIYRLVKNRGLKELLKLFTGIEKRGLF 249
           IVDGLCR G F  A  +F  SLE   S DL   L  RL  N  + E + +F G+E++G  
Sbjct: 451 IVDGLCRDGFFDTATSYFLESLEIGLSRDLFAVLTNRLAHNGKIWETIHIFKGMEEKGFI 510

Query: 248 LDGLIFNSLIKAFCNQGVCQSIDMPSVCIILDKML 144
            D  IF+  I+ FC  G C   DM  +  +LD ML
Sbjct: 511 PDNSIFDLTIRIFCRAGYCHDTDMFKLNFVLDTML 545


>ref|XP_002448766.1| hypothetical protein SORBIDRAFT_06g032810 [Sorghum bicolor]
           gi|241939949|gb|EES13094.1| hypothetical protein
           SORBIDRAFT_06g032810 [Sorghum bicolor]
          Length = 545

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 37/96 (38%), Positives = 62/96 (64%)
 Frame = -2

Query: 431 TIVDGLCRSGKFLEAIDFFHMSLEHKFSSDLLLRLIYRLVKNRGLKELLKLFTGIEKRGL 252
           T+VD L RSG+  +A++F    ++  + ++ +  L Y LV++  ++E L+LF  I+ +GL
Sbjct: 448 TLVDCLFRSGRRSQAVNFVR-HIDGGYPTEPVAHLTYWLVRSGYIREALRLFDDIQIKGL 506

Query: 251 FLDGLIFNSLIKAFCNQGVCQSIDMPSVCIILDKML 144
            LD  IF ++IKAFC +G  +  DM  +C +LD+ML
Sbjct: 507 VLDCRIFANVIKAFCRKGPTECSDMSQLCFVLDRML 542


>ref|XP_004960083.1| PREDICTED: pentatricopeptide repeat-containing protein At1g63080,
           mitochondrial-like [Setaria italica]
          Length = 549

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 38/96 (39%), Positives = 59/96 (61%)
 Frame = -2

Query: 431 TIVDGLCRSGKFLEAIDFFHMSLEHKFSSDLLLRLIYRLVKNRGLKELLKLFTGIEKRGL 252
           T+VD L RSG+  EA +F    ++  + ++ +  L Y LV++    E L+LF  I+ +GL
Sbjct: 452 TLVDCLFRSGRRSEAANFVR-HIDDGYPTEPVAHLTYWLVRSGNTHEALRLFDDIQIKGL 510

Query: 251 FLDGLIFNSLIKAFCNQGVCQSIDMPSVCIILDKML 144
            LD  IF ++IKAFC +G  +  DM  +C +LD+ML
Sbjct: 511 VLDSKIFANVIKAFCRKGPVECSDMSQLCSVLDRML 546


>ref|NP_001174412.1| Os05g0393900 [Oryza sativa Japonica Group]
           gi|255676341|dbj|BAH93140.1| Os05g0393900 [Oryza sativa
           Japonica Group]
          Length = 553

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 37/95 (38%), Positives = 53/95 (55%)
 Frame = -2

Query: 428 IVDGLCRSGKFLEAIDFFHMSLEHKFSSDLLLRLIYRLVKNRGLKELLKLFTGIEKRGLF 249
           ++D LCR  KFL A+  F+ SLE  F     L +I  L+    L +L  L   +  +G  
Sbjct: 456 VIDCLCREEKFLVALCCFYQSLEDDFFPSAFLSIIRGLIVGGMLGQLHTLIGCVLGQGFI 515

Query: 248 LDGLIFNSLIKAFCNQGVCQSIDMPSVCIILDKML 144
           ++  I+  LIKA C  G CQS++M  VC IL++ML
Sbjct: 516 IEVYIYQELIKALCKNGYCQSVEMYKVCHILERML 550


>gb|EEC79171.1| hypothetical protein OsI_19856 [Oryza sativa Indica Group]
          Length = 633

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 37/95 (38%), Positives = 53/95 (55%)
 Frame = -2

Query: 428 IVDGLCRSGKFLEAIDFFHMSLEHKFSSDLLLRLIYRLVKNRGLKELLKLFTGIEKRGLF 249
           ++D LCR  KFL A+  F+ SLE  F     L +I  L+    L +L  L   +  +G  
Sbjct: 536 VIDCLCREEKFLVALCCFYQSLEDDFFPSAFLSIIRGLIVGGMLGQLHTLIGCVLGQGFI 595

Query: 248 LDGLIFNSLIKAFCNQGVCQSIDMPSVCIILDKML 144
           ++  I+  LIKA C  G CQS++M  VC IL++ML
Sbjct: 596 IEVYIYQELIKALCKNGYCQSVEMYKVCHILERML 630


>gb|EEE63625.1| hypothetical protein OsJ_18442 [Oryza sativa Japonica Group]
          Length = 390

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 37/95 (38%), Positives = 53/95 (55%)
 Frame = -2

Query: 428 IVDGLCRSGKFLEAIDFFHMSLEHKFSSDLLLRLIYRLVKNRGLKELLKLFTGIEKRGLF 249
           ++D LCR  KFL A+  F+ SLE  F     L +I  L+    L +L  L   +  +G  
Sbjct: 293 VIDCLCREEKFLVALCCFYQSLEDDFFPSAFLSIIRGLIVGGMLGQLHTLIGCVLGQGFI 352

Query: 248 LDGLIFNSLIKAFCNQGVCQSIDMPSVCIILDKML 144
           ++  I+  LIKA C  G CQS++M  VC IL++ML
Sbjct: 353 IEVYIYQELIKALCKNGYCQSVEMYKVCHILERML 387


>gb|EAZ32399.1| hypothetical protein OsJ_16610 [Oryza sativa Japonica Group]
          Length = 422

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 36/96 (37%), Positives = 61/96 (63%)
 Frame = -2

Query: 431 TIVDGLCRSGKFLEAIDFFHMSLEHKFSSDLLLRLIYRLVKNRGLKELLKLFTGIEKRGL 252
           T+VD L RSG+  EA++     ++  +  + + RL Y LV++  ++E L+LF  + ++GL
Sbjct: 325 TLVDCLFRSGRRAEAVNLIR-HIDDGYPVEPVARLAYWLVRSGNVREALRLFDDMLEKGL 383

Query: 251 FLDGLIFNSLIKAFCNQGVCQSIDMPSVCIILDKML 144
            LD  IF ++IKAFC +G  +  +M  +C +LD+ML
Sbjct: 384 LLDSRIFANVIKAFCRKGPGECTEMLQLCSVLDRML 419


>emb|CAJ86105.1| H0103C06.9 [Oryza sativa Indica Group] gi|125550211|gb|EAY96033.1|
           hypothetical protein OsI_17906 [Oryza sativa Indica
           Group]
          Length = 515

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 36/96 (37%), Positives = 61/96 (63%)
 Frame = -2

Query: 431 TIVDGLCRSGKFLEAIDFFHMSLEHKFSSDLLLRLIYRLVKNRGLKELLKLFTGIEKRGL 252
           T+VD L RSG+  EA++     ++  +  + + RL Y LV++  ++E L+LF  + ++GL
Sbjct: 418 TLVDCLFRSGRRAEAVNLIR-HIDDGYPVEPVARLAYWLVRSGNVREALRLFDDMLEKGL 476

Query: 251 FLDGLIFNSLIKAFCNQGVCQSIDMPSVCIILDKML 144
            LD  IF ++IKAFC +G  +  +M  +C +LD+ML
Sbjct: 477 LLDSRIFANVIKAFCRKGPGECTEMLQLCSVLDRML 512


>ref|NP_001054249.1| Os04g0675600 [Oryza sativa Japonica Group]
           gi|38344930|emb|CAE54539.1| OSJNBa0018M05.21 [Oryza
           sativa Japonica Group] gi|113565820|dbj|BAF16163.1|
           Os04g0675600 [Oryza sativa Japonica Group]
          Length = 540

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 36/96 (37%), Positives = 61/96 (63%)
 Frame = -2

Query: 431 TIVDGLCRSGKFLEAIDFFHMSLEHKFSSDLLLRLIYRLVKNRGLKELLKLFTGIEKRGL 252
           T+VD L RSG+  EA++     ++  +  + + RL Y LV++  ++E L+LF  + ++GL
Sbjct: 443 TLVDCLFRSGRRAEAVNLIR-HIDDGYPVEPVARLAYWLVRSGNVREALRLFDDMLEKGL 501

Query: 251 FLDGLIFNSLIKAFCNQGVCQSIDMPSVCIILDKML 144
            LD  IF ++IKAFC +G  +  +M  +C +LD+ML
Sbjct: 502 LLDSRIFANVIKAFCRKGPGECTEMLQLCSVLDRML 537


>ref|XP_006655290.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Oryza brachyantha]
          Length = 426

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 36/95 (37%), Positives = 52/95 (54%)
 Frame = -2

Query: 428 IVDGLCRSGKFLEAIDFFHMSLEHKFSSDLLLRLIYRLVKNRGLKELLKLFTGIEKRGLF 249
           ++D LCR  KFL A+   + SLE  F     L ++  L+    L EL  L   +  +G  
Sbjct: 329 VIDCLCREKKFLVALCCIYQSLEVDFFQSAFLSIVRGLIVGGMLGELHTLIGCVLGQGFI 388

Query: 248 LDGLIFNSLIKAFCNQGVCQSIDMPSVCIILDKML 144
           ++  I+  LIK FC  G CQSI+M  VC IL+++L
Sbjct: 389 IEVYIYQELIKVFCKNGYCQSIEMYKVCYILERLL 423


>ref|XP_004987109.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Setaria italica]
          Length = 442

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 37/95 (38%), Positives = 53/95 (55%)
 Frame = -2

Query: 428 IVDGLCRSGKFLEAIDFFHMSLEHKFSSDLLLRLIYRLVKNRGLKELLKLFTGIEKRGLF 249
           ++D LC+  KFL AI+F           D  +R+   LVK +GL  +L L   I  +GL 
Sbjct: 339 VIDSLCKQEKFLTAINFLVEPSVKCLVPDHFVRMTNWLVKAKGLGYVLILLRKIRSKGLA 398

Query: 248 LDGLIFNSLIKAFCNQGVCQSIDMPSVCIILDKML 144
           LD  +FNSL++ FC +G C+  +   V +ILD ML
Sbjct: 399 LDVCVFNSLVRIFCWEGYCKHENFYEVSLILDSML 433


>gb|EMT22149.1| hypothetical protein F775_03881 [Aegilops tauschii]
          Length = 426

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 36/98 (36%), Positives = 54/98 (55%)
 Frame = -2

Query: 428 IVDGLCRSGKFLEAIDFFHMSLEHKFSSDLLLRLIYRLVKNRGLKELLKLFTGIEKRGLF 249
           ++D LCR  KFL A+  F+ SLE  FS  ++  ++  L+      EL  L   I  +G  
Sbjct: 329 VIDCLCREEKFLAALSCFYRSLEDGFSPSVVTSIVRGLIVGGKFGELHTLIGWILGQGFA 388

Query: 248 LDGLIFNSLIKAFCNQGVCQSIDMPSVCIILDKMLVRR 135
           +D  ++  +I AFC +G CQ  +M  VC IL++ML  R
Sbjct: 389 IDVYLYRVVIIAFCKKGYCQGTEMYKVCHILERMLSLR 426


>emb|CBG76275.1| OO_Ba0005L10-OO_Ba0081K17.26 [Oryza officinalis]
          Length = 537

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 35/96 (36%), Positives = 59/96 (61%)
 Frame = -2

Query: 431 TIVDGLCRSGKFLEAIDFFHMSLEHKFSSDLLLRLIYRLVKNRGLKELLKLFTGIEKRGL 252
           T+VD L RSG+  EA++     ++  +  + + RL Y LV++  ++E L LF  + ++GL
Sbjct: 440 TLVDCLFRSGRRAEAVNLIR-HVDDGYPVEPVARLAYWLVRSGNVREALWLFDDMLEKGL 498

Query: 251 FLDGLIFNSLIKAFCNQGVCQSIDMPSVCIILDKML 144
            LD   F ++IKAFC +G  +  +M  +C +LD+ML
Sbjct: 499 VLDSRSFANVIKAFCRKGPAECTEMFQLCSVLDRML 534


>ref|NP_001167998.1| hypothetical protein [Zea mays] gi|223945411|gb|ACN26789.1| unknown
           [Zea mays] gi|223946291|gb|ACN27229.1| unknown [Zea
           mays] gi|414584797|tpg|DAA35368.1| TPA: hypothetical
           protein ZEAMMB73_806553 [Zea mays]
          Length = 532

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 34/96 (35%), Positives = 60/96 (62%)
 Frame = -2

Query: 431 TIVDGLCRSGKFLEAIDFFHMSLEHKFSSDLLLRLIYRLVKNRGLKELLKLFTGIEKRGL 252
           T+VD L RSG+  +A +     ++  + ++ +  L Y LV++  ++E L+LF  I+ +GL
Sbjct: 435 TLVDCLFRSGRRSQAANLVR-HIDGGYPTEPVAHLTYWLVRSGNVREALRLFDDIQIKGL 493

Query: 251 FLDGLIFNSLIKAFCNQGVCQSIDMPSVCIILDKML 144
            LD  IF ++IKAFC +G  +  ++  +C +LD+ML
Sbjct: 494 VLDCRIFANVIKAFCRKGPTECSEISQLCFVLDRML 529


>ref|XP_004962174.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Setaria italica]
          Length = 548

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 35/95 (36%), Positives = 51/95 (53%)
 Frame = -2

Query: 428 IVDGLCRSGKFLEAIDFFHMSLEHKFSSDLLLRLIYRLVKNRGLKELLKLFTGIEKRGLF 249
           +VD LCR GKFL A+ + + SLE   S   +  ++  L+    L EL  L   I  +G  
Sbjct: 451 VVDCLCREGKFLVALSYLNRSLEDGLSRSAVSSIVRGLIAGGKLHELHTLIRWILGQGFI 510

Query: 248 LDGLIFNSLIKAFCNQGVCQSIDMPSVCIILDKML 144
           LD  ++  LI AFC +G C+  +M  V   L++ML
Sbjct: 511 LDVYMYQELIIAFCKKGYCRGTEMYKVSHTLERML 545


>gb|EMT18207.1| hypothetical protein F775_24182 [Aegilops tauschii]
          Length = 323

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 33/96 (34%), Positives = 59/96 (61%)
 Frame = -2

Query: 431 TIVDGLCRSGKFLEAIDFFHMSLEHKFSSDLLLRLIYRLVKNRGLKELLKLFTGIEKRGL 252
           T+VD L RSG+  EA +     ++  + ++ +  L + LV++  ++E L LF  +  +G+
Sbjct: 226 TLVDCLFRSGRRTEAANLVR-HIDGGYPAEPVAHLAFWLVRSGNVREALSLFDDMLVKGV 284

Query: 251 FLDGLIFNSLIKAFCNQGVCQSIDMPSVCIILDKML 144
            LD ++F ++IKAFC +G  +  DM  +C +LD+ML
Sbjct: 285 ALDAMVFANVIKAFCRKGPGECTDMTQLCSVLDRML 320


>tpg|DAA36597.1| TPA: hypothetical protein ZEAMMB73_327514 [Zea mays]
          Length = 549

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 32/95 (33%), Positives = 54/95 (56%)
 Frame = -2

Query: 428 IVDGLCRSGKFLEAIDFFHMSLEHKFSSDLLLRLIYRLVKNRGLKELLKLFTGIEKRGLF 249
           ++D LC+ GKFL A+   +  +E   S  ++  ++  L+    L+EL  L   I  +G  
Sbjct: 452 LIDCLCKEGKFLVALGCLNRCMEGGLSKAVVSSILRGLIAGGKLRELQALIGWILGQGFV 511

Query: 248 LDGLIFNSLIKAFCNQGVCQSIDMPSVCIILDKML 144
           LD  I+  LI +FC +G C+ ++M  VC IL++M+
Sbjct: 512 LDVYIYQELIISFCKKGYCRGLEMYIVCHILERMI 546