BLASTX nr result
ID: Zingiber25_contig00041196
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00041196
(462 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004973927.1| PREDICTED: nucleolysin TIAR-like [Setaria it... 135 7e-30
ref|XP_006659606.1| PREDICTED: nucleolysin TIAR-like [Oryza brac... 132 4e-29
ref|XP_002445861.1| hypothetical protein SORBIDRAFT_07g027050 [S... 130 2e-28
dbj|BAJ89501.1| predicted protein [Hordeum vulgare subsp. vulgare] 127 2e-27
ref|XP_002528005.1| nucleolysin tia-1, putative [Ricinus communi... 126 3e-27
ref|NP_001062266.1| Os08g0520300 [Oryza sativa Japonica Group] g... 126 3e-27
gb|EEC83898.1| hypothetical protein OsI_29913 [Oryza sativa Indi... 126 3e-27
gb|EMT10492.1| Nucleolysin TIAR [Aegilops tauschii] 125 8e-27
gb|AFW61500.1| hypothetical protein ZEAMMB73_921536 [Zea mays] 123 2e-26
ref|NP_001148740.1| LOC100282356 [Zea mays] gi|195621754|gb|ACG3... 123 2e-26
gb|ACF84709.1| unknown [Zea mays] 123 2e-26
ref|XP_003574781.1| PREDICTED: nucleolysin TIAR-like [Brachypodi... 121 1e-25
ref|XP_006382210.1| hypothetical protein POPTR_0006s29390g [Popu... 120 2e-25
ref|XP_002330832.1| predicted protein [Populus trichocarpa] gi|5... 120 2e-25
emb|CBI20808.3| unnamed protein product [Vitis vinifera] 119 4e-25
ref|XP_002283326.1| PREDICTED: nucleolysin TIAR [Vitis vinifera] 119 4e-25
ref|XP_002332123.1| predicted protein [Populus trichocarpa] gi|5... 118 9e-25
gb|ESW09126.1| hypothetical protein PHAVU_009G102400g [Phaseolus... 116 4e-24
gb|ACU24061.1| unknown [Glycine max] 115 5e-24
gb|ACU21389.1| unknown [Glycine max] 115 6e-24
>ref|XP_004973927.1| PREDICTED: nucleolysin TIAR-like [Setaria italica]
Length = 446
Score = 135 bits (339), Expect = 7e-30
Identities = 67/97 (69%), Positives = 77/97 (79%), Gaps = 2/97 (2%)
Frame = +1
Query: 1 CSWGTKPTPPGTASNPLPLPIPPFQ-LVPMPDL-QGFTATELLAYQRQLALSQAAAGTMV 174
CSWGTKPTPPGTAS PLP P+ P+Q V MP + QGFTA ELLAYQRQLALSQAAAG +
Sbjct: 350 CSWGTKPTPPGTASKPLPPPVAPYQPAVAMPGVPQGFTAAELLAYQRQLALSQAAAGQIA 409
Query: 175 GQHGLAAAQAPAGIGGSQVIYEGYPNLSSAQQLLYYD 285
GQHGLA + + GSQ +Y+GYPN SSAQQL+YY+
Sbjct: 410 GQHGLAGQVSAGLLAGSQALYDGYPNQSSAQQLMYYN 446
>ref|XP_006659606.1| PREDICTED: nucleolysin TIAR-like [Oryza brachyantha]
Length = 444
Score = 132 bits (333), Expect = 4e-29
Identities = 67/98 (68%), Positives = 78/98 (79%), Gaps = 3/98 (3%)
Frame = +1
Query: 1 CSWGTKPTPPGTASNPLPLPIPPFQLVPMPDL-QGFTATELLAYQRQLALSQAAAGTMVG 177
CSWG KPTPPGT+S PLP P+P +Q VPM + QGFTA EL+AYQRQLALSQAAAG + G
Sbjct: 348 CSWGNKPTPPGTSSKPLPPPLPSYQPVPMAGVPQGFTAAELVAYQRQLALSQAAAGQIAG 407
Query: 178 QHGLAAAQAPAGI--GGSQVIYEGYPNLSSAQQLLYYD 285
QHGL A Q AG+ GSQ +Y+GYPN SSAQQL+YY+
Sbjct: 408 QHGL-AGQVSAGLLAAGSQALYDGYPNQSSAQQLMYYN 444
>ref|XP_002445861.1| hypothetical protein SORBIDRAFT_07g027050 [Sorghum bicolor]
gi|241942211|gb|EES15356.1| hypothetical protein
SORBIDRAFT_07g027050 [Sorghum bicolor]
Length = 447
Score = 130 bits (326), Expect = 2e-28
Identities = 68/100 (68%), Positives = 78/100 (78%), Gaps = 5/100 (5%)
Frame = +1
Query: 1 CSWGTKPTPPGTASNPLPLPIPPFQ-LVPMPDL-QGFTATELLAYQRQLALSQAAAGTMV 174
CSWG KPTPPGT+S PLP P+ P+Q V MP + QGFTA ELLAYQRQLALSQAAAG +
Sbjct: 349 CSWGNKPTPPGTSSKPLPPPVAPYQPAVAMPGVPQGFTAAELLAYQRQLALSQAAAGQIA 408
Query: 175 GQHGLAAAQAPAGI---GGSQVIYEGYPNLSSAQQLLYYD 285
GQHGL A Q AG+ GSQ +Y+GYPN SSAQQL+YY+
Sbjct: 409 GQHGL-AGQVSAGLLAAAGSQALYDGYPNQSSAQQLMYYN 447
>dbj|BAJ89501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 447
Score = 127 bits (319), Expect = 2e-27
Identities = 66/98 (67%), Positives = 76/98 (77%), Gaps = 3/98 (3%)
Frame = +1
Query: 1 CSWGTKPTPPGTASNPLPLPIPPFQLVPMPDL-QGFTATELLAYQRQLALSQAAAGTMVG 177
CSWG KPTPPGT+S PLP PI +Q V M + QGFTA ELLAYQRQLALSQAAAG + G
Sbjct: 351 CSWGNKPTPPGTSSKPLPPPIASYQPVAMAGVPQGFTAAELLAYQRQLALSQAAAGQIAG 410
Query: 178 QHGLAAAQAPAGI--GGSQVIYEGYPNLSSAQQLLYYD 285
QHGL A Q AG+ GSQ +Y+GYPN +SAQQL+YY+
Sbjct: 411 QHGL-AGQVSAGLLAAGSQALYDGYPNQTSAQQLMYYN 447
>ref|XP_002528005.1| nucleolysin tia-1, putative [Ricinus communis]
gi|223532631|gb|EEF34417.1| nucleolysin tia-1, putative
[Ricinus communis]
Length = 417
Score = 126 bits (317), Expect = 3e-27
Identities = 63/103 (61%), Positives = 75/103 (72%), Gaps = 9/103 (8%)
Frame = +1
Query: 1 CSWGTKPTPPGTASNPLPLPIPPFQLVPMPDL-QGFTATELLAYQRQLALSQAAAG---- 165
CSWG+KPTPPGTASNPLP PI P+Q++P + G++AT+LL YQRQLALSQAAA
Sbjct: 314 CSWGSKPTPPGTASNPLPPPIQPYQVLPSSGMNHGYSATDLLVYQRQLALSQAAASGLSG 373
Query: 166 ----TMVGQHGLAAAQAPAGIGGSQVIYEGYPNLSSAQQLLYY 282
+ GQHGLAAA GGSQ +Y+GYPN SS QQL+YY
Sbjct: 374 QALVQLTGQHGLAAASMGLNSGGSQALYDGYPNNSSGQQLMYY 416
>ref|NP_001062266.1| Os08g0520300 [Oryza sativa Japonica Group]
gi|42408523|dbj|BAD09702.1| putative oligouridylate
binding protein [Oryza sativa Japonica Group]
gi|42409171|dbj|BAD10437.1| putative oligouridylate
binding protein [Oryza sativa Japonica Group]
gi|113624235|dbj|BAF24180.1| Os08g0520300 [Oryza sativa
Japonica Group] gi|215697677|dbj|BAG91671.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222640879|gb|EEE69011.1| hypothetical protein
OsJ_27962 [Oryza sativa Japonica Group]
Length = 447
Score = 126 bits (316), Expect = 3e-27
Identities = 62/98 (63%), Positives = 76/98 (77%), Gaps = 3/98 (3%)
Frame = +1
Query: 1 CSWGTKPTPPGTASNPLPLPIPPFQLVPMPDL-QGFTATELLAYQRQLALSQAAAGTMVG 177
CSWG KPTPPGT+S PLP P+P +Q VPM + QGF+A +++AYQRQL LSQ AAG + G
Sbjct: 351 CSWGNKPTPPGTSSKPLPPPLPSYQPVPMAGVPQGFSAADIVAYQRQLTLSQVAAGQIAG 410
Query: 178 QHGLAAAQAPAGI--GGSQVIYEGYPNLSSAQQLLYYD 285
QHGL A Q AG+ GSQ +Y+GYPN SSAQQL+YY+
Sbjct: 411 QHGL-AGQVSAGLLAAGSQALYDGYPNQSSAQQLMYYN 447
>gb|EEC83898.1| hypothetical protein OsI_29913 [Oryza sativa Indica Group]
Length = 407
Score = 126 bits (316), Expect = 3e-27
Identities = 62/98 (63%), Positives = 76/98 (77%), Gaps = 3/98 (3%)
Frame = +1
Query: 1 CSWGTKPTPPGTASNPLPLPIPPFQLVPMPDL-QGFTATELLAYQRQLALSQAAAGTMVG 177
CSWG KPTPPGT+S PLP P+P +Q VPM + QGF+A +++AYQRQL LSQ AAG + G
Sbjct: 311 CSWGNKPTPPGTSSKPLPPPLPSYQPVPMAGVPQGFSAADIVAYQRQLTLSQVAAGQIAG 370
Query: 178 QHGLAAAQAPAGI--GGSQVIYEGYPNLSSAQQLLYYD 285
QHGL A Q AG+ GSQ +Y+GYPN SSAQQL+YY+
Sbjct: 371 QHGL-AGQVSAGLLAAGSQALYDGYPNQSSAQQLMYYN 407
>gb|EMT10492.1| Nucleolysin TIAR [Aegilops tauschii]
Length = 398
Score = 125 bits (313), Expect = 8e-27
Identities = 64/98 (65%), Positives = 76/98 (77%), Gaps = 3/98 (3%)
Frame = +1
Query: 1 CSWGTKPTPPGTASNPLPLPIPPFQLVPMPDL-QGFTATELLAYQRQLALSQAAAGTMVG 177
CSWG KPTPPGT+S PLP PI +Q + M + QGFTA ELLAYQRQLALSQAAAG + G
Sbjct: 302 CSWGNKPTPPGTSSKPLPPPIASYQPIAMAGVPQGFTAAELLAYQRQLALSQAAAGQIAG 361
Query: 178 QHGLAAAQAPAGI--GGSQVIYEGYPNLSSAQQLLYYD 285
QHGL A Q AG+ GSQ +Y+GYP+ +SAQQL+YY+
Sbjct: 362 QHGL-AGQVSAGLLAAGSQALYDGYPSQTSAQQLMYYN 398
>gb|AFW61500.1| hypothetical protein ZEAMMB73_921536 [Zea mays]
Length = 409
Score = 123 bits (309), Expect = 2e-26
Identities = 66/100 (66%), Positives = 75/100 (75%), Gaps = 5/100 (5%)
Frame = +1
Query: 1 CSWGTKPTPPGTASNPLPLPIPPFQ-LVPMPDL-QGFTATELLAYQRQLALSQAAAGTMV 174
CSWG KPTPPGT S PLP P+ +Q V M + QGFTA ELLAYQRQLALSQAAAG +
Sbjct: 311 CSWGNKPTPPGTTSKPLPPPVASYQPAVAMSGVPQGFTAAELLAYQRQLALSQAAAGQIA 370
Query: 175 GQHGLAAAQAPAGI---GGSQVIYEGYPNLSSAQQLLYYD 285
GQHGL A Q AG+ GSQ +Y+GYPN SSAQQL+YY+
Sbjct: 371 GQHGL-AGQVSAGLLAAAGSQALYDGYPNQSSAQQLMYYN 409
>ref|NP_001148740.1| LOC100282356 [Zea mays] gi|195621754|gb|ACG32707.1| mRNA 3-UTR
binding protein [Zea mays] gi|224030425|gb|ACN34288.1|
unknown [Zea mays] gi|413921566|gb|AFW61498.1| mRNA
3-UTR binding protein [Zea mays]
Length = 449
Score = 123 bits (309), Expect = 2e-26
Identities = 66/100 (66%), Positives = 75/100 (75%), Gaps = 5/100 (5%)
Frame = +1
Query: 1 CSWGTKPTPPGTASNPLPLPIPPFQ-LVPMPDL-QGFTATELLAYQRQLALSQAAAGTMV 174
CSWG KPTPPGT S PLP P+ +Q V M + QGFTA ELLAYQRQLALSQAAAG +
Sbjct: 351 CSWGNKPTPPGTTSKPLPPPVASYQPAVAMSGVPQGFTAAELLAYQRQLALSQAAAGQIA 410
Query: 175 GQHGLAAAQAPAGI---GGSQVIYEGYPNLSSAQQLLYYD 285
GQHGL A Q AG+ GSQ +Y+GYPN SSAQQL+YY+
Sbjct: 411 GQHGL-AGQVSAGLLAAAGSQALYDGYPNQSSAQQLMYYN 449
>gb|ACF84709.1| unknown [Zea mays]
Length = 424
Score = 123 bits (309), Expect = 2e-26
Identities = 66/100 (66%), Positives = 75/100 (75%), Gaps = 5/100 (5%)
Frame = +1
Query: 1 CSWGTKPTPPGTASNPLPLPIPPFQ-LVPMPDL-QGFTATELLAYQRQLALSQAAAGTMV 174
CSWG KPTPPGT S PLP P+ +Q V M + QGFTA ELLAYQRQLALSQAAAG +
Sbjct: 326 CSWGNKPTPPGTTSKPLPPPVASYQPAVAMSGVPQGFTAAELLAYQRQLALSQAAAGQIA 385
Query: 175 GQHGLAAAQAPAGI---GGSQVIYEGYPNLSSAQQLLYYD 285
GQHGL A Q AG+ GSQ +Y+GYPN SSAQQL+YY+
Sbjct: 386 GQHGL-AGQVSAGLLAAAGSQALYDGYPNQSSAQQLMYYN 424
>ref|XP_003574781.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 452
Score = 121 bits (303), Expect = 1e-25
Identities = 66/99 (66%), Positives = 75/99 (75%), Gaps = 4/99 (4%)
Frame = +1
Query: 1 CSWGTKPTPPGTASNPLPLPIPPFQLVPMPDL-QGFTATELLAYQRQLALSQAAAGTM-V 174
CSWG KPTPPGT+S PLP P P +Q V M + QGFTA ELLAYQRQLALSQAAAG +
Sbjct: 355 CSWGNKPTPPGTSSKPLPPPGPAYQPVAMAGVPQGFTAAELLAYQRQLALSQAAAGQIAA 414
Query: 175 GQHGLAAAQAPAGI--GGSQVIYEGYPNLSSAQQLLYYD 285
G HGL A Q AG+ GSQ +Y+GYPN SSAQQL+YY+
Sbjct: 415 GGHGL-AGQVSAGLLAAGSQALYDGYPNQSSAQQLMYYN 452
>ref|XP_006382210.1| hypothetical protein POPTR_0006s29390g [Populus trichocarpa]
gi|550337365|gb|ERP60007.1| hypothetical protein
POPTR_0006s29390g [Populus trichocarpa]
Length = 414
Score = 120 bits (300), Expect = 2e-25
Identities = 61/104 (58%), Positives = 75/104 (72%), Gaps = 10/104 (9%)
Frame = +1
Query: 1 CSWGTKPTPPGTASNPLPLPIPPFQLVPMPDL-QGFTATELLAYQRQLALSQAAAG---- 165
CSWG+KPTPPGTASNPLP P P+Q+ P + QG++A +LLAYQRQLALSQAAA
Sbjct: 310 CSWGSKPTPPGTASNPLPPPAQPYQIAPSTGINQGYSAADLLAYQRQLALSQAAASGLSG 369
Query: 166 ----TMVGQHGLAAAQAPAGIGGSQVIYEGYPN-LSSAQQLLYY 282
+ GQHGL+AA GSQ +Y+GYPN L++AQQL+YY
Sbjct: 370 QALVQLTGQHGLSAASMGLSSSGSQALYDGYPNSLAAAQQLMYY 413
>ref|XP_002330832.1| predicted protein [Populus trichocarpa]
gi|566178798|ref|XP_006382209.1| hypothetical protein
POPTR_0006s29390g [Populus trichocarpa]
gi|550337364|gb|ERP60006.1| hypothetical protein
POPTR_0006s29390g [Populus trichocarpa]
Length = 415
Score = 120 bits (300), Expect = 2e-25
Identities = 61/104 (58%), Positives = 75/104 (72%), Gaps = 10/104 (9%)
Frame = +1
Query: 1 CSWGTKPTPPGTASNPLPLPIPPFQLVPMPDL-QGFTATELLAYQRQLALSQAAAG---- 165
CSWG+KPTPPGTASNPLP P P+Q+ P + QG++A +LLAYQRQLALSQAAA
Sbjct: 311 CSWGSKPTPPGTASNPLPPPAQPYQIAPSTGINQGYSAADLLAYQRQLALSQAAASGLSG 370
Query: 166 ----TMVGQHGLAAAQAPAGIGGSQVIYEGYPN-LSSAQQLLYY 282
+ GQHGL+AA GSQ +Y+GYPN L++AQQL+YY
Sbjct: 371 QALVQLTGQHGLSAASMGLSSSGSQALYDGYPNSLAAAQQLMYY 414
>emb|CBI20808.3| unnamed protein product [Vitis vinifera]
Length = 397
Score = 119 bits (298), Expect = 4e-25
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 9/103 (8%)
Frame = +1
Query: 1 CSWGTKPTPPGTASNPLPLPIPPFQLVPMPDL-QGFTATELLAYQRQLALSQAAAGTMVG 177
CSWG+KPTP GTASNPLP P P+Q++P + QG++ ELLAYQRQLALSQAAA ++ G
Sbjct: 294 CSWGSKPTPLGTASNPLPPPAQPYQILPTAGINQGYSPAELLAYQRQLALSQAAASSLSG 353
Query: 178 Q--------HGLAAAQAPAGIGGSQVIYEGYPNLSSAQQLLYY 282
Q HGLAA GG+Q +Y+GYPN SS QQL+YY
Sbjct: 354 QALMQMTGHHGLAAGSMGVSSGGTQAMYDGYPNNSSGQQLMYY 396
>ref|XP_002283326.1| PREDICTED: nucleolysin TIAR [Vitis vinifera]
Length = 436
Score = 119 bits (298), Expect = 4e-25
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 9/103 (8%)
Frame = +1
Query: 1 CSWGTKPTPPGTASNPLPLPIPPFQLVPMPDL-QGFTATELLAYQRQLALSQAAAGTMVG 177
CSWG+KPTP GTASNPLP P P+Q++P + QG++ ELLAYQRQLALSQAAA ++ G
Sbjct: 333 CSWGSKPTPLGTASNPLPPPAQPYQILPTAGINQGYSPAELLAYQRQLALSQAAASSLSG 392
Query: 178 Q--------HGLAAAQAPAGIGGSQVIYEGYPNLSSAQQLLYY 282
Q HGLAA GG+Q +Y+GYPN SS QQL+YY
Sbjct: 393 QALMQMTGHHGLAAGSMGVSSGGTQAMYDGYPNNSSGQQLMYY 435
>ref|XP_002332123.1| predicted protein [Populus trichocarpa]
gi|566214148|ref|XP_006371833.1| hypothetical protein
POPTR_0018s04060g [Populus trichocarpa]
gi|550318006|gb|ERP49630.1| hypothetical protein
POPTR_0018s04060g [Populus trichocarpa]
Length = 425
Score = 118 bits (295), Expect = 9e-25
Identities = 62/105 (59%), Positives = 74/105 (70%), Gaps = 11/105 (10%)
Frame = +1
Query: 1 CSWGTKPTPPGTASNPLPLPIP--PFQLVPMPDL-QGFTATELLAYQRQLALSQAAAG-- 165
CSWG+KPTPPGTASNPLP P P P+Q+ P + QG++A +LLAYQRQLALSQAAA
Sbjct: 320 CSWGSKPTPPGTASNPLPPPPPAQPYQIAPSTGINQGYSAADLLAYQRQLALSQAAASGL 379
Query: 166 ------TMVGQHGLAAAQAPAGIGGSQVIYEGYPNLSSAQQLLYY 282
+ GQHGLAAA GGSQ +Y+GY N +AQQL+YY
Sbjct: 380 SGQALLQLAGQHGLAAASMDLSAGGSQAMYDGYHNGLAAQQLMYY 424
>gb|ESW09126.1| hypothetical protein PHAVU_009G102400g [Phaseolus vulgaris]
Length = 434
Score = 116 bits (290), Expect = 4e-24
Identities = 59/103 (57%), Positives = 69/103 (66%), Gaps = 9/103 (8%)
Frame = +1
Query: 1 CSWGTKPTPPGTASNPLPLPIPPFQLVPMPDL-QGFTATELLAYQRQLALSQAAAG---- 165
CSWG+KPTPPGTASNPLP P P+Q++P + QG++ ELLAYQRQL LSQAA
Sbjct: 331 CSWGSKPTPPGTASNPLPPPAQPYQILPTAGMNQGYSPAELLAYQRQLTLSQAAVSGLSG 390
Query: 166 ----TMVGQHGLAAAQAPAGIGGSQVIYEGYPNLSSAQQLLYY 282
M GQHGLA A GGSQ +Y+GY SS QQL+YY
Sbjct: 391 QALLQMTGQHGLAPASMGVNSGGSQAMYDGYTGNSSRQQLMYY 433
>gb|ACU24061.1| unknown [Glycine max]
Length = 435
Score = 115 bits (289), Expect = 5e-24
Identities = 59/103 (57%), Positives = 69/103 (66%), Gaps = 9/103 (8%)
Frame = +1
Query: 1 CSWGTKPTPPGTASNPLPLPIPPFQLVPMPDL-QGFTATELLAYQRQLALSQAAAG---- 165
CSWG+KPTPPGTASNPLP P P+Q++P + QG++ ELLAYQRQLALSQAA
Sbjct: 332 CSWGSKPTPPGTASNPLPPPAQPYQILPTAGMNQGYSPAELLAYQRQLALSQAAVSGLSG 391
Query: 166 ----TMVGQHGLAAAQAPAGIGGSQVIYEGYPNLSSAQQLLYY 282
M GQHGLA A G SQ +Y+GY SS QQL+YY
Sbjct: 392 QAFLQMTGQHGLAPASMGINFGASQAMYDGYTGNSSRQQLMYY 434
>gb|ACU21389.1| unknown [Glycine max]
Length = 452
Score = 115 bits (288), Expect = 6e-24
Identities = 59/103 (57%), Positives = 69/103 (66%), Gaps = 9/103 (8%)
Frame = +1
Query: 1 CSWGTKPTPPGTASNPLPLPIPPFQLVPMPDL-QGFTATELLAYQRQLALSQAAAG---- 165
CSWG+KPTPPGTASNPLP P P+Q++P + QG++ ELLAYQRQLALSQAA
Sbjct: 331 CSWGSKPTPPGTASNPLPPPAQPYQILPTAGMNQGYSPAELLAYQRQLALSQAAVSGLSG 390
Query: 166 ----TMVGQHGLAAAQAPAGIGGSQVIYEGYPNLSSAQQLLYY 282
M GQHGLA A G SQ +Y+GY SS QQL+YY
Sbjct: 391 QTLLQMTGQHGLAPASMGVNSGASQAMYDGYTGNSSRQQLMYY 433