BLASTX nr result
ID: Zingiber25_contig00041194
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00041194
(668 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008854616.1| ribosomal protein S18 [Curcuma roscoeana] gi... 140 3e-31
ref|YP_007475726.1| ribosomal protein S18 [Zingiber spectabile] ... 139 8e-31
gb|AGE93392.1| ribosomal protein S18 [Alpinia zerumbet] 137 2e-30
gb|AEZ48826.1| ribosomal protein S18, partial [Renealmia alpinia] 137 2e-30
gb|AEZ48813.1| ribosomal protein S18 [Joinvillea ascendens] 121 3e-27
gb|AGW04611.1| ribosomal protein S18 [Marsdenia astephanoides] 127 4e-27
gb|AEX37327.1| ribosomal protein S18 (chloroplast) [Arbutus unedo] 126 5e-27
ref|YP_008854532.1| ribosomal protein S18 [Ravenala madagascarie... 126 7e-27
gb|ADH94365.1| ribosomal protein S18 [Syzygium cumini] 126 7e-27
ref|YP_009002277.1| ribosomal protein S18 (chloroplast) [Pinguic... 125 9e-27
ref|YP_008578109.1| ribosomal protein S18 (chloroplast) [Allosyn... 125 9e-27
gb|ACF33379.1| ribosomal protein S18 [Gonystylus bancanus] 125 9e-27
gb|AGW04842.1| ribosomal protein S18 [Sisyranthus trichostomus] 125 1e-26
gb|ADD30011.1| ribosomal protein S18 [Rhododendron simsii] 125 1e-26
ref|YP_001936539.1| ribosomal protein S18 [Fagopyrum esculentum ... 125 1e-26
ref|YP_008994311.1| ribosomal protein S18 [Melianthus villosus] ... 125 2e-26
gb|AGW04919.1| ribosomal protein S18 [Telosma cordata] 125 2e-26
ref|YP_008578194.1| ribosomal protein S18 (chloroplast) [Stockwe... 125 2e-26
ref|YP_008577089.1| ribosomal protein S18 (chloroplast) [Eucalyp... 125 2e-26
ref|YP_008575984.1| ribosomal protein S18 (chloroplast) [Eucalyp... 125 2e-26
>ref|YP_008854616.1| ribosomal protein S18 [Curcuma roscoeana]
gi|557637523|gb|AHA13118.1| ribosomal protein S18
[Curcuma roscoeana]
Length = 111
Score = 140 bits (354), Expect = 3e-31
Identities = 73/73 (100%), Positives = 73/73 (100%)
Frame = -3
Query: 444 LPPIRSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 265
LPPIRSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL
Sbjct: 26 LPPIRSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 85
Query: 264 NNERLFKNKKSES 226
NNERLFKNKKSES
Sbjct: 86 NNERLFKNKKSES 98
>ref|YP_007475726.1| ribosomal protein S18 [Zingiber spectabile]
gi|449326206|gb|AGE92791.1| ribosomal protein S18
[Zingiber spectabile]
Length = 104
Score = 139 bits (350), Expect = 8e-31
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = -3
Query: 444 LPPIRSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 265
LPPIRSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL
Sbjct: 19 LPPIRSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 78
Query: 264 NNERLFKNKKSE 229
NNERLFKNKKSE
Sbjct: 79 NNERLFKNKKSE 90
>gb|AGE93392.1| ribosomal protein S18 [Alpinia zerumbet]
Length = 117
Score = 137 bits (346), Expect = 2e-30
Identities = 72/73 (98%), Positives = 72/73 (98%)
Frame = -3
Query: 444 LPPIRSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 265
LP IRSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL
Sbjct: 26 LPQIRSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 85
Query: 264 NNERLFKNKKSES 226
NNERLFKNKKSES
Sbjct: 86 NNERLFKNKKSES 98
>gb|AEZ48826.1| ribosomal protein S18, partial [Renealmia alpinia]
Length = 103
Score = 137 bits (346), Expect = 2e-30
Identities = 72/73 (98%), Positives = 72/73 (98%)
Frame = -3
Query: 444 LPPIRSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 265
LP IRSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL
Sbjct: 19 LPQIRSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 78
Query: 264 NNERLFKNKKSES 226
NNERLFKNKKSES
Sbjct: 79 NNERLFKNKKSES 91
>gb|AEZ48813.1| ribosomal protein S18 [Joinvillea ascendens]
Length = 121
Score = 121 bits (303), Expect(2) = 3e-27
Identities = 62/72 (86%), Positives = 68/72 (94%)
Frame = -3
Query: 441 PPIRSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLN 262
PPI GDRIDYRNMSLI+RFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLN
Sbjct: 19 PPIGLGDRIDYRNMSLINRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLN 78
Query: 261 NERLFKNKKSES 226
NE+ F+ K+++S
Sbjct: 79 NEKQFQFKRAQS 90
Score = 27.3 bits (59), Expect(2) = 3e-27
Identities = 14/22 (63%), Positives = 16/22 (72%), Gaps = 2/22 (9%)
Frame = -1
Query: 194 KKNRHTPQLTP--NSNCNSSSD 135
++NRH PQLT NSN N SSD
Sbjct: 100 RQNRHIPQLTQNFNSNRNLSSD 121
>gb|AGW04611.1| ribosomal protein S18 [Marsdenia astephanoides]
Length = 107
Score = 127 bits (318), Expect = 4e-27
Identities = 65/71 (91%), Positives = 69/71 (97%)
Frame = -3
Query: 444 LPPIRSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 265
LPPI+SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL
Sbjct: 19 LPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 78
Query: 264 NNERLFKNKKS 232
NNE+ F+ K+S
Sbjct: 79 NNEKQFERKES 89
>gb|AEX37327.1| ribosomal protein S18 (chloroplast) [Arbutus unedo]
Length = 105
Score = 126 bits (317), Expect = 5e-27
Identities = 64/73 (87%), Positives = 71/73 (97%)
Frame = -3
Query: 444 LPPIRSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 265
LPPI+SGDRIDYRN+SLISRFIS+QGKILSRRVNRLTLKQQRLITIAIKQARILSLLPF
Sbjct: 19 LPPIQSGDRIDYRNISLISRFISQQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFR 78
Query: 264 NNERLFKNKKSES 226
NNE+LFK K+++S
Sbjct: 79 NNEKLFKMKRTQS 91
>ref|YP_008854532.1| ribosomal protein S18 [Ravenala madagascariensis]
gi|557637020|gb|AHA12621.1| ribosomal protein S18
[Ravenala madagascariensis]
Length = 134
Score = 126 bits (316), Expect = 7e-27
Identities = 65/72 (90%), Positives = 68/72 (94%)
Frame = -3
Query: 441 PPIRSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLN 262
PPI SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLN
Sbjct: 46 PPIGSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLN 105
Query: 261 NERLFKNKKSES 226
NE+LFK K+ +
Sbjct: 106 NEKLFKFKRKRA 117
>gb|ADH94365.1| ribosomal protein S18 [Syzygium cumini]
Length = 101
Score = 126 bits (316), Expect = 7e-27
Identities = 65/73 (89%), Positives = 69/73 (94%)
Frame = -3
Query: 444 LPPIRSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 265
LPPI+SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL
Sbjct: 19 LPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 78
Query: 264 NNERLFKNKKSES 226
NNE+ F+ +S S
Sbjct: 79 NNEKQFERSESTS 91
>ref|YP_009002277.1| ribosomal protein S18 (chloroplast) [Pinguicula ehlersiae]
gi|575882159|emb|CDL78833.1| ribosomal protein S18
(chloroplast) [Pinguicula ehlersiae]
Length = 134
Score = 125 bits (315), Expect = 9e-27
Identities = 70/106 (66%), Positives = 77/106 (72%)
Frame = -3
Query: 444 LPPIRSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 265
LPPI SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL
Sbjct: 19 LPPIESGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 78
Query: 264 NNERLFKNKKSESXXXXXXXXXXXXXXTYSSIDSKLQL*LKLRCVF 127
NNE+ F+ + + S++S+ Q LK VF
Sbjct: 79 NNEKQFEKTEPTARTTGLITGNKINRLIICSLESEFQSELKRGLVF 124
>ref|YP_008578109.1| ribosomal protein S18 (chloroplast) [Allosyncarpia ternata]
gi|442569356|gb|AGC59518.1| ribosomal protein S18
(chloroplast) [Allosyncarpia ternata]
Length = 101
Score = 125 bits (315), Expect = 9e-27
Identities = 64/71 (90%), Positives = 69/71 (97%)
Frame = -3
Query: 444 LPPIRSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 265
LPPI+SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL
Sbjct: 19 LPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 78
Query: 264 NNERLFKNKKS 232
NNE+ F+ ++S
Sbjct: 79 NNEKQFERRES 89
>gb|ACF33379.1| ribosomal protein S18 [Gonystylus bancanus]
Length = 101
Score = 125 bits (315), Expect = 9e-27
Identities = 64/71 (90%), Positives = 69/71 (97%)
Frame = -3
Query: 444 LPPIRSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 265
LPPI+SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL
Sbjct: 19 LPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 78
Query: 264 NNERLFKNKKS 232
NNE+ F+ ++S
Sbjct: 79 NNEKRFERRES 89
>gb|AGW04842.1| ribosomal protein S18 [Sisyranthus trichostomus]
Length = 107
Score = 125 bits (314), Expect = 1e-26
Identities = 64/71 (90%), Positives = 69/71 (97%)
Frame = -3
Query: 444 LPPIRSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 265
LPPI+SG+RIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL
Sbjct: 19 LPPIQSGERIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 78
Query: 264 NNERLFKNKKS 232
NNE+ F+ K+S
Sbjct: 79 NNEKQFERKES 89
>gb|ADD30011.1| ribosomal protein S18 [Rhododendron simsii]
Length = 112
Score = 125 bits (314), Expect = 1e-26
Identities = 64/70 (91%), Positives = 68/70 (97%)
Frame = -3
Query: 444 LPPIRSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 265
LPPI+SGDRIDYRNM+LISRFIS+QGKILSRRVNRLTLKQQRLITIAIKQARILS LPFL
Sbjct: 19 LPPIQSGDRIDYRNMTLISRFISQQGKILSRRVNRLTLKQQRLITIAIKQARILSSLPFL 78
Query: 264 NNERLFKNKK 235
NNE+LFK KK
Sbjct: 79 NNEKLFKMKK 88
>ref|YP_001936539.1| ribosomal protein S18 [Fagopyrum esculentum subsp. ancestrale]
gi|166065379|gb|ABY79754.1| ribosomal protein S18
[Fagopyrum esculentum subsp. ancestrale]
Length = 101
Score = 125 bits (314), Expect = 1e-26
Identities = 64/71 (90%), Positives = 68/71 (95%)
Frame = -3
Query: 444 LPPIRSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 265
LPP++SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL
Sbjct: 19 LPPLQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 78
Query: 264 NNERLFKNKKS 232
NNE+ F+ KS
Sbjct: 79 NNEKQFERAKS 89
>ref|YP_008994311.1| ribosomal protein S18 [Melianthus villosus]
gi|527355161|gb|AGS13030.1| ribosomal protein S18
[Melianthus villosus]
Length = 101
Score = 125 bits (313), Expect = 2e-26
Identities = 64/71 (90%), Positives = 68/71 (95%)
Frame = -3
Query: 444 LPPIRSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 265
LPPI+SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL
Sbjct: 19 LPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 78
Query: 264 NNERLFKNKKS 232
NNE+ F+ +S
Sbjct: 79 NNEKQFERSES 89
>gb|AGW04919.1| ribosomal protein S18 [Telosma cordata]
Length = 111
Score = 125 bits (313), Expect = 2e-26
Identities = 64/71 (90%), Positives = 68/71 (95%)
Frame = -3
Query: 444 LPPIRSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 265
LPPI+SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL
Sbjct: 19 LPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 78
Query: 264 NNERLFKNKKS 232
NNE+ F+ +S
Sbjct: 79 NNEKQFERNES 89
>ref|YP_008578194.1| ribosomal protein S18 (chloroplast) [Stockwellia quadrifida]
gi|442569442|gb|AGC59603.1| ribosomal protein S18
(chloroplast) [Stockwellia quadrifida]
Length = 101
Score = 125 bits (313), Expect = 2e-26
Identities = 64/71 (90%), Positives = 68/71 (95%)
Frame = -3
Query: 444 LPPIRSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 265
LPPI+SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL
Sbjct: 19 LPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 78
Query: 264 NNERLFKNKKS 232
NNE+ F+ +S
Sbjct: 79 NNEKQFERSES 89
>ref|YP_008577089.1| ribosomal protein S18 (chloroplast) [Eucalyptus torquata]
gi|442568324|gb|AGC58498.1| ribosomal protein S18
(chloroplast) [Eucalyptus torquata]
Length = 101
Score = 125 bits (313), Expect = 2e-26
Identities = 64/71 (90%), Positives = 68/71 (95%)
Frame = -3
Query: 444 LPPIRSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 265
LPPI+SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL
Sbjct: 19 LPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 78
Query: 264 NNERLFKNKKS 232
NNE+ F+ +S
Sbjct: 79 NNEKQFERSES 89
>ref|YP_008575984.1| ribosomal protein S18 (chloroplast) [Eucalyptus cloeziana]
gi|442567034|gb|AGC57223.1| ribosomal protein S18
(chloroplast) [Eucalyptus cloeziana]
Length = 101
Score = 125 bits (313), Expect = 2e-26
Identities = 64/71 (90%), Positives = 68/71 (95%)
Frame = -3
Query: 444 LPPIRSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 265
LPPI+SGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL
Sbjct: 19 LPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFL 78
Query: 264 NNERLFKNKKS 232
NNE+ F+ +S
Sbjct: 79 NNEKQFERSES 89