BLASTX nr result
ID: Zingiber25_contig00041156
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00041156
(602 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB45089.1| Flap endonuclease GEN-like 1 [Morus notabilis] 41 6e-09
gb|EXC33535.1| Flap endonuclease GEN-like 1 [Morus notabilis] 41 1e-08
gb|EMJ20325.1| hypothetical protein PRUPE_ppa015861mg [Prunus pe... 39 2e-08
ref|XP_002320770.2| hypothetical protein POPTR_0014s07330g [Popu... 39 3e-08
gb|EXB38154.1| Flap endonuclease GEN-like 1 [Morus notabilis] 41 3e-08
gb|EOX96099.1| 5'-3' exonuclease family protein, putative isofor... 40 4e-08
ref|XP_006445167.1| hypothetical protein CICLE_v10019320mg [Citr... 39 6e-08
ref|XP_006445168.1| hypothetical protein CICLE_v10019320mg [Citr... 39 6e-08
ref|XP_006602772.1| PREDICTED: flap endonuclease GEN-like 1-like... 38 6e-08
ref|XP_004306852.1| PREDICTED: flap endonuclease GEN-like 1-like... 39 2e-07
ref|XP_006339484.1| PREDICTED: flap endonuclease GEN-like 1-like... 37 2e-07
ref|XP_004229854.1| PREDICTED: flap endonuclease GEN-like 1-like... 37 2e-07
ref|XP_004492689.1| PREDICTED: flap endonuclease GEN-like 1-like... 40 4e-07
ref|XP_003623847.1| Flap endonuclease GEN-like protein [Medicago... 38 6e-07
ref|XP_004144985.1| PREDICTED: flap endonuclease GEN-like 1-like... 37 6e-07
ref|XP_004957397.1| PREDICTED: flap endonuclease GEN-like 1-like... 35 3e-06
ref|XP_002460545.1| hypothetical protein SORBIDRAFT_02g030290 [S... 35 3e-06
sp|Q64MA3.1|GENL1_ORYSJ RecName: Full=Flap endonuclease GEN-like... 35 4e-06
ref|XP_003578463.1| PREDICTED: flap endonuclease GEN-like 1-like... 35 5e-06
gb|EAZ09797.1| hypothetical protein OsI_32084 [Oryza sativa Indi... 35 5e-06
>gb|EXB45089.1| Flap endonuclease GEN-like 1 [Morus notabilis]
Length = 606
Score = 41.2 bits (95), Expect(3) = 6e-09
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3
Query: 429 GRFWDLLKPYARNEGVDF 376
G+FWDLLKPYARNEG DF
Sbjct: 5 GKFWDLLKPYARNEGFDF 22
Score = 37.7 bits (86), Expect(3) = 6e-09
Identities = 21/37 (56%), Positives = 27/37 (72%), Gaps = 3/37 (8%)
Frame = -1
Query: 362 AVDLTSYWIVQHDAVIR--RRNPHLRSTFC-TVALFS 261
A+DL S+WIVQH+ ++ RNPHLR TF T+ LFS
Sbjct: 29 AIDL-SFWIVQHETALKSNARNPHLRLTFFRTINLFS 64
Score = 26.6 bits (57), Expect(3) = 6e-09
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2
Query: 142 RFGADPVFTVDEEASPLK 89
+FGA PVF +D SPLK
Sbjct: 65 KFGAFPVFVIDGTPSPLK 82
>gb|EXC33535.1| Flap endonuclease GEN-like 1 [Morus notabilis]
Length = 661
Score = 41.2 bits (95), Expect(3) = 1e-08
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3
Query: 429 GRFWDLLKPYARNEGVDF 376
G+FWDLLKPYARNEG DF
Sbjct: 5 GKFWDLLKPYARNEGFDF 22
Score = 36.6 bits (83), Expect(3) = 1e-08
Identities = 20/36 (55%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
Frame = -1
Query: 359 VDLTSYWIVQHDAVIR--RRNPHLRSTFC-TVALFS 261
+DL S+WIVQH+ ++ RNPHLR TF T+ LFS
Sbjct: 30 IDL-SFWIVQHETALKSNARNPHLRLTFLRTINLFS 64
Score = 26.6 bits (57), Expect(3) = 1e-08
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2
Query: 142 RFGADPVFTVDEEASPLK 89
+FGA PVF +D SPLK
Sbjct: 65 KFGAFPVFVIDGTPSPLK 82
>gb|EMJ20325.1| hypothetical protein PRUPE_ppa015861mg [Prunus persica]
Length = 611
Score = 39.3 bits (90), Expect(3) = 2e-08
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = -3
Query: 429 GRFWDLLKPYARNEGVDF 376
G+FWDLLKPYAR+EG DF
Sbjct: 5 GKFWDLLKPYARHEGFDF 22
Score = 37.4 bits (85), Expect(3) = 2e-08
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 3/37 (8%)
Frame = -1
Query: 362 AVDLTSYWIVQHDAVI--RRRNPHLRSTFC-TVALFS 261
AVDL S+W+VQH+ I R R+PHLR TF T+ LFS
Sbjct: 29 AVDL-SFWLVQHETAIKDRARSPHLRLTFFRTINLFS 64
Score = 27.3 bits (59), Expect(3) = 2e-08
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2
Query: 142 RFGADPVFTVDEEASPLK 89
+FGA PVF VD SPLK
Sbjct: 65 KFGAFPVFVVDGSPSPLK 82
>ref|XP_002320770.2| hypothetical protein POPTR_0014s07330g [Populus trichocarpa]
gi|550323704|gb|EEE99085.2| hypothetical protein
POPTR_0014s07330g [Populus trichocarpa]
Length = 615
Score = 38.9 bits (89), Expect(3) = 3e-08
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = -3
Query: 429 GRFWDLLKPYARNEGVDF 376
G+FWDLLKPYAR+EG DF
Sbjct: 5 GKFWDLLKPYARHEGPDF 22
Score = 37.7 bits (86), Expect(3) = 3e-08
Identities = 23/38 (60%), Positives = 26/38 (68%), Gaps = 4/38 (10%)
Frame = -1
Query: 362 AVDLTSYWIVQHDAVIRR---RNPHLRSTFC-TVALFS 261
AVDL SYWIVQH+ I+ R PHLR TF T+ LFS
Sbjct: 29 AVDL-SYWIVQHETAIKATHVRKPHLRLTFFRTINLFS 65
Score = 26.6 bits (57), Expect(3) = 3e-08
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2
Query: 142 RFGADPVFTVDEEASPLK 89
+FGA PVF VD SPLK
Sbjct: 66 KFGALPVFVVDGTPSPLK 83
>gb|EXB38154.1| Flap endonuclease GEN-like 1 [Morus notabilis]
Length = 200
Score = 41.2 bits (95), Expect(3) = 3e-08
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3
Query: 429 GRFWDLLKPYARNEGVDF 376
G+FWDLLKPYARNEG DF
Sbjct: 5 GKFWDLLKPYARNEGFDF 22
Score = 35.4 bits (80), Expect(3) = 3e-08
Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 3/37 (8%)
Frame = -1
Query: 362 AVDLTSYWIVQHDAVIRR--RNPHLRSTFC-TVALFS 261
A+DL +WIVQH+ ++ RNPHLR TF T+ LFS
Sbjct: 29 AIDLF-FWIVQHETALKSNARNPHLRLTFFHTINLFS 64
Score = 26.6 bits (57), Expect(3) = 3e-08
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2
Query: 142 RFGADPVFTVDEEASPLK 89
+FGA PVF +D SPLK
Sbjct: 65 KFGAFPVFVIDGTPSPLK 82
>gb|EOX96099.1| 5'-3' exonuclease family protein, putative isoform 1 [Theobroma
cacao]
Length = 611
Score = 39.7 bits (91), Expect(3) = 4e-08
Identities = 23/37 (62%), Positives = 27/37 (72%), Gaps = 3/37 (8%)
Frame = -1
Query: 362 AVDLTSYWIVQHDAVI--RRRNPHLRSTFC-TVALFS 261
A+DL S+WIVQH+ I R RNPHLR TF T+ LFS
Sbjct: 29 AIDL-SFWIVQHETAIKNRARNPHLRLTFFRTINLFS 64
Score = 37.4 bits (85), Expect(3) = 4e-08
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -3
Query: 429 GRFWDLLKPYARNEGVDF 376
G+FW+LLKPYAR EG DF
Sbjct: 5 GKFWELLKPYARREGFDF 22
Score = 25.8 bits (55), Expect(3) = 4e-08
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2
Query: 142 RFGADPVFTVDEEASPLK 89
+FGA PVF +D SPLK
Sbjct: 65 KFGAFPVFVLDGTPSPLK 82
>ref|XP_006445167.1| hypothetical protein CICLE_v10019320mg [Citrus clementina]
gi|568875840|ref|XP_006490998.1| PREDICTED: flap
endonuclease GEN-like 1-like isoform X1 [Citrus
sinensis] gi|557547429|gb|ESR58407.1| hypothetical
protein CICLE_v10019320mg [Citrus clementina]
Length = 621
Score = 38.5 bits (88), Expect(3) = 6e-08
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = -3
Query: 429 GRFWDLLKPYARNEGVDF 376
G+FWDLLKPYAR EG+DF
Sbjct: 5 GKFWDLLKPYARFEGLDF 22
Score = 36.2 bits (82), Expect(3) = 6e-08
Identities = 21/38 (55%), Positives = 27/38 (71%), Gaps = 4/38 (10%)
Frame = -1
Query: 362 AVDLTSYWIVQHDAVIRRRN---PHLRSTFC-TVALFS 261
AVDL SYWIVQH+ I++ + PHLR TF T+ LF+
Sbjct: 29 AVDL-SYWIVQHETAIKKNSVPKPHLRLTFFRTINLFA 65
Score = 27.3 bits (59), Expect(3) = 6e-08
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 151 ILLRFGADPVFTVDEEASPLK 89
+ +FGA PVF VD SPLK
Sbjct: 63 LFAKFGAFPVFVVDGTPSPLK 83
>ref|XP_006445168.1| hypothetical protein CICLE_v10019320mg [Citrus clementina]
gi|568875842|ref|XP_006490999.1| PREDICTED: flap
endonuclease GEN-like 1-like isoform X2 [Citrus
sinensis] gi|557547430|gb|ESR58408.1| hypothetical
protein CICLE_v10019320mg [Citrus clementina]
Length = 614
Score = 38.5 bits (88), Expect(3) = 6e-08
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = -3
Query: 429 GRFWDLLKPYARNEGVDF 376
G+FWDLLKPYAR EG+DF
Sbjct: 5 GKFWDLLKPYARFEGLDF 22
Score = 36.2 bits (82), Expect(3) = 6e-08
Identities = 21/38 (55%), Positives = 27/38 (71%), Gaps = 4/38 (10%)
Frame = -1
Query: 362 AVDLTSYWIVQHDAVIRRRN---PHLRSTFC-TVALFS 261
AVDL SYWIVQH+ I++ + PHLR TF T+ LF+
Sbjct: 29 AVDL-SYWIVQHETAIKKNSVPKPHLRLTFFRTINLFA 65
Score = 27.3 bits (59), Expect(3) = 6e-08
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 151 ILLRFGADPVFTVDEEASPLK 89
+ +FGA PVF VD SPLK
Sbjct: 63 LFAKFGAFPVFVVDGTPSPLK 83
>ref|XP_006602772.1| PREDICTED: flap endonuclease GEN-like 1-like [Glycine max]
Length = 606
Score = 38.1 bits (87), Expect(3) = 6e-08
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -3
Query: 429 GRFWDLLKPYARNEGVDF 376
G FWDLLKPYAR EG DF
Sbjct: 5 GNFWDLLKPYARKEGFDF 22
Score = 37.7 bits (86), Expect(3) = 6e-08
Identities = 23/38 (60%), Positives = 27/38 (71%), Gaps = 4/38 (10%)
Frame = -1
Query: 362 AVDLTSYWIVQHDAVIRR---RNPHLRSTFC-TVALFS 261
AVDL S+WIVQH+ I+ RNPHLR TF T+ LFS
Sbjct: 29 AVDL-SFWIVQHENAIKATHVRNPHLRLTFFRTINLFS 65
Score = 26.2 bits (56), Expect(3) = 6e-08
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2
Query: 142 RFGADPVFTVDEEASPLK 89
+FGA PVF VD SPLK
Sbjct: 66 KFGALPVFIVDGTPSPLK 83
>ref|XP_004306852.1| PREDICTED: flap endonuclease GEN-like 1-like [Fragaria vesca subsp.
vesca]
Length = 626
Score = 39.3 bits (90), Expect(3) = 2e-07
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = -3
Query: 429 GRFWDLLKPYARNEGVDF 376
G+FWDLLKPYAR+EG DF
Sbjct: 22 GKFWDLLKPYARHEGFDF 39
Score = 37.0 bits (84), Expect(3) = 2e-07
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 3/37 (8%)
Frame = -1
Query: 362 AVDLTSYWIVQHDAVI--RRRNPHLRSTFC-TVALFS 261
AVDL S+WIVQH+ I R R+PHLR TF T+ LF+
Sbjct: 46 AVDL-SFWIVQHETAIKARARSPHLRLTFFRTINLFA 81
Score = 24.3 bits (51), Expect(3) = 2e-07
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 151 ILLRFGADPVFTVDEEASPLK 89
+ +FGA PVF VD S LK
Sbjct: 79 LFAKFGAFPVFVVDGNPSHLK 99
>ref|XP_006339484.1| PREDICTED: flap endonuclease GEN-like 1-like [Solanum tuberosum]
Length = 603
Score = 37.4 bits (85), Expect(3) = 2e-07
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -3
Query: 429 GRFWDLLKPYARNEGVDF 376
G FWDLLKPYAR EG DF
Sbjct: 5 GNFWDLLKPYARAEGFDF 22
Score = 35.4 bits (80), Expect(3) = 2e-07
Identities = 21/37 (56%), Positives = 26/37 (70%), Gaps = 3/37 (8%)
Frame = -1
Query: 362 AVDLTSYWIVQHDAVIRR--RNPHLRSTFC-TVALFS 261
AVDL SYWIVQ + ++ RNPH+R TF T+ LFS
Sbjct: 29 AVDL-SYWIVQQETALKGQIRNPHIRLTFFRTINLFS 64
Score = 27.3 bits (59), Expect(3) = 2e-07
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2
Query: 142 RFGADPVFTVDEEASPLK 89
+FGA PVF D ASPLK
Sbjct: 65 KFGAFPVFVTDGTASPLK 82
>ref|XP_004229854.1| PREDICTED: flap endonuclease GEN-like 1-like [Solanum lycopersicum]
Length = 603
Score = 37.4 bits (85), Expect(3) = 2e-07
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -3
Query: 429 GRFWDLLKPYARNEGVDF 376
G FWDLLKPYAR EG DF
Sbjct: 5 GNFWDLLKPYARPEGFDF 22
Score = 35.4 bits (80), Expect(3) = 2e-07
Identities = 21/37 (56%), Positives = 26/37 (70%), Gaps = 3/37 (8%)
Frame = -1
Query: 362 AVDLTSYWIVQHDAVIRR--RNPHLRSTFC-TVALFS 261
AVDL SYWIVQ + ++ RNPH+R TF T+ LFS
Sbjct: 29 AVDL-SYWIVQQETALKGQIRNPHIRLTFFRTINLFS 64
Score = 27.3 bits (59), Expect(3) = 2e-07
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2
Query: 142 RFGADPVFTVDEEASPLK 89
+FGA PVF D ASPLK
Sbjct: 65 KFGAYPVFVTDGTASPLK 82
>ref|XP_004492689.1| PREDICTED: flap endonuclease GEN-like 1-like [Cicer arietinum]
Length = 616
Score = 40.4 bits (93), Expect(3) = 4e-07
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -3
Query: 429 GRFWDLLKPYARNEGVDF 376
G FWDLLKPYARNEG DF
Sbjct: 5 GNFWDLLKPYARNEGFDF 22
Score = 32.0 bits (71), Expect(3) = 4e-07
Identities = 21/37 (56%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Frame = -1
Query: 362 AVDLTSYWIVQHDAVIRR--RNPHLRSTFC-TVALFS 261
AVDL S WIVQH+ I+ R PHLR F T+ LFS
Sbjct: 29 AVDL-SLWIVQHENAIKTHVRKPHLRLLFFRTINLFS 64
Score = 26.9 bits (58), Expect(3) = 4e-07
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2
Query: 142 RFGADPVFTVDEEASPLK 89
+FGA PVF VD SPLK
Sbjct: 65 KFGAFPVFVVDGTPSPLK 82
>ref|XP_003623847.1| Flap endonuclease GEN-like protein [Medicago truncatula]
gi|124360235|gb|ABN08248.1| Helix-hairpin-helix motif,
class 2 [Medicago truncatula]
gi|355498862|gb|AES80065.1| Flap endonuclease GEN-like
protein [Medicago truncatula]
Length = 612
Score = 37.7 bits (86), Expect(3) = 6e-07
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -3
Query: 429 GRFWDLLKPYARNEGVDF 376
G FW+LLKPY+RNEG DF
Sbjct: 5 GNFWELLKPYSRNEGFDF 22
Score = 33.9 bits (76), Expect(3) = 6e-07
Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 3/37 (8%)
Frame = -1
Query: 362 AVDLTSYWIVQHDAVIRR--RNPHLRSTFC-TVALFS 261
A+DL S+WIVQH+ I+ + PHLR TF T+ LFS
Sbjct: 29 AIDL-SFWIVQHNNAIKTHVKKPHLRLTFFRTINLFS 64
Score = 26.9 bits (58), Expect(3) = 6e-07
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2
Query: 142 RFGADPVFTVDEEASPLK 89
+FGA PVF VD SPLK
Sbjct: 65 KFGAFPVFVVDGTPSPLK 82
>ref|XP_004144985.1| PREDICTED: flap endonuclease GEN-like 1-like [Cucumis sativus]
gi|449472478|ref|XP_004153607.1| PREDICTED: flap
endonuclease GEN-like 1-like [Cucumis sativus]
gi|449516535|ref|XP_004165302.1| PREDICTED: flap
endonuclease GEN-like 1-like [Cucumis sativus]
Length = 606
Score = 36.6 bits (83), Expect(3) = 6e-07
Identities = 21/37 (56%), Positives = 27/37 (72%), Gaps = 3/37 (8%)
Frame = -1
Query: 362 AVDLTSYWIVQHDAVIR--RRNPHLRSTFC-TVALFS 261
AVDL S+WIVQH+ I+ R+PHLR TF T+ LF+
Sbjct: 29 AVDL-SFWIVQHETAIKSTARSPHLRLTFFRTITLFA 64
Score = 34.7 bits (78), Expect(3) = 6e-07
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = -3
Query: 429 GRFWDLLKPYARNEGVDF 376
G FWDLLKP AR EG DF
Sbjct: 5 GHFWDLLKPNARTEGFDF 22
Score = 27.3 bits (59), Expect(3) = 6e-07
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 151 ILLRFGADPVFTVDEEASPLK 89
+ +FGA PVF VD SPLK
Sbjct: 62 LFAKFGAFPVFVVDGTPSPLK 82
>ref|XP_004957397.1| PREDICTED: flap endonuclease GEN-like 1-like isoform X1 [Setaria
italica]
Length = 634
Score = 34.7 bits (78), Expect(3) = 3e-06
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -3
Query: 429 GRFWDLLKPYARNEGVDF 376
G FWDLLKPYAR+EG +
Sbjct: 5 GSFWDLLKPYARHEGAGY 22
Score = 34.3 bits (77), Expect(3) = 3e-06
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 6/40 (15%)
Frame = -1
Query: 362 AVDLTSYWIVQHDAVIRRRN-----PHLRSTFC-TVALFS 261
AVDL S+W+V H IR R+ PHLR+TF T++LF+
Sbjct: 29 AVDL-SFWVVSHSTAIRARSPRARKPHLRTTFFRTLSLFA 67
Score = 27.3 bits (59), Expect(3) = 3e-06
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 151 ILLRFGADPVFTVDEEASPLK 89
+ + GA PVF VD E SPLK
Sbjct: 65 LFAKMGAFPVFVVDGEPSPLK 85
>ref|XP_002460545.1| hypothetical protein SORBIDRAFT_02g030290 [Sorghum bicolor]
gi|241923922|gb|EER97066.1| hypothetical protein
SORBIDRAFT_02g030290 [Sorghum bicolor]
Length = 590
Score = 34.7 bits (78), Expect(3) = 3e-06
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -3
Query: 429 GRFWDLLKPYARNEGVDF 376
G FWDLLKPYAR+EG +
Sbjct: 5 GSFWDLLKPYARHEGAGY 22
Score = 34.3 bits (77), Expect(3) = 3e-06
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 6/40 (15%)
Frame = -1
Query: 362 AVDLTSYWIVQHDAVI-----RRRNPHLRSTFC-TVALFS 261
AVDL S+W+V H I R R+PHLR+TF T++LF+
Sbjct: 29 AVDL-SFWVVSHSTAIRARLPRARSPHLRTTFFRTLSLFA 67
Score = 27.3 bits (59), Expect(3) = 3e-06
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 151 ILLRFGADPVFTVDEEASPLK 89
+ + GA PVF VD E SPLK
Sbjct: 65 LFAKMGAFPVFVVDGEPSPLK 85
>sp|Q64MA3.1|GENL1_ORYSJ RecName: Full=Flap endonuclease GEN-like 1; Short=OsGEN-L;
Short=Protein OsGEN-like; AltName: Full=OsRAD
gi|52075592|dbj|BAD46702.1| putative single-strand DNA
endonuclease-1 [Oryza sativa Japonica Group]
gi|62122402|dbj|BAD93194.1| putative nuclease [Oryza
sativa Japonica Group] gi|62122736|dbj|BAD93331.1|
putative nuclease [Oryza sativa Japonica Group]
gi|215693373|dbj|BAG88755.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222630495|gb|EEE62627.1| hypothetical protein
OsJ_17430 [Oryza sativa Japonica Group]
Length = 629
Score = 35.4 bits (80), Expect(3) = 4e-06
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 6/40 (15%)
Frame = -1
Query: 362 AVDLTSYWIVQHDAVIRRRNPHLRST------FCTVALFS 261
AVDL S+W+V H A IR R+PH R F T++LFS
Sbjct: 29 AVDL-SFWVVSHSAAIRARSPHARLPHLRTLFFRTLSLFS 67
Score = 34.7 bits (78), Expect(3) = 4e-06
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -3
Query: 429 GRFWDLLKPYARNEGVDF 376
G FWDLLKPYAR+EG +
Sbjct: 5 GSFWDLLKPYARHEGAGY 22
Score = 25.8 bits (55), Expect(3) = 4e-06
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2
Query: 142 RFGADPVFTVDEEASPLK 89
+ GA PVF VD + SPLK
Sbjct: 68 KMGAFPVFVVDGQPSPLK 85
>ref|XP_003578463.1| PREDICTED: flap endonuclease GEN-like 1-like [Brachypodium
distachyon]
Length = 639
Score = 35.4 bits (80), Expect(3) = 5e-06
Identities = 22/40 (55%), Positives = 27/40 (67%), Gaps = 6/40 (15%)
Frame = -1
Query: 362 AVDLTSYWIVQHDAVIR-----RRNPHLRSTFC-TVALFS 261
AVDL S+WIV H IR R+PHLR+TF T++LFS
Sbjct: 29 AVDL-SFWIVSHTTAIRARSPHARHPHLRTTFFRTLSLFS 67
Score = 34.3 bits (77), Expect(3) = 5e-06
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3
Query: 429 GRFWDLLKPYARNEGVDF 376
G FWDLLKPYAR EG +
Sbjct: 5 GSFWDLLKPYARQEGAGY 22
Score = 25.8 bits (55), Expect(3) = 5e-06
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2
Query: 142 RFGADPVFTVDEEASPLK 89
+ GA PVF VD + SPLK
Sbjct: 68 KMGAFPVFVVDGQPSPLK 85
>gb|EAZ09797.1| hypothetical protein OsI_32084 [Oryza sativa Indica Group]
Length = 630
Score = 35.0 bits (79), Expect(3) = 5e-06
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 6/40 (15%)
Frame = -1
Query: 362 AVDLTSYWIVQHDAVIRRRNPHLRST------FCTVALFS 261
AVDL S+W++ H A IR R+PH R F T++LFS
Sbjct: 29 AVDL-SFWVISHSAAIRARSPHARLPHLRTLFFRTLSLFS 67
Score = 34.7 bits (78), Expect(3) = 5e-06
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -3
Query: 429 GRFWDLLKPYARNEGVDF 376
G FWDLLKPYAR+EG +
Sbjct: 5 GSFWDLLKPYARHEGAGY 22
Score = 25.8 bits (55), Expect(3) = 5e-06
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2
Query: 142 RFGADPVFTVDEEASPLK 89
+ GA PVF VD + SPLK
Sbjct: 68 KMGAFPVFVVDGQPSPLK 85