BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00041072
         (413 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY76473.1| hypothetical protein OsI_04410 [Oryza sativa Indi...    59   9e-07
ref|NP_001044782.1| Os01g0844800 [Oryza sativa Japonica Group] g...    59   9e-07
dbj|BAB89558.1| putative pumilio domain-containing protein PPD1 ...    59   9e-07
gb|EMT17283.1| Pumilio-like protein [Aegilops tauschii]                58   1e-06
ref|XP_006486391.1| PREDICTED: pumilio homolog 1-like [Citrus si...    58   1e-06
ref|XP_006435648.1| hypothetical protein CICLE_v10030588mg [Citr...    58   1e-06
ref|XP_006435647.1| hypothetical protein CICLE_v10030588mg [Citr...    58   1e-06
ref|XP_006435646.1| hypothetical protein CICLE_v10030588mg [Citr...    58   1e-06
gb|EOY18067.1| Pumilio 2 isoform 4, partial [Theobroma cacao]          57   3e-06
gb|EOY18066.1| Pumilio 2 isoform 3, partial [Theobroma cacao]          57   3e-06
gb|EOY18064.1| Pumilio 2 isoform 1 [Theobroma cacao]                   57   3e-06
gb|EMS59607.1| Pumilio-like protein 2 [Triticum urartu]                57   3e-06
ref|XP_002278108.2| PREDICTED: pumilio homolog 1-like [Vitis vin...    55   1e-05

>gb|EAY76473.1| hypothetical protein OsI_04410 [Oryza sativa Indica Group]
          Length = 1046

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 1/136 (0%)
 Frame = -2

Query: 406 GLLLRRQMSFADVVQHEVVYEXXXXXXXXXXXXHNAFANGLEQLASSSTHFASHK-VCTL 230
           GL L RQ SFAD++Q  +                N+F +  E L S+ + ++ H  +   
Sbjct: 192 GLSLGRQRSFADILQDNIGRRTPASEHPSRAVSRNSFLDNQELLNSADSQYSMHNDILEA 251

Query: 229 DGEGFSAKSDNGHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARATSLCFPQIGSRIDT 50
                + ++ +G   +  S    +ASV+ SS+ R+ T D+ +  R  S   P +G RI++
Sbjct: 252 QRAVGNVQNVSGLPSINASTSQTFASVLGSSISRNATPDSHYVPRVPSPGLPPVGVRINS 311

Query: 49  PDRITQSSSSFNVLPS 2
            ++    SSSFN   S
Sbjct: 312 NEKKLNCSSSFNTASS 327


>ref|NP_001044782.1| Os01g0844800 [Oryza sativa Japonica Group]
           gi|113534313|dbj|BAF06696.1| Os01g0844800 [Oryza sativa
           Japonica Group] gi|215704672|dbj|BAG94300.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 1060

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 1/136 (0%)
 Frame = -2

Query: 406 GLLLRRQMSFADVVQHEVVYEXXXXXXXXXXXXHNAFANGLEQLASSSTHFASHK-VCTL 230
           GL L RQ SFAD++Q  +                N+F +  E L S+ + ++ H  +   
Sbjct: 206 GLSLGRQRSFADILQDNIGRRTPASEHPSRAVSRNSFLDNQELLNSADSQYSMHNDILEA 265

Query: 229 DGEGFSAKSDNGHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARATSLCFPQIGSRIDT 50
                + ++ +G   +  S    +ASV+ SS+ R+ T D+ +  R  S   P +G RI++
Sbjct: 266 QRAVGNVQNVSGLPSINASASQTFASVLGSSISRNATPDSHYVPRVPSPGLPPVGVRINS 325

Query: 49  PDRITQSSSSFNVLPS 2
            ++    SSSFN   S
Sbjct: 326 NEKKLNCSSSFNTASS 341


>dbj|BAB89558.1| putative pumilio domain-containing protein PPD1 [Oryza sativa
           Japonica Group] gi|125572616|gb|EAZ14131.1| hypothetical
           protein OsJ_04054 [Oryza sativa Japonica Group]
          Length = 1048

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 1/136 (0%)
 Frame = -2

Query: 406 GLLLRRQMSFADVVQHEVVYEXXXXXXXXXXXXHNAFANGLEQLASSSTHFASHK-VCTL 230
           GL L RQ SFAD++Q  +                N+F +  E L S+ + ++ H  +   
Sbjct: 194 GLSLGRQRSFADILQDNIGRRTPASEHPSRAVSRNSFLDNQELLNSADSQYSMHNDILEA 253

Query: 229 DGEGFSAKSDNGHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARATSLCFPQIGSRIDT 50
                + ++ +G   +  S    +ASV+ SS+ R+ T D+ +  R  S   P +G RI++
Sbjct: 254 QRAVGNVQNVSGLPSINASASQTFASVLGSSISRNATPDSHYVPRVPSPGLPPVGVRINS 313

Query: 49  PDRITQSSSSFNVLPS 2
            ++    SSSFN   S
Sbjct: 314 NEKKLNCSSSFNTASS 329


>gb|EMT17283.1| Pumilio-like protein [Aegilops tauschii]
          Length = 946

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
 Frame = -2

Query: 406 GLLLRRQMSFADVVQHEVVYEXXXXXXXXXXXXHNAFANGLEQLASSSTHFASHKVCTLD 227
           GL L RQ SFAD+ Q  +                N+F +  E +  S   ++ H   T+D
Sbjct: 131 GLSLGRQRSFADMFQDNLGRRTPTSEHSSRAASRNSFLDNQESVDPSENQYSLHND-TMD 189

Query: 226 GEGF--SAKSDNGHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARATSLCFPQIGSRID 53
            +    +A+S  G   +  S    +ASV+ SS  R+ T D+ +  R  S   P +G+RI 
Sbjct: 190 AQRSVGNAQSVGGLSSINASASQTFASVLGSSASRNATPDSHYIPRVPSPGLPPVGARIS 249

Query: 52  TPD-RITQSSSSFNVLPS 2
           + + R+  SSSSFN + S
Sbjct: 250 SNEKRLNCSSSSFNTVSS 267


>ref|XP_006486391.1| PREDICTED: pumilio homolog 1-like [Citrus sinensis]
          Length = 1034

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
 Frame = -2

Query: 391 RQMSFADVVQHEVVYEXXXXXXXXXXXXHNAFANGLEQLASSSTHFAS--HKVCTLDGEG 218
           RQ S A+++Q ++ +              NAF + +E   SS T FA   H + ++DG G
Sbjct: 186 RQKSIAEIIQDDMSHGAPVSRHPSRPPSRNAFEDAIE---SSETQFAHLHHDLSSIDGLG 242

Query: 217 FSAKSDN--GHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARATSLCFPQIG 65
            SA        + VGTS  H+YAS + +SL RS T D +  ARA S   P  G
Sbjct: 243 SSANKQGMPSAQSVGTSASHSYASALGASLSRSTTPDPQLMARAPSPRIPTAG 295


>ref|XP_006435648.1| hypothetical protein CICLE_v10030588mg [Citrus clementina]
           gi|557537844|gb|ESR48888.1| hypothetical protein
           CICLE_v10030588mg [Citrus clementina]
          Length = 904

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
 Frame = -2

Query: 391 RQMSFADVVQHEVVYEXXXXXXXXXXXXHNAFANGLEQLASSSTHFAS--HKVCTLDGEG 218
           RQ S A+++Q ++ +              NAF + +E   SS T FA   H + ++DG G
Sbjct: 186 RQKSIAEIIQDDMSHGAPVSRHPSRPPSRNAFEDAIE---SSETQFAHLHHDLSSIDGLG 242

Query: 217 FSAKSDN--GHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARATSLCFPQIG 65
            SA        + VGTS  H+YAS + +SL RS T D +  ARA S   P  G
Sbjct: 243 SSANKQGMPSAQSVGTSASHSYASALGASLSRSTTPDPQLMARAPSPRIPTAG 295


>ref|XP_006435647.1| hypothetical protein CICLE_v10030588mg [Citrus clementina]
           gi|557537843|gb|ESR48887.1| hypothetical protein
           CICLE_v10030588mg [Citrus clementina]
          Length = 967

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
 Frame = -2

Query: 391 RQMSFADVVQHEVVYEXXXXXXXXXXXXHNAFANGLEQLASSSTHFAS--HKVCTLDGEG 218
           RQ S A+++Q ++ +              NAF + +E   SS T FA   H + ++DG G
Sbjct: 186 RQKSIAEIIQDDMSHGAPVSRHPSRPPSRNAFEDAIE---SSETQFAHLHHDLSSIDGLG 242

Query: 217 FSAKSDN--GHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARATSLCFPQIG 65
            SA        + VGTS  H+YAS + +SL RS T D +  ARA S   P  G
Sbjct: 243 SSANKQGMPSAQSVGTSASHSYASALGASLSRSTTPDPQLMARAPSPRIPTAG 295


>ref|XP_006435646.1| hypothetical protein CICLE_v10030588mg [Citrus clementina]
           gi|557537842|gb|ESR48886.1| hypothetical protein
           CICLE_v10030588mg [Citrus clementina]
          Length = 1034

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
 Frame = -2

Query: 391 RQMSFADVVQHEVVYEXXXXXXXXXXXXHNAFANGLEQLASSSTHFAS--HKVCTLDGEG 218
           RQ S A+++Q ++ +              NAF + +E   SS T FA   H + ++DG G
Sbjct: 186 RQKSIAEIIQDDMSHGAPVSRHPSRPPSRNAFEDAIE---SSETQFAHLHHDLSSIDGLG 242

Query: 217 FSAKSDN--GHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARATSLCFPQIG 65
            SA        + VGTS  H+YAS + +SL RS T D +  ARA S   P  G
Sbjct: 243 SSANKQGMPSAQSVGTSASHSYASALGASLSRSTTPDPQLMARAPSPRIPTAG 295


>gb|EOY18067.1| Pumilio 2 isoform 4, partial [Theobroma cacao]
          Length = 698

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 48/140 (34%), Positives = 66/140 (47%), Gaps = 5/140 (3%)
 Frame = -2

Query: 406 GLLLRRQMSFADVVQHEVVYEXXXXXXXXXXXXHNAFANGLEQLASSSTHFAS--HKVCT 233
           G L  RQ S A++ Q ++ +              NAF +G     SS   FA+  H++ +
Sbjct: 163 GGLGTRQKSIAEIFQDDINHVTNASRHPSRPASRNAFDDGN---GSSEAQFANLHHELTS 219

Query: 232 LDGEGFSAKSDN--GHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARATSLCFPQIGSR 59
           +D    SA        + VG+S  H YAS +  SL RS T D + AARA S   P IG R
Sbjct: 220 VDALRSSANKPGMPSVQNVGSSASHTYASALGLSLSRSTTPDPQLAARAPSPRIPPIGGR 279

Query: 58  IDTPD-RITQSSSSFNVLPS 2
             + D R    S+SFN + S
Sbjct: 280 SSSMDKRSVTGSNSFNGVSS 299


>gb|EOY18066.1| Pumilio 2 isoform 3, partial [Theobroma cacao]
          Length = 710

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 48/140 (34%), Positives = 66/140 (47%), Gaps = 5/140 (3%)
 Frame = -2

Query: 406 GLLLRRQMSFADVVQHEVVYEXXXXXXXXXXXXHNAFANGLEQLASSSTHFAS--HKVCT 233
           G L  RQ S A++ Q ++ +              NAF +G     SS   FA+  H++ +
Sbjct: 163 GGLGTRQKSIAEIFQDDINHVTNASRHPSRPASRNAFDDGN---GSSEAQFANLHHELTS 219

Query: 232 LDGEGFSAKSDN--GHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARATSLCFPQIGSR 59
           +D    SA        + VG+S  H YAS +  SL RS T D + AARA S   P IG R
Sbjct: 220 VDALRSSANKPGMPSVQNVGSSASHTYASALGLSLSRSTTPDPQLAARAPSPRIPPIGGR 279

Query: 58  IDTPD-RITQSSSSFNVLPS 2
             + D R    S+SFN + S
Sbjct: 280 SSSMDKRSVTGSNSFNGVSS 299


>gb|EOY18064.1| Pumilio 2 isoform 1 [Theobroma cacao]
          Length = 1016

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 48/140 (34%), Positives = 66/140 (47%), Gaps = 5/140 (3%)
 Frame = -2

Query: 406 GLLLRRQMSFADVVQHEVVYEXXXXXXXXXXXXHNAFANGLEQLASSSTHFAS--HKVCT 233
           G L  RQ S A++ Q ++ +              NAF +G     SS   FA+  H++ +
Sbjct: 163 GGLGTRQKSIAEIFQDDINHVTNASRHPSRPASRNAFDDGN---GSSEAQFANLHHELTS 219

Query: 232 LDGEGFSAKSDN--GHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARATSLCFPQIGSR 59
           +D    SA        + VG+S  H YAS +  SL RS T D + AARA S   P IG R
Sbjct: 220 VDALRSSANKPGMPSVQNVGSSASHTYASALGLSLSRSTTPDPQLAARAPSPRIPPIGGR 279

Query: 58  IDTPD-RITQSSSSFNVLPS 2
             + D R    S+SFN + S
Sbjct: 280 SSSMDKRSVTGSNSFNGVSS 299


>gb|EMS59607.1| Pumilio-like protein 2 [Triticum urartu]
          Length = 1001

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
 Frame = -2

Query: 406 GLLLRRQMSFADVVQHEVVYEXXXXXXXXXXXXHNAFANGLEQLASSSTHFASHKVCTLD 227
           GL L RQ SFA + Q  +                N+F +  E +  S   ++ H   T+D
Sbjct: 136 GLSLGRQRSFAYMFQDNLGRRTPTSEHSSRAASRNSFLDNQESVDPSENQYSLHND-TMD 194

Query: 226 GEGF--SAKSDNGHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARATSLCFPQIGSRID 53
            +    +A+S  G   +  S    +ASV+ SS  RS T D+ +  R  S   P +G+RI+
Sbjct: 195 AQRSVGNAQSVGGLSSINASASQTFASVLGSSASRSATPDSHYIPRVPSPGLPPVGARIN 254

Query: 52  TPD-RITQSSSSFNVLPS 2
           + + R+  SSSSFN + S
Sbjct: 255 SNEKRLNCSSSSFNTISS 272


>ref|XP_002278108.2| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
          Length = 1015

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
 Frame = -2

Query: 391 RQMSFADVVQHEVVYEXXXXXXXXXXXXHNAFANGLEQLASSSTHFASHKVCTLDG--EG 218
           RQ S A+++Q ++ +              NAF + +E   +  +H   H++ ++D    G
Sbjct: 203 RQKSLAEIIQDDIGHATSVSRHPSRPASRNAFDDNVETSEAQFSHL-HHELASMDALRSG 261

Query: 217 FSAKSDNGHEKVGTSFCHNYASVVSSSLQRSNTMDTKHAARATSLCFPQI-GSRIDTPD- 44
              ++ +  + V +S  H YAS + +SL RS T D +  ARA S   P + G R  + D 
Sbjct: 262 TKIQAISAVQNVASSASHTYASALGASLSRSTTPDPQLVARAPSPRIPTVGGGRTSSMDK 321

Query: 43  RITQSSSSFNVLP 5
           R    S+SFN +P
Sbjct: 322 RSGNGSNSFNSVP 334