BLASTX nr result
ID: Zingiber25_contig00040888
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00040888
(451 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004985532.1| PREDICTED: transcription factor bHLH135-like... 135 7e-30
ref|NP_001149761.1| DNA binding protein [Zea mays] gi|242042055|... 132 6e-29
ref|NP_001151208.1| LOC100284841 [Zea mays] gi|195645018|gb|ACG4... 130 1e-28
ref|NP_001049114.1| Os03g0171700 [Oryza sativa Japonica Group] g... 130 2e-28
ref|XP_006649478.1| PREDICTED: transcription factor bHLH135-like... 127 1e-27
dbj|BAJ91340.1| predicted protein [Hordeum vulgare subsp. vulgare] 127 2e-27
ref|XP_003558707.1| PREDICTED: transcription factor bHLH135-like... 125 6e-27
gb|EMT13985.1| hypothetical protein F775_15902 [Aegilops tauschii] 125 7e-27
ref|XP_003564054.1| PREDICTED: transcription factor bHLH135-like... 120 2e-25
gb|AAM74282.1|AC083943_22 Hypothetical protein similar to putati... 117 2e-24
ref|XP_004953911.1| PREDICTED: transcription factor bHLH135-like... 115 6e-24
ref|XP_002452552.1| hypothetical protein SORBIDRAFT_04g027930 [S... 115 6e-24
ref|XP_004983139.1| PREDICTED: transcription factor bHLH135-like... 115 8e-24
ref|NP_001152510.1| DNA binding protein [Zea mays] gi|195657019|... 114 1e-23
ref|XP_006661756.1| PREDICTED: transcription factor bHLH135-like... 113 2e-23
ref|XP_003570648.1| PREDICTED: transcription factor bHLH135-like... 111 9e-23
ref|NP_001152393.1| DNA binding protein [Zea mays] gi|195655845|... 111 9e-23
dbj|BAK06826.1| predicted protein [Hordeum vulgare subsp. vulgare] 110 1e-22
gb|EMT32161.1| Transcription factor bHLH135 [Aegilops tauschii] 110 2e-22
dbj|BAD16450.1| DNA binding protein-like [Oryza sativa Japonica ... 110 2e-22
>ref|XP_004985532.1| PREDICTED: transcription factor bHLH135-like [Setaria italica]
Length = 85
Score = 135 bits (339), Expect = 7e-30
Identities = 70/85 (82%), Positives = 76/85 (89%)
Frame = +1
Query: 4 MSGRGRRITDEEINELISKLQALLPAESRRRNAGRMSASKLLKETCSYIKSLHREVDGLS 183
MSGR RI+D+EINELISKLQALLP SRRRNA R SASKLLKETCSYIKSLHREVD LS
Sbjct: 1 MSGRRGRISDDEINELISKLQALLPESSRRRNASRSSASKLLKETCSYIKSLHREVDDLS 60
Query: 184 DRLAGLMDTMDSNSPQAEIIRGLLR 258
+RL+GLM TMD++SPQAEIIR LLR
Sbjct: 61 ERLSGLMSTMDNDSPQAEIIRSLLR 85
>ref|NP_001149761.1| DNA binding protein [Zea mays] gi|242042055|ref|XP_002468422.1|
hypothetical protein SORBIDRAFT_01g045690 [Sorghum
bicolor] gi|195632534|gb|ACG36703.1| DNA binding protein
[Zea mays] gi|241922276|gb|EER95420.1| hypothetical
protein SORBIDRAFT_01g045690 [Sorghum bicolor]
gi|414865074|tpg|DAA43631.1| TPA: putative HLH
DNA-binding domain superfamily protein [Zea mays]
Length = 86
Score = 132 bits (331), Expect = 6e-29
Identities = 68/84 (80%), Positives = 75/84 (89%)
Frame = +1
Query: 7 SGRGRRITDEEINELISKLQALLPAESRRRNAGRMSASKLLKETCSYIKSLHREVDGLSD 186
SGR RI+D+EINELISKLQALLP SRRRNA R SASKLLKETC+YIKSLHREVD LS+
Sbjct: 3 SGRRGRISDDEINELISKLQALLPESSRRRNASRSSASKLLKETCAYIKSLHREVDDLSE 62
Query: 187 RLAGLMDTMDSNSPQAEIIRGLLR 258
RL+GLM TMD++SPQAEIIR LLR
Sbjct: 63 RLSGLMSTMDNDSPQAEIIRSLLR 86
>ref|NP_001151208.1| LOC100284841 [Zea mays] gi|195645018|gb|ACG41977.1| DNA binding
protein [Zea mays] gi|413956872|gb|AFW89521.1| putative
HLH DNA-binding domain superfamily protein [Zea mays]
Length = 87
Score = 130 bits (328), Expect = 1e-28
Identities = 66/83 (79%), Positives = 75/83 (90%)
Frame = +1
Query: 10 GRGRRITDEEINELISKLQALLPAESRRRNAGRMSASKLLKETCSYIKSLHREVDGLSDR 189
GR RI+D+EINELISKLQALLP SRRRNA R SASKLLKETC+Y+KSLHREVD LS+R
Sbjct: 5 GRRGRISDDEINELISKLQALLPESSRRRNASRSSASKLLKETCAYVKSLHREVDDLSER 64
Query: 190 LAGLMDTMDSNSPQAEIIRGLLR 258
L+GLM+TMD++SPQAEIIR LLR
Sbjct: 65 LSGLMETMDNDSPQAEIIRSLLR 87
>ref|NP_001049114.1| Os03g0171700 [Oryza sativa Japonica Group]
gi|108706426|gb|ABF94221.1| bHLH family protein,
putative, expressed [Oryza sativa Japonica Group]
gi|113547585|dbj|BAF11028.1| Os03g0171700 [Oryza sativa
Japonica Group] gi|125542586|gb|EAY88725.1| hypothetical
protein OsI_10202 [Oryza sativa Indica Group]
gi|125585087|gb|EAZ25751.1| hypothetical protein
OsJ_09590 [Oryza sativa Japonica Group]
gi|215768855|dbj|BAH01084.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 91
Score = 130 bits (327), Expect = 2e-28
Identities = 69/83 (83%), Positives = 71/83 (85%)
Frame = +1
Query: 10 GRGRRITDEEINELISKLQALLPAESRRRNAGRMSASKLLKETCSYIKSLHREVDGLSDR 189
G G RITDEEINELISKLQALLP SR R A R SASKLLKETCSYIKSLHREVD LSDR
Sbjct: 9 GGGGRITDEEINELISKLQALLPESSRSRGASRSSASKLLKETCSYIKSLHREVDDLSDR 68
Query: 190 LAGLMDTMDSNSPQAEIIRGLLR 258
L+ LM TMD+NSPQAEIIR LLR
Sbjct: 69 LSELMSTMDNNSPQAEIIRSLLR 91
>ref|XP_006649478.1| PREDICTED: transcription factor bHLH135-like [Oryza brachyantha]
Length = 87
Score = 127 bits (320), Expect = 1e-27
Identities = 70/87 (80%), Positives = 72/87 (82%), Gaps = 2/87 (2%)
Frame = +1
Query: 4 MSGR--GRRITDEEINELISKLQALLPAESRRRNAGRMSASKLLKETCSYIKSLHREVDG 177
MS R G RITDEEINELISKLQALLP SR R R SASKLLKETCSYIKSLHREVD
Sbjct: 1 MSSRRGGGRITDEEINELISKLQALLPESSRSRGTSRSSASKLLKETCSYIKSLHREVDD 60
Query: 178 LSDRLAGLMDTMDSNSPQAEIIRGLLR 258
LSDRL+ LM TMD+NSPQAEIIR LLR
Sbjct: 61 LSDRLSELMSTMDNNSPQAEIIRSLLR 87
>dbj|BAJ91340.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 85
Score = 127 bits (318), Expect = 2e-27
Identities = 67/85 (78%), Positives = 71/85 (83%)
Frame = +1
Query: 4 MSGRGRRITDEEINELISKLQALLPAESRRRNAGRMSASKLLKETCSYIKSLHREVDGLS 183
MS R RITDEEINELISKLQALLP SRRR+A R SASKLLKETC YIKSLH+EVD LS
Sbjct: 1 MSSRRGRITDEEINELISKLQALLPESSRRRSASRSSASKLLKETCGYIKSLHQEVDDLS 60
Query: 184 DRLAGLMDTMDSNSPQAEIIRGLLR 258
DRL+ LM T+D SPQAEIIR LLR
Sbjct: 61 DRLSELMSTLDETSPQAEIIRSLLR 85
>ref|XP_003558707.1| PREDICTED: transcription factor bHLH135-like [Brachypodium
distachyon]
Length = 85
Score = 125 bits (314), Expect = 6e-27
Identities = 66/85 (77%), Positives = 71/85 (83%)
Frame = +1
Query: 4 MSGRGRRITDEEINELISKLQALLPAESRRRNAGRMSASKLLKETCSYIKSLHREVDGLS 183
MS R RITDEEI ELISKLQALLP SRRR A R SASKLLKETCSYIK+LH+EVD LS
Sbjct: 1 MSSRRGRITDEEITELISKLQALLPESSRRRTASRSSASKLLKETCSYIKNLHQEVDDLS 60
Query: 184 DRLAGLMDTMDSNSPQAEIIRGLLR 258
+RL+ LM T+D NSPQAEIIR LLR
Sbjct: 61 ERLSELMSTLDDNSPQAEIIRSLLR 85
>gb|EMT13985.1| hypothetical protein F775_15902 [Aegilops tauschii]
Length = 85
Score = 125 bits (313), Expect = 7e-27
Identities = 65/85 (76%), Positives = 71/85 (83%)
Frame = +1
Query: 4 MSGRGRRITDEEINELISKLQALLPAESRRRNAGRMSASKLLKETCSYIKSLHREVDGLS 183
MS R RITDEEINELISK+QA+LP SRRR+A R SASKLLKETC YIKSLH+EVD LS
Sbjct: 1 MSSRRGRITDEEINELISKIQAVLPESSRRRSASRSSASKLLKETCGYIKSLHQEVDDLS 60
Query: 184 DRLAGLMDTMDSNSPQAEIIRGLLR 258
DRL+ LM T+D SPQAEIIR LLR
Sbjct: 61 DRLSELMSTLDETSPQAEIIRSLLR 85
>ref|XP_003564054.1| PREDICTED: transcription factor bHLH135-like [Brachypodium
distachyon]
Length = 90
Score = 120 bits (300), Expect = 2e-25
Identities = 61/84 (72%), Positives = 70/84 (83%)
Frame = +1
Query: 7 SGRGRRITDEEINELISKLQALLPAESRRRNAGRMSASKLLKETCSYIKSLHREVDGLSD 186
S RG +++EEINELISKLQ+LLPA +RRR + + S +KLLKETCSYIKSLHREVD LSD
Sbjct: 7 SSRGNSVSEEEINELISKLQSLLPASARRRGSSQASTTKLLKETCSYIKSLHREVDDLSD 66
Query: 187 RLAGLMDTMDSNSPQAEIIRGLLR 258
RL+ LM TMD NSP AEIIR LLR
Sbjct: 67 RLSDLMATMDHNSPGAEIIRSLLR 90
>gb|AAM74282.1|AC083943_22 Hypothetical protein similar to putative DNA binding proteins
[Oryza sativa Japonica Group] gi|31431968|gb|AAP53674.1|
bHLH family protein, putative, expressed [Oryza sativa
Japonica Group] gi|125531848|gb|EAY78413.1| hypothetical
protein OsI_33502 [Oryza sativa Indica Group]
gi|125574725|gb|EAZ16009.1| hypothetical protein
OsJ_31454 [Oryza sativa Japonica Group]
Length = 88
Score = 117 bits (292), Expect = 2e-24
Identities = 66/88 (75%), Positives = 72/88 (81%), Gaps = 3/88 (3%)
Frame = +1
Query: 4 MSGR--GRRITDEEINELISKLQALLPAESRRRNA-GRMSASKLLKETCSYIKSLHREVD 174
MSGR RITD+EINELISKLQ+LLP SRRR A R A+KLLKE CSYIKSLHREVD
Sbjct: 1 MSGRRASGRITDDEINELISKLQSLLPESSRRRGATSRSPATKLLKEMCSYIKSLHREVD 60
Query: 175 GLSDRLAGLMDTMDSNSPQAEIIRGLLR 258
LS+RL+ LM TMDSNSPQA+IIR LLR
Sbjct: 61 DLSERLSELMATMDSNSPQADIIRSLLR 88
>ref|XP_004953911.1| PREDICTED: transcription factor bHLH135-like [Setaria italica]
Length = 88
Score = 115 bits (288), Expect = 6e-24
Identities = 63/85 (74%), Positives = 72/85 (84%)
Frame = +1
Query: 7 SGRGRRITDEEINELISKLQALLPAESRRRNAGRMSASKLLKETCSYIKSLHREVDGLSD 186
S RG I+++EINELISKLQALLP+ SRRR +G+ S +KLLKETCSYIKSLHREVD LSD
Sbjct: 6 SSRGN-ISEDEINELISKLQALLPS-SRRRGSGQASTTKLLKETCSYIKSLHREVDDLSD 63
Query: 187 RLAGLMDTMDSNSPQAEIIRGLLRS 261
RL+ LM TMD NSP AEIIR +LRS
Sbjct: 64 RLSDLMSTMDHNSPGAEIIRSILRS 88
>ref|XP_002452552.1| hypothetical protein SORBIDRAFT_04g027930 [Sorghum bicolor]
gi|241932383|gb|EES05528.1| hypothetical protein
SORBIDRAFT_04g027930 [Sorghum bicolor]
Length = 90
Score = 115 bits (288), Expect = 6e-24
Identities = 63/85 (74%), Positives = 72/85 (84%)
Frame = +1
Query: 7 SGRGRRITDEEINELISKLQALLPAESRRRNAGRMSASKLLKETCSYIKSLHREVDGLSD 186
S RG I+++EINELISKLQALLP+ SRRR +G+ S +KLLKETCSYIKSLHREVD LSD
Sbjct: 8 SSRGN-ISEDEINELISKLQALLPS-SRRRGSGQASTTKLLKETCSYIKSLHREVDDLSD 65
Query: 187 RLAGLMDTMDSNSPQAEIIRGLLRS 261
RL+ LM TMD NSP AEIIR +LRS
Sbjct: 66 RLSDLMSTMDHNSPGAEIIRSILRS 90
>ref|XP_004983139.1| PREDICTED: transcription factor bHLH135-like [Setaria italica]
Length = 88
Score = 115 bits (287), Expect = 8e-24
Identities = 61/87 (70%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
Frame = +1
Query: 4 MSG-RGRRITDEEINELISKLQALLPAESRRRNAGRMSASKLLKETCSYIKSLHREVDGL 180
MSG R RI D+EINELISKLQ++LP SRR AGR SASKLL+ETC YI+ LHREVD L
Sbjct: 1 MSGHRAGRINDDEINELISKLQSVLPESSRRGAAGRSSASKLLQETCQYIRRLHREVDDL 60
Query: 181 SDRLAGLMDTMDSNSPQAEIIRGLLRS 261
++RL+ LM+TMD +SPQA+IIR LLRS
Sbjct: 61 NNRLSELMETMDGDSPQADIIRSLLRS 87
>ref|NP_001152510.1| DNA binding protein [Zea mays] gi|195657019|gb|ACG47977.1| DNA
binding protein [Zea mays] gi|413938887|gb|AFW73438.1|
hypothetical protein ZEAMMB73_736000 [Zea mays]
Length = 89
Score = 114 bits (286), Expect = 1e-23
Identities = 63/85 (74%), Positives = 72/85 (84%)
Frame = +1
Query: 7 SGRGRRITDEEINELISKLQALLPAESRRRNAGRMSASKLLKETCSYIKSLHREVDGLSD 186
S RG I+++EINELISKLQALLP+ SRRR +G+ S +KLLKETCSYIKSLHREVD LSD
Sbjct: 7 SSRGN-ISEDEINELISKLQALLPS-SRRRGSGQASTTKLLKETCSYIKSLHREVDDLSD 64
Query: 187 RLAGLMDTMDSNSPQAEIIRGLLRS 261
RL+ LM TMD NSP AEIIR +LRS
Sbjct: 65 RLSDLMATMDHNSPGAEIIRSILRS 89
>ref|XP_006661756.1| PREDICTED: transcription factor bHLH135-like [Oryza brachyantha]
Length = 89
Score = 113 bits (283), Expect = 2e-23
Identities = 67/89 (75%), Positives = 74/89 (83%), Gaps = 4/89 (4%)
Frame = +1
Query: 4 MSGR--GRRITDEEINELISKLQALLPAESRRRNA-GRMS-ASKLLKETCSYIKSLHREV 171
MSGR RITD+EI ELISKLQ+LLP SRRR A GR S A+KLLKETCSYI+SLHREV
Sbjct: 1 MSGRRASGRITDDEITELISKLQSLLPDSSRRRGATGRPSPAAKLLKETCSYIQSLHREV 60
Query: 172 DGLSDRLAGLMDTMDSNSPQAEIIRGLLR 258
D LS+RL+ LM TMDSNSPQA+IIR LLR
Sbjct: 61 DDLSERLSELMATMDSNSPQADIIRTLLR 89
>ref|XP_003570648.1| PREDICTED: transcription factor bHLH135-like [Brachypodium
distachyon]
Length = 89
Score = 111 bits (278), Expect = 9e-23
Identities = 62/90 (68%), Positives = 71/90 (78%), Gaps = 4/90 (4%)
Frame = +1
Query: 4 MSGRGRR----ITDEEINELISKLQALLPAESRRRNAGRMSASKLLKETCSYIKSLHREV 171
MS R R I++EEINELISKLQ+LLP +RRR + + S +KLLKETCSYIKSLHREV
Sbjct: 1 MSSRSRSSRGAISEEEINELISKLQSLLP-NARRRGSSQASTTKLLKETCSYIKSLHREV 59
Query: 172 DGLSDRLAGLMDTMDSNSPQAEIIRGLLRS 261
D LSDRL+ LM TMD NSP AEIIR +LRS
Sbjct: 60 DDLSDRLSDLMSTMDHNSPGAEIIRSILRS 89
>ref|NP_001152393.1| DNA binding protein [Zea mays] gi|195655845|gb|ACG47390.1| DNA
binding protein [Zea mays] gi|223944863|gb|ACN26515.1|
unknown [Zea mays] gi|413924559|gb|AFW64491.1| putative
HLH DNA-binding domain superfamily protein [Zea mays]
Length = 90
Score = 111 bits (278), Expect = 9e-23
Identities = 55/79 (69%), Positives = 67/79 (84%)
Frame = +1
Query: 25 ITDEEINELISKLQALLPAESRRRNAGRMSASKLLKETCSYIKSLHREVDGLSDRLAGLM 204
I+++E+NEL+SKLQALLP+ RRR +G+ S +KLLKETCSYIKSL REVD LSDRL+ L+
Sbjct: 12 ISEDEMNELVSKLQALLPSSRRRRGSGQASTAKLLKETCSYIKSLQREVDDLSDRLSDLL 71
Query: 205 DTMDSNSPQAEIIRGLLRS 261
TMD NSP AEIIR +LRS
Sbjct: 72 STMDHNSPAAEIIRSILRS 90
>dbj|BAK06826.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 88
Score = 110 bits (276), Expect = 1e-22
Identities = 62/85 (72%), Positives = 69/85 (81%)
Frame = +1
Query: 7 SGRGRRITDEEINELISKLQALLPAESRRRNAGRMSASKLLKETCSYIKSLHREVDGLSD 186
S RG I+DEEINELISKLQ+LLP SRRR + + S +KLLKETCSYIKSLHREVD LSD
Sbjct: 6 SSRGA-ISDEEINELISKLQSLLP-NSRRRGSSQASTTKLLKETCSYIKSLHREVDDLSD 63
Query: 187 RLAGLMDTMDSNSPQAEIIRGLLRS 261
RL+ LM TMD NS AEIIR +LRS
Sbjct: 64 RLSDLMSTMDHNSAGAEIIRSILRS 88
>gb|EMT32161.1| Transcription factor bHLH135 [Aegilops tauschii]
Length = 88
Score = 110 bits (275), Expect = 2e-22
Identities = 60/85 (70%), Positives = 70/85 (82%)
Frame = +1
Query: 7 SGRGRRITDEEINELISKLQALLPAESRRRNAGRMSASKLLKETCSYIKSLHREVDGLSD 186
S RG I+DEE+NEL+SKLQ+LLP SRRR + + S +KLLKETCSYIKSLH EVD LSD
Sbjct: 6 SSRGA-ISDEEVNELMSKLQSLLP-NSRRRGSSQASTTKLLKETCSYIKSLHGEVDDLSD 63
Query: 187 RLAGLMDTMDSNSPQAEIIRGLLRS 261
RL+ LM TMD NS +AEIIRG+LRS
Sbjct: 64 RLSDLMSTMDHNSAEAEIIRGILRS 88
>dbj|BAD16450.1| DNA binding protein-like [Oryza sativa Japonica Group]
gi|125541133|gb|EAY87528.1| hypothetical protein
OsI_08935 [Oryza sativa Indica Group]
gi|125583685|gb|EAZ24616.1| hypothetical protein
OsJ_08379 [Oryza sativa Japonica Group]
Length = 88
Score = 110 bits (275), Expect = 2e-22
Identities = 61/85 (71%), Positives = 70/85 (82%)
Frame = +1
Query: 7 SGRGRRITDEEINELISKLQALLPAESRRRNAGRMSASKLLKETCSYIKSLHREVDGLSD 186
S RG I++EEINELISKLQ+LLP SRRR + + S +KLLKETC+YIKSLHREVD LSD
Sbjct: 6 SSRGS-ISEEEINELISKLQSLLP-NSRRRGSSQASTTKLLKETCNYIKSLHREVDDLSD 63
Query: 187 RLAGLMDTMDSNSPQAEIIRGLLRS 261
RL+ LM TMD NSP AEIIR +LRS
Sbjct: 64 RLSDLMATMDHNSPGAEIIRSILRS 88