BLASTX nr result

ID: Zingiber25_contig00040876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00040876
         (486 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ24585.1| hypothetical protein PRUPE_ppa004614mg [Prunus pe...    59   7e-07
ref|XP_002265858.1| PREDICTED: DUF246 domain-containing protein ...    56   4e-06

>gb|EMJ24585.1| hypothetical protein PRUPE_ppa004614mg [Prunus persica]
          Length = 500

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 38/100 (38%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
 Frame = +2

Query: 197 SEGTIAVEVSGLPQARAAMTARVRRQAWFVTACGCVLLWTCLIQLLAYGRLWQ----SWN 364
           SEG I V    LP   A + AR R Q WF+  C  + LWTCL+QL+A G LW     S  
Sbjct: 5   SEGGIQVRCDKLP---APVIARTRLQVWFIRVCSSLFLWTCLVQLVAVGELWHPHLLSNI 61

Query: 365 PARFFLVLRDDVAGVGXXXXXXXXXXXXXGLQSRNYTSNG 484
             R   + +D +  V               L +RNYTSNG
Sbjct: 62  TNRISTITQDPLPAVPSPPPL---------LPARNYTSNG 92


>ref|XP_002265858.1| PREDICTED: DUF246 domain-containing protein At1g04910 [Vitis
           vinifera] gi|296087792|emb|CBI35048.3| unnamed protein
           product [Vitis vinifera]
          Length = 504

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 25/52 (48%), Positives = 32/52 (61%)
 Frame = +2

Query: 197 SEGTIAVEVSGLPQARAAMTARVRRQAWFVTACGCVLLWTCLIQLLAYGRLW 352
           SEG++ V    LP   A +  R R Q WF+  C  +LLWTCL+QL+A G LW
Sbjct: 5   SEGSLQVRCDKLP---APVIPRTRLQVWFIRVCSSILLWTCLVQLVAVGELW 53


Top