BLASTX nr result
ID: Zingiber25_contig00040854
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00040854
(425 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ07912.1| hypothetical protein PRUPE_ppa024205mg [Prunus pe... 134 1e-29
ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containi... 132 6e-29
gb|EXC35478.1| hypothetical protein L484_026785 [Morus notabilis] 131 8e-29
ref|XP_004289518.1| PREDICTED: pentatricopeptide repeat-containi... 130 1e-28
gb|EMJ08058.1| hypothetical protein PRUPE_ppa027172mg [Prunus pe... 130 2e-28
gb|ESW30343.1| hypothetical protein PHAVU_002G145200g [Phaseolus... 130 2e-28
ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago t... 129 3e-28
ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containi... 128 9e-28
ref|XP_004512569.1| PREDICTED: pentatricopeptide repeat-containi... 127 1e-27
ref|XP_002512769.1| pentatricopeptide repeat-containing protein,... 125 6e-27
emb|CBI40853.3| unnamed protein product [Vitis vinifera] 124 2e-26
ref|XP_003524191.2| PREDICTED: pentatricopeptide repeat-containi... 122 5e-26
gb|EMJ18239.1| hypothetical protein PRUPE_ppa001611mg [Prunus pe... 122 5e-26
ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containi... 122 5e-26
gb|ESW31396.1| hypothetical protein PHAVU_002G235300g [Phaseolus... 122 6e-26
ref|XP_004231236.1| PREDICTED: pentatricopeptide repeat-containi... 122 6e-26
ref|XP_006347856.1| PREDICTED: pentatricopeptide repeat-containi... 121 1e-25
ref|XP_006422178.1| hypothetical protein CICLE_v10006927mg [Citr... 120 1e-25
gb|EPS72112.1| hypothetical protein M569_02645, partial [Genlise... 120 2e-25
emb|CBI21005.3| unnamed protein product [Vitis vinifera] 120 2e-25
>gb|EMJ07912.1| hypothetical protein PRUPE_ppa024205mg [Prunus persica]
Length = 577
Score = 134 bits (337), Expect = 1e-29
Identities = 62/91 (68%), Positives = 76/91 (83%)
Frame = -3
Query: 423 NTKYVLQEMDEVEKERSLYCHSEKLAVAFGVMNSHGKCHKPITIFKNLRVCGDCHSWIKL 244
+T++VLQ+MDE K+RSLY HSEKLA++F ++ S K + I IFKNLRVCGDCHSWIK
Sbjct: 488 DTRFVLQDMDEELKKRSLYYHSEKLAISFALLMSSNK-NTIIRIFKNLRVCGDCHSWIKF 546
Query: 243 VSIVVGKQIIARDSKRFHHFKDGLCSCNDYW 151
V+ V G++IIARD+KRFHHFKDGLCSC DYW
Sbjct: 547 VTKVSGREIIARDAKRFHHFKDGLCSCGDYW 577
>ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like isoform X1 [Glycine max]
Length = 676
Score = 132 bits (331), Expect = 6e-29
Identities = 60/91 (65%), Positives = 73/91 (80%)
Frame = -3
Query: 423 NTKYVLQEMDEVEKERSLYCHSEKLAVAFGVMNSHGKCHKPITIFKNLRVCGDCHSWIKL 244
NT++VLQ++DE +K SLY HSEKLA+A+ + + G+ I IFKNLRVCGDCHSWIK
Sbjct: 587 NTRFVLQDLDEEKKISSLYYHSEKLAIAYALWKTIGRT-TTIRIFKNLRVCGDCHSWIKF 645
Query: 243 VSIVVGKQIIARDSKRFHHFKDGLCSCNDYW 151
VS++ G+ IIARDSKRFHHFK GLCSC DYW
Sbjct: 646 VSLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
>gb|EXC35478.1| hypothetical protein L484_026785 [Morus notabilis]
Length = 728
Score = 131 bits (330), Expect = 8e-29
Identities = 61/91 (67%), Positives = 72/91 (79%)
Frame = -3
Query: 423 NTKYVLQEMDEVEKERSLYCHSEKLAVAFGVMNSHGKCHKPITIFKNLRVCGDCHSWIKL 244
+T++VLQ +DE K RSLY HSEKLA AF + + + I IFKNLRVCGDCHSWIKL
Sbjct: 639 DTRFVLQNLDEESKRRSLYYHSEKLATAFALWTTRNR-GTSIRIFKNLRVCGDCHSWIKL 697
Query: 243 VSIVVGKQIIARDSKRFHHFKDGLCSCNDYW 151
VS VVG++IIARD+KRFHHFK+G CSC DYW
Sbjct: 698 VSNVVGREIIARDAKRFHHFKEGSCSCGDYW 728
>ref|XP_004289518.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Fragaria vesca subsp. vesca]
Length = 719
Score = 130 bits (328), Expect = 1e-28
Identities = 59/91 (64%), Positives = 75/91 (82%)
Frame = -3
Query: 423 NTKYVLQEMDEVEKERSLYCHSEKLAVAFGVMNSHGKCHKPITIFKNLRVCGDCHSWIKL 244
+T++VLQ++DE +K+RSLY HSEKLA+AF ++ S K + I IFKNL+VCGDCHSWIK
Sbjct: 630 DTRFVLQDLDEDKKKRSLYYHSEKLAIAFALLRSSKK-NTIIRIFKNLKVCGDCHSWIKF 688
Query: 243 VSIVVGKQIIARDSKRFHHFKDGLCSCNDYW 151
V+ V G++IIARD+KRFHHFKD CSC DYW
Sbjct: 689 VTKVTGREIIARDAKRFHHFKDSCCSCGDYW 719
>gb|EMJ08058.1| hypothetical protein PRUPE_ppa027172mg [Prunus persica]
Length = 650
Score = 130 bits (327), Expect = 2e-28
Identities = 60/91 (65%), Positives = 75/91 (82%)
Frame = -3
Query: 423 NTKYVLQEMDEVEKERSLYCHSEKLAVAFGVMNSHGKCHKPITIFKNLRVCGDCHSWIKL 244
+T++VLQ++DE K+RSLY HSEKLA++F ++ S K + I IFKNLRVCGDCHSWIK
Sbjct: 561 DTRFVLQDLDEELKKRSLYYHSEKLAISFALLVSSNK-NTIIRIFKNLRVCGDCHSWIKF 619
Query: 243 VSIVVGKQIIARDSKRFHHFKDGLCSCNDYW 151
V+ V ++IIARD+KRFHHFKDGLCSC DYW
Sbjct: 620 VTKVSSREIIARDAKRFHHFKDGLCSCGDYW 650
>gb|ESW30343.1| hypothetical protein PHAVU_002G145200g [Phaseolus vulgaris]
Length = 676
Score = 130 bits (326), Expect = 2e-28
Identities = 59/91 (64%), Positives = 73/91 (80%)
Frame = -3
Query: 423 NTKYVLQEMDEVEKERSLYCHSEKLAVAFGVMNSHGKCHKPITIFKNLRVCGDCHSWIKL 244
+T++VLQ++DE +K SLY HSEKLA+AF + + G+ I IFKNLRVCGDCHSWIK
Sbjct: 587 DTRFVLQDLDEEKKMSSLYYHSEKLAIAFALWKTIGRS-TTIRIFKNLRVCGDCHSWIKF 645
Query: 243 VSIVVGKQIIARDSKRFHHFKDGLCSCNDYW 151
VS++ G+ IIARD+KRFHHFK GLCSC DYW
Sbjct: 646 VSLLTGRYIIARDAKRFHHFKGGLCSCKDYW 676
>ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514334|gb|AES95957.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 676
Score = 129 bits (325), Expect = 3e-28
Identities = 58/91 (63%), Positives = 74/91 (81%)
Frame = -3
Query: 423 NTKYVLQEMDEVEKERSLYCHSEKLAVAFGVMNSHGKCHKPITIFKNLRVCGDCHSWIKL 244
+TK+VLQ+++E +K +LY HSEKLA+AF + + GK + I IFKNLRVCGDCHSWIK
Sbjct: 587 DTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGK-NTAIRIFKNLRVCGDCHSWIKF 645
Query: 243 VSIVVGKQIIARDSKRFHHFKDGLCSCNDYW 151
VS++ G+ IIARD+KRFHHFK G+CSC DYW
Sbjct: 646 VSLLTGRDIIARDAKRFHHFKGGICSCKDYW 676
>ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 128 bits (321), Expect = 9e-28
Identities = 59/91 (64%), Positives = 74/91 (81%)
Frame = -3
Query: 423 NTKYVLQEMDEVEKERSLYCHSEKLAVAFGVMNSHGKCHKPITIFKNLRVCGDCHSWIKL 244
+T++VLQ++DE +K RSLY HSEKLAVAF + S+ K + I I KNLRVCGDCH+W+K
Sbjct: 662 DTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYK-NTTIRILKNLRVCGDCHTWMKF 720
Query: 243 VSIVVGKQIIARDSKRFHHFKDGLCSCNDYW 151
VS +VG+ IIARD KRFHHF++GLCSC DYW
Sbjct: 721 VSKIVGRDIIARDVKRFHHFRNGLCSCGDYW 751
>ref|XP_004512569.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Cicer arietinum]
Length = 677
Score = 127 bits (320), Expect = 1e-27
Identities = 58/91 (63%), Positives = 70/91 (76%)
Frame = -3
Query: 423 NTKYVLQEMDEVEKERSLYCHSEKLAVAFGVMNSHGKCHKPITIFKNLRVCGDCHSWIKL 244
+TK+VLQ ++E +K SLY HSEKLA+AF + S G+ I IFKNLRVCGDCH WIK
Sbjct: 588 DTKFVLQNLEEEKKISSLYYHSEKLAIAFALWKSSGRT-STIRIFKNLRVCGDCHEWIKF 646
Query: 243 VSIVVGKQIIARDSKRFHHFKDGLCSCNDYW 151
VS+ G+ IIARD+KRFHHFK G+CSC DYW
Sbjct: 647 VSLQTGRDIIARDAKRFHHFKGGMCSCKDYW 677
>ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223547780|gb|EEF49272.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 684
Score = 125 bits (314), Expect = 6e-27
Identities = 54/91 (59%), Positives = 73/91 (80%)
Frame = -3
Query: 423 NTKYVLQEMDEVEKERSLYCHSEKLAVAFGVMNSHGKCHKPITIFKNLRVCGDCHSWIKL 244
NT +VLQ +D+ ++E +L HSE+LAVAFG++NS GK + +FKNLR+CGDCH+ IKL
Sbjct: 596 NTDFVLQNVDQEQREETLCSHSERLAVAFGILNSSGKT--TVRVFKNLRICGDCHNAIKL 653
Query: 243 VSIVVGKQIIARDSKRFHHFKDGLCSCNDYW 151
++ +VG QII RDS RFHHF+DG C+CND+W
Sbjct: 654 IAKIVGMQIIVRDSLRFHHFRDGYCTCNDFW 684
>emb|CBI40853.3| unnamed protein product [Vitis vinifera]
Length = 749
Score = 124 bits (310), Expect = 2e-26
Identities = 58/90 (64%), Positives = 73/90 (81%)
Frame = -3
Query: 423 NTKYVLQEMDEVEKERSLYCHSEKLAVAFGVMNSHGKCHKPITIFKNLRVCGDCHSWIKL 244
+T++VLQ++DE +K RSLY HSEKLAVAF + S+ K + I I KNLRVCGDCH+W+K
Sbjct: 631 DTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYK-NTTIRILKNLRVCGDCHTWMKF 689
Query: 243 VSIVVGKQIIARDSKRFHHFKDGLCSCNDY 154
VS +VG+ IIARD KRFHHF++GLCSC DY
Sbjct: 690 VSKIVGRDIIARDVKRFHHFRNGLCSCGDY 719
>ref|XP_003524191.2| PREDICTED: pentatricopeptide repeat-containing protein At4g32450,
mitochondrial-like [Glycine max]
Length = 665
Score = 122 bits (306), Expect = 5e-26
Identities = 52/90 (57%), Positives = 73/90 (81%)
Frame = -3
Query: 420 TKYVLQEMDEVEKERSLYCHSEKLAVAFGVMNSHGKCHKPITIFKNLRVCGDCHSWIKLV 241
TK+VL ++D+ KE +L HSE+LAVA+G++NS + P+ + KNLRVCGDCH+ +K++
Sbjct: 578 TKFVLHDIDQEGKEEALLAHSERLAVAYGLLNSPARA--PMRVIKNLRVCGDCHTALKII 635
Query: 240 SIVVGKQIIARDSKRFHHFKDGLCSCNDYW 151
S +VG+++I RD+KRFHHFKDGLCSC DYW
Sbjct: 636 SKLVGRELIIRDAKRFHHFKDGLCSCRDYW 665
>gb|EMJ18239.1| hypothetical protein PRUPE_ppa001611mg [Prunus persica]
Length = 793
Score = 122 bits (306), Expect = 5e-26
Identities = 54/91 (59%), Positives = 71/91 (78%)
Frame = -3
Query: 423 NTKYVLQEMDEVEKERSLYCHSEKLAVAFGVMNSHGKCHKPITIFKNLRVCGDCHSWIKL 244
NT +VL +++E +KE L+ HSEK+AVAFG++++ KPI +FKNLRVCGDCH+ IK
Sbjct: 705 NTDFVLHDVEEEQKEYYLFQHSEKIAVAFGLISTSKS--KPIRVFKNLRVCGDCHTAIKY 762
Query: 243 VSIVVGKQIIARDSKRFHHFKDGLCSCNDYW 151
+S G++I+ RDS RFHHFKDG CSCNDYW
Sbjct: 763 ISKATGREIVVRDSNRFHHFKDGTCSCNDYW 793
>ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera] gi|297736133|emb|CBI24171.3| unnamed
protein product [Vitis vinifera]
Length = 687
Score = 122 bits (306), Expect = 5e-26
Identities = 56/91 (61%), Positives = 72/91 (79%)
Frame = -3
Query: 423 NTKYVLQEMDEVEKERSLYCHSEKLAVAFGVMNSHGKCHKPITIFKNLRVCGDCHSWIKL 244
NT +VLQ++D+ EKE L HSEKLAVAFGV+N +G+ I +FKNLR+CGDCH+ IK
Sbjct: 599 NTDFVLQDVDQEEKEEVLCNHSEKLAVAFGVLNLNGE--SSIRVFKNLRICGDCHNAIKF 656
Query: 243 VSIVVGKQIIARDSKRFHHFKDGLCSCNDYW 151
++ +VG +II RDS RFHHF+DGLCSC D+W
Sbjct: 657 MAKIVGVKIIVRDSLRFHHFRDGLCSCQDFW 687
>gb|ESW31396.1| hypothetical protein PHAVU_002G235300g [Phaseolus vulgaris]
Length = 679
Score = 122 bits (305), Expect = 6e-26
Identities = 52/90 (57%), Positives = 73/90 (81%)
Frame = -3
Query: 420 TKYVLQEMDEVEKERSLYCHSEKLAVAFGVMNSHGKCHKPITIFKNLRVCGDCHSWIKLV 241
TK+VL ++D+ KE +L HSE+LAVA+G+++S + PI + KNLRVCGDCH+ +K++
Sbjct: 592 TKFVLHDIDQEGKEEALLAHSERLAVAYGLLSSSAR--SPIRVIKNLRVCGDCHTALKII 649
Query: 240 SIVVGKQIIARDSKRFHHFKDGLCSCNDYW 151
S +VG+++I RD+KRFHHFKDGLCSC DYW
Sbjct: 650 SKLVGRELIIRDAKRFHHFKDGLCSCRDYW 679
>ref|XP_004231236.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Solanum lycopersicum]
Length = 844
Score = 122 bits (305), Expect = 6e-26
Identities = 54/91 (59%), Positives = 73/91 (80%)
Frame = -3
Query: 423 NTKYVLQEMDEVEKERSLYCHSEKLAVAFGVMNSHGKCHKPITIFKNLRVCGDCHSWIKL 244
NT VL E+++ +KE+ L+ HSEK+A+AFG++++ + KPI IFKNLRVCGDCH+ +K
Sbjct: 756 NTDLVLHEVEDEQKEQYLFQHSEKIALAFGLISTSKQ--KPIRIFKNLRVCGDCHNAMKF 813
Query: 243 VSIVVGKQIIARDSKRFHHFKDGLCSCNDYW 151
+S+ G++II RDS RFHH KDGLCSCNDYW
Sbjct: 814 ISVAEGREIIIRDSNRFHHIKDGLCSCNDYW 844
>ref|XP_006347856.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Solanum tuberosum]
Length = 849
Score = 121 bits (303), Expect = 1e-25
Identities = 54/91 (59%), Positives = 73/91 (80%)
Frame = -3
Query: 423 NTKYVLQEMDEVEKERSLYCHSEKLAVAFGVMNSHGKCHKPITIFKNLRVCGDCHSWIKL 244
NT VL E+++ +KE+ L+ HSEK+A+AFG++++ + KPI IFKNLRVCGDCH+ +K
Sbjct: 761 NTDLVLHEVEDEQKEQYLFQHSEKIALAFGLISTCKQ--KPIRIFKNLRVCGDCHNAMKF 818
Query: 243 VSIVVGKQIIARDSKRFHHFKDGLCSCNDYW 151
+S+ G++II RDS RFHH KDGLCSCNDYW
Sbjct: 819 ISVAEGREIIIRDSNRFHHIKDGLCSCNDYW 849
>ref|XP_006422178.1| hypothetical protein CICLE_v10006927mg [Citrus clementina]
gi|568874825|ref|XP_006490514.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Citrus sinensis]
gi|557524051|gb|ESR35418.1| hypothetical protein
CICLE_v10006927mg [Citrus clementina]
Length = 861
Score = 120 bits (302), Expect = 1e-25
Identities = 53/91 (58%), Positives = 72/91 (79%)
Frame = -3
Query: 423 NTKYVLQEMDEVEKERSLYCHSEKLAVAFGVMNSHGKCHKPITIFKNLRVCGDCHSWIKL 244
+T +VL E++E +K + L+ HSEK+AVAFG++++ KPI +FKNLRVCGDCH+ IK
Sbjct: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKS--KPIRVFKNLRVCGDCHTAIKY 830
Query: 243 VSIVVGKQIIARDSKRFHHFKDGLCSCNDYW 151
+S+V G++I+ RDS RFHH KDG CSCNDYW
Sbjct: 831 ISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
>gb|EPS72112.1| hypothetical protein M569_02645, partial [Genlisea aurea]
Length = 419
Score = 120 bits (301), Expect = 2e-25
Identities = 50/91 (54%), Positives = 75/91 (82%)
Frame = -3
Query: 423 NTKYVLQEMDEVEKERSLYCHSEKLAVAFGVMNSHGKCHKPITIFKNLRVCGDCHSWIKL 244
+T+YVL ++D+ KE++L HSE+LA+A+G++++ + P+ I KNLR+CGDCH+ IK+
Sbjct: 331 DTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPART--PLRIIKNLRICGDCHNAIKI 388
Query: 243 VSIVVGKQIIARDSKRFHHFKDGLCSCNDYW 151
+S +VG+++I RD+KRFHHFKDG CSCNDYW
Sbjct: 389 MSRIVGRELIVRDNKRFHHFKDGKCSCNDYW 419
>emb|CBI21005.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 120 bits (301), Expect = 2e-25
Identities = 51/90 (56%), Positives = 73/90 (81%)
Frame = -3
Query: 420 TKYVLQEMDEVEKERSLYCHSEKLAVAFGVMNSHGKCHKPITIFKNLRVCGDCHSWIKLV 241
T++VL ++D+ KE +L HSE+LAVA+G+++S + PI + KNLRVCGDCH+ +K++
Sbjct: 589 TRFVLHDIDQEGKEEALLAHSERLAVAYGLLSSPAR--SPIRVIKNLRVCGDCHTALKII 646
Query: 240 SIVVGKQIIARDSKRFHHFKDGLCSCNDYW 151
S +VG+++I RD+KRFHHFKDGLCSC DYW
Sbjct: 647 SKLVGRELIIRDAKRFHHFKDGLCSCRDYW 676