BLASTX nr result
ID: Zingiber25_contig00040851
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00040851
(296 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002531123.1| chromodomain helicase DNA binding protein, p... 91 2e-16
gb|EMJ15547.1| hypothetical protein PRUPE_ppa000116mg [Prunus pe... 89 8e-16
ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding... 89 8e-16
emb|CAN76895.1| hypothetical protein VITISV_009954 [Vitis vinifera] 89 8e-16
ref|XP_002300156.2| hypothetical protein POPTR_0001s26030g [Popu... 83 3e-14
gb|EOY32820.1| Chromatin remodeling complex subunit isoform 2 [T... 83 3e-14
gb|EOY32819.1| Chromatin remodeling complex subunit isoform 1 [T... 83 3e-14
gb|EXB55506.1| Chromodomain-helicase-DNA-binding protein 1 [Moru... 81 2e-13
ref|XP_004291747.1| PREDICTED: chromodomain-helicase-DNA-binding... 80 3e-13
ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago trunca... 77 2e-12
ref|XP_006470732.1| PREDICTED: chromodomain-helicase-DNA-binding... 77 3e-12
ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [M... 76 4e-12
ref|XP_004491263.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain... 76 5e-12
ref|XP_006446246.1| hypothetical protein CICLE_v100140192mg, par... 75 7e-12
gb|ESW13477.1| hypothetical protein PHAVU_008G199800g [Phaseolus... 75 1e-11
ref|XP_002313369.1| hypothetical protein POPTR_0009s05250g [Popu... 75 1e-11
ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding... 73 5e-11
ref|XP_006575632.1| PREDICTED: chromodomain-helicase-DNA-binding... 72 8e-11
ref|XP_004252878.1| PREDICTED: chromodomain-helicase-DNA-binding... 72 1e-10
ref|XP_003562521.1| PREDICTED: chromodomain-helicase-DNA-binding... 71 2e-10
>ref|XP_002531123.1| chromodomain helicase DNA binding protein, putative [Ricinus
communis] gi|223529287|gb|EEF31257.1| chromodomain
helicase DNA binding protein, putative [Ricinus
communis]
Length = 1718
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/97 (46%), Positives = 59/97 (60%)
Frame = +1
Query: 4 NNIGNEESGRNSSEDSHEQRHRRLSQRGNVDIPADEMLSDDYYEQDGEEQSDSVHGSGQN 183
+N+ + G SED Q+ Q+G D+PADEMLSD+YYEQDGE+QSDS+H G
Sbjct: 127 DNMSDGRDGTLESEDEEGQKDLNKGQKGQSDVPADEMLSDEYYEQDGEDQSDSIHYRGFG 186
Query: 184 HTNISGSRFPLKPVSVNKKTAKKSRVIKDEEYEDDED 294
H+ SR LKP V ++ SR I + E EDDE+
Sbjct: 187 HSVGLNSRLHLKPAPVKNNFSRSSRAIPNPEDEDDEN 223
>gb|EMJ15547.1| hypothetical protein PRUPE_ppa000116mg [Prunus persica]
Length = 1761
Score = 88.6 bits (218), Expect = 8e-16
Identities = 48/104 (46%), Positives = 68/104 (65%), Gaps = 6/104 (5%)
Frame = +1
Query: 1 RNNIGNEESGRNSSED-----SHEQRHRRLSQRGNVDIPADEMLSDDYYEQDGEEQSDSV 165
RN +G+E++ + ED +++ QRG+ DIPADEMLSD+YYEQDGEEQSDS+
Sbjct: 127 RNVVGSEDNSSDVREDRIDFEDNDRPKVSKGQRGHSDIPADEMLSDEYYEQDGEEQSDSM 186
Query: 166 HGSGQNHTNISGSRFPLKPVSVNKKTAKKSRVIKD-EEYEDDED 294
H G +H+ S SR KP +V+ + SRV+ D E+Y+D +D
Sbjct: 187 HYRGFHHSVGSNSRPQSKPAAVSNHALRTSRVLNDNEDYDDGDD 230
>ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Vitis
vinifera]
Length = 1764
Score = 88.6 bits (218), Expect = 8e-16
Identities = 46/93 (49%), Positives = 62/93 (66%)
Frame = +1
Query: 16 NEESGRNSSEDSHEQRHRRLSQRGNVDIPADEMLSDDYYEQDGEEQSDSVHGSGQNHTNI 195
NEE+ ++S D E Q+G D+PADEM SDDYYEQDGE+QSDS+H G NH+++
Sbjct: 127 NEEALEDNSSDGREVDK---VQKGQNDVPADEMSSDDYYEQDGEDQSDSLHYRGLNHSSV 183
Query: 196 SGSRFPLKPVSVNKKTAKKSRVIKDEEYEDDED 294
S+ +PV+VN A+ S+ D EY+DDED
Sbjct: 184 LNSQPQSRPVAVN--MARNSKASNDNEYDDDED 214
>emb|CAN76895.1| hypothetical protein VITISV_009954 [Vitis vinifera]
Length = 626
Score = 88.6 bits (218), Expect = 8e-16
Identities = 46/93 (49%), Positives = 62/93 (66%)
Frame = +1
Query: 16 NEESGRNSSEDSHEQRHRRLSQRGNVDIPADEMLSDDYYEQDGEEQSDSVHGSGQNHTNI 195
NEE+ ++S D E Q+G D+PADEM SDDYYEQDGE+QSDS+H G NH+++
Sbjct: 168 NEEALEDNSSDGREVDK---VQKGQNDVPADEMSSDDYYEQDGEDQSDSLHYRGLNHSSV 224
Query: 196 SGSRFPLKPVSVNKKTAKKSRVIKDEEYEDDED 294
S+ +PV+VN A+ S+ D EY+DDED
Sbjct: 225 LNSQPQSRPVAVN--MARNSKASNDNEYDDDED 255
>ref|XP_002300156.2| hypothetical protein POPTR_0001s26030g [Populus trichocarpa]
gi|550348207|gb|EEE84961.2| hypothetical protein
POPTR_0001s26030g [Populus trichocarpa]
Length = 1767
Score = 83.2 bits (204), Expect = 3e-14
Identities = 41/97 (42%), Positives = 58/97 (59%)
Frame = +1
Query: 4 NNIGNEESGRNSSEDSHEQRHRRLSQRGNVDIPADEMLSDDYYEQDGEEQSDSVHGSGQN 183
+N+ N R SED Q+ +G+ D+PADEMLSD+YYEQDGE+QSDSVH G +
Sbjct: 126 DNVSNGRDDRLDSEDEEGQKEAGKGGKGHSDVPADEMLSDEYYEQDGEDQSDSVHYRGFS 185
Query: 184 HTNISGSRFPLKPVSVNKKTAKKSRVIKDEEYEDDED 294
+ SR KPV + +++SR + + E DD +
Sbjct: 186 QSVDLSSRLQKKPVPIKNNVSRRSRGLHNSEGYDDNN 222
>gb|EOY32820.1| Chromatin remodeling complex subunit isoform 2 [Theobroma cacao]
Length = 1810
Score = 83.2 bits (204), Expect = 3e-14
Identities = 40/96 (41%), Positives = 61/96 (63%)
Frame = +1
Query: 7 NIGNEESGRNSSEDSHEQRHRRLSQRGNVDIPADEMLSDDYYEQDGEEQSDSVHGSGQNH 186
N ++ R S+D Q+ +QRG+ D+PADEMLSD+YYEQDGEEQSD++H G ++
Sbjct: 131 NSSDDRDDRLESDDDEAQKEVGKAQRGHSDVPADEMLSDEYYEQDGEEQSDTMHYRGFSN 190
Query: 187 TNISGSRFPLKPVSVNKKTAKKSRVIKDEEYEDDED 294
+ +R KPV V+ ++ SR + Y+D++D
Sbjct: 191 SVGLNTRPQSKPVCVSTTVSRGSRALNTRNYDDEDD 226
>gb|EOY32819.1| Chromatin remodeling complex subunit isoform 1 [Theobroma cacao]
gi|508785565|gb|EOY32821.1| Chromatin remodeling complex
subunit isoform 1 [Theobroma cacao]
Length = 1768
Score = 83.2 bits (204), Expect = 3e-14
Identities = 40/96 (41%), Positives = 61/96 (63%)
Frame = +1
Query: 7 NIGNEESGRNSSEDSHEQRHRRLSQRGNVDIPADEMLSDDYYEQDGEEQSDSVHGSGQNH 186
N ++ R S+D Q+ +QRG+ D+PADEMLSD+YYEQDGEEQSD++H G ++
Sbjct: 131 NSSDDRDDRLESDDDEAQKEVGKAQRGHSDVPADEMLSDEYYEQDGEEQSDTMHYRGFSN 190
Query: 187 TNISGSRFPLKPVSVNKKTAKKSRVIKDEEYEDDED 294
+ +R KPV V+ ++ SR + Y+D++D
Sbjct: 191 SVGLNTRPQSKPVCVSTTVSRGSRALNTRNYDDEDD 226
>gb|EXB55506.1| Chromodomain-helicase-DNA-binding protein 1 [Morus notabilis]
Length = 1754
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/97 (42%), Positives = 58/97 (59%)
Frame = +1
Query: 4 NNIGNEESGRNSSEDSHEQRHRRLSQRGNVDIPADEMLSDDYYEQDGEEQSDSVHGSGQN 183
+N + R SED ++ Q+G D+ DEMLSD+YYEQDG+EQSDSV+ G +
Sbjct: 81 DNSSDGREQRLDSEDDDGPKYAGKGQQGPSDVATDEMLSDEYYEQDGKEQSDSVNYRGFH 140
Query: 184 HTNISGSRFPLKPVSVNKKTAKKSRVIKDEEYEDDED 294
++ +S SR LKP + NK + SR++ D DD D
Sbjct: 141 NSTVSNSRPQLKPAAFNKNIVRASRIMNDNNNFDDGD 177
>ref|XP_004291747.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
[Fragaria vesca subsp. vesca]
Length = 1746
Score = 80.1 bits (196), Expect = 3e-13
Identities = 47/104 (45%), Positives = 63/104 (60%), Gaps = 6/104 (5%)
Frame = +1
Query: 1 RNNIGNEESGRNSSEDSHEQRHR-----RLSQRGNVDIPADEMLSDDYYEQDGEEQSDSV 165
RN +G+E++ + ED + R QRG+ DIPADEMLSD+YYEQDGEEQSDS+
Sbjct: 127 RNAVGSEDNSSDVREDRLDSEDDAGPKVRKGQRGHSDIPADEMLSDEYYEQDGEEQSDSM 186
Query: 166 HGSGQNHTNISGSRFPLKPVSV-NKKTAKKSRVIKDEEYEDDED 294
H G +H+ S SR KP + N +T++ S + Y D ED
Sbjct: 187 HYRGFHHSVGSTSRLQAKPAPITNHRTSRLSN--NNGNYVDGED 228
>ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago truncatula]
gi|355489210|gb|AES70413.1| DNA-directed RNA polymerase
[Medicago truncatula]
Length = 2083
Score = 77.0 bits (188), Expect = 2e-12
Identities = 41/95 (43%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Frame = +1
Query: 16 NEESGRNS---SEDSHEQRHRRLSQRGNVDIPADEMLSDDYYEQDGEEQSDSVHGSGQNH 186
N GR SED Q+ QRG+ D+PA+EMLSDD Y QDGEEQ +SVH G
Sbjct: 116 NSSEGRGEKLGSEDEDGQKDSGKGQRGDSDVPAEEMLSDDSYGQDGEEQGESVHSRGFRP 175
Query: 187 TNISGSRFPLKPVSVNKKTAKKSRVIKDEEYEDDE 291
+ S S +VN++ +KSR++ D E +DD+
Sbjct: 176 STGSNSCLQPTSTNVNRRVHRKSRILDDAEDDDDD 210
>ref|XP_006470732.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X1 [Citrus sinensis] gi|568833055|ref|XP_006470733.1|
PREDICTED: chromodomain-helicase-DNA-binding protein
1-like isoform X2 [Citrus sinensis]
Length = 1777
Score = 76.6 bits (187), Expect = 3e-12
Identities = 41/96 (42%), Positives = 60/96 (62%)
Frame = +1
Query: 7 NIGNEESGRNSSEDSHEQRHRRLSQRGNVDIPADEMLSDDYYEQDGEEQSDSVHGSGQNH 186
N +E R S+D Q+ + +G D+PADEMLSD+YYEQDGEEQSDS+ G ++
Sbjct: 134 NSSDEREDRLESQDEG-QKPATKAAKGYSDVPADEMLSDEYYEQDGEEQSDSMQYRGFSN 192
Query: 187 TNISGSRFPLKPVSVNKKTAKKSRVIKDEEYEDDED 294
+ SR K V+VN +++SR +K + +DD+D
Sbjct: 193 SVGLNSRSQSKTVAVNSSVSRRSRALKRHKDDDDDD 228
>ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
gi|355518633|gb|AET00257.1|
Chromodomain-helicase-DNA-binding protein [Medicago
truncatula]
Length = 1739
Score = 76.3 bits (186), Expect = 4e-12
Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 5/102 (4%)
Frame = +1
Query: 4 NNIGNEESGRNSSEDSHEQRHRRLSQRGNVDIPADEMLSDDYYEQDGEEQSDSVHGSGQN 183
+N + E+GR SED Q+ +R + D+PA+EMLSD+YYEQDGE+QSDS+H +G
Sbjct: 134 DNSVDGETGRLDSEDDDGQKEVGKGRRSHSDVPAEEMLSDEYYEQDGEDQSDSLHYNGIQ 193
Query: 184 HTNISGSRFPLKPVSVNKKTAKKSRVIKDE-----EYEDDED 294
+ S K SV K +KSR+ D+ +YE++++
Sbjct: 194 KSTGRNSWPQQKSTSVKKPVRRKSRISDDDGDGDVDYEEEDE 235
>ref|XP_004491263.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 1-like [Cicer arietinum]
Length = 1738
Score = 75.9 bits (185), Expect = 5e-12
Identities = 40/96 (41%), Positives = 59/96 (61%), Gaps = 5/96 (5%)
Frame = +1
Query: 22 ESGRNSSEDSHEQRHRRLSQRGNVDIPADEMLSDDYYEQDGEEQSDSVHGSGQNHTNISG 201
E+GR SED E++ R + D+PAD+MLSD+YYEQDGE+QSDS+H +G +
Sbjct: 140 ETGRLDSEDDVEKKDAGKGPRSHSDVPADQMLSDEYYEQDGEDQSDSLHYNGIHKPAGPN 199
Query: 202 SRFPLKPVSVNKKTAKKSRVIKDE-----EYEDDED 294
S SVN+ KKSR+ D+ +YE++++
Sbjct: 200 SWSRKMSTSVNRNVRKKSRISDDDDDGDVDYEEEDE 235
>ref|XP_006446246.1| hypothetical protein CICLE_v100140192mg, partial [Citrus
clementina] gi|557548857|gb|ESR59486.1| hypothetical
protein CICLE_v100140192mg, partial [Citrus clementina]
Length = 572
Score = 75.5 bits (184), Expect = 7e-12
Identities = 41/96 (42%), Positives = 59/96 (61%)
Frame = +1
Query: 7 NIGNEESGRNSSEDSHEQRHRRLSQRGNVDIPADEMLSDDYYEQDGEEQSDSVHGSGQNH 186
N +E R S+D Q+ + +G D+PADEMLSD+YYEQDGEEQSDS+ G ++
Sbjct: 134 NSSDEREDRLESQDEG-QKPANKAAKGYSDVPADEMLSDEYYEQDGEEQSDSMQYRGFSN 192
Query: 187 TNISGSRFPLKPVSVNKKTAKKSRVIKDEEYEDDED 294
+ SR K V+VN +++SR +K + DD+D
Sbjct: 193 SVGLNSRSQSKTVAVNSSVSRRSRALKRHKDVDDDD 228
>gb|ESW13477.1| hypothetical protein PHAVU_008G199800g [Phaseolus vulgaris]
Length = 1759
Score = 74.7 bits (182), Expect = 1e-11
Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
Frame = +1
Query: 1 RNNIGNEES------GRNSSEDSHEQRHRRLSQRGNVDIPADEMLSDDYYEQDGEEQSDS 162
RN G+E++ GR S+D Q+ RG D+PA+EMLSD+YYEQDGEEQSDS
Sbjct: 127 RNADGSEDNSLDGRAGRLDSDDDDGQKEEGKGPRGLSDVPAEEMLSDEYYEQDGEEQSDS 186
Query: 163 VHGSGQNHTNISGSRFPLKPVSVNKKTAKKSRVIKDEEYEDDED 294
+H G + S S +P + + +T ++ D+ EDD+D
Sbjct: 187 IHYGGIKKPSESNS-WPQRMSTTANRTLHRNSRFSDDAEEDDDD 229
>ref|XP_002313369.1| hypothetical protein POPTR_0009s05250g [Populus trichocarpa]
gi|222849777|gb|EEE87324.1| hypothetical protein
POPTR_0009s05250g [Populus trichocarpa]
Length = 1748
Score = 74.7 bits (182), Expect = 1e-11
Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Frame = +1
Query: 4 NNIGNEESGRNSSEDSHEQRHRRLSQRGNVDIPADEMLSDDYYEQDGEEQSDSVHGSGQN 183
+N+ N GR SED Q+ +G+ D+PADEMLSD+YYEQDGE+QSD + G +
Sbjct: 126 DNVSNGRDGRLESEDEEGQKEVGRGGKGHSDVPADEMLSDEYYEQDGEDQSDLMRYRGFS 185
Query: 184 HTNISGSRFPLKPVSV-NKKTAKKSRVIKDEEYEDDED 294
SR KPV + N + ++SR + + E DD++
Sbjct: 186 KPVDLSSRLQSKPVPIKNNVSRRRSRGLHNSEGYDDDN 223
>ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X1 [Glycine max] gi|571506899|ref|XP_006595768.1|
PREDICTED: chromodomain-helicase-DNA-binding protein
1-like isoform X2 [Glycine max]
Length = 1764
Score = 72.8 bits (177), Expect = 5e-11
Identities = 43/107 (40%), Positives = 59/107 (55%), Gaps = 9/107 (8%)
Frame = +1
Query: 1 RNNIGNEESG------RNSSEDSHEQRHRRLSQRGNVDIPADEMLSDDYYEQDGEEQSDS 162
RN G+E++ R S+D Q+ RG+ D+PA+EMLSD+YYEQDGEEQSDS
Sbjct: 127 RNADGSEDNSLDGRVVRVDSDDDDGQKEAGKGPRGHSDVPAEEMLSDEYYEQDGEEQSDS 186
Query: 163 VHGSGQNHTNISGSRFPLKPVSVNKKTAKKSRV---IKDEEYEDDED 294
+H G S S S N+ + SR ++D + EDD+D
Sbjct: 187 LHYGGIKKPTESNSWPQRMSTSANRTLHRNSRFSDDVEDNDGEDDDD 233
>ref|XP_006575632.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
[Glycine max]
Length = 1766
Score = 72.0 bits (175), Expect = 8e-11
Identities = 43/104 (41%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Frame = +1
Query: 1 RNNIGNEES------GRNSSEDSHEQRHRRLSQRGNVDIPADEMLSDDYYEQDGEEQSDS 162
RN G+E++ GR S+D Q+ RG+ D+PA+EMLSD+YYEQDGEEQSDS
Sbjct: 127 RNADGSEDNSLDGRAGRLDSDDDDGQKEAGKGPRGHSDVPAEEMLSDEYYEQDGEEQSDS 186
Query: 163 VHGSGQNHTNISGSRFPLKPVSVNKKTAKKSRVIKDEEYEDDED 294
+H G S S S N+ + R D E D ED
Sbjct: 187 LHYGGIKKPTGSNSWPQRMSTSANRTLHRNLRFSDDVEDNDGED 230
>ref|XP_004252878.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
[Solanum lycopersicum]
Length = 1707
Score = 71.6 bits (174), Expect = 1e-10
Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 6/90 (6%)
Frame = +1
Query: 40 SEDSHEQRHRRLSQRGNVDIPADEMLSDDYYEQDGEEQSDSVHGSGQNHTNISGSRFPLK 219
SED Q+ S+ +PADEMLSD+YYEQDG++QSDS+H N ++ S+ +
Sbjct: 125 SEDEGRQKEMGKSR----SVPADEMLSDEYYEQDGDDQSDSLHYRAANPSSGYSSKLQSR 180
Query: 220 PVSVNKKTAKKSRVIKDEE------YEDDE 291
PVS +K ++K++ KD+E YEDD+
Sbjct: 181 PVSASKYASRKAKASKDQEDNEYADYEDDD 210
>ref|XP_003562521.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
[Brachypodium distachyon]
Length = 1734
Score = 70.9 bits (172), Expect = 2e-10
Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Frame = +1
Query: 82 RGNVDIPADEMLSDDYYEQDGEEQSDSVHGSGQNHTNISGSRFPLK--PVSVNKKTAKKS 255
RG+ ++PA+EMLSDDYYEQDGE+QSDS+H G +H + S S K P+ KK+ K +
Sbjct: 136 RGHGEVPAEEMLSDDYYEQDGEDQSDSLHRGGMSHPSCSSSGVAAKAVPLRQKKKSTKYN 195
Query: 256 RVIKDEE--YEDDED 294
D E Y DD D
Sbjct: 196 AYDDDNEDAYNDDND 210