BLASTX nr result
ID: Zingiber25_contig00040815
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00040815
(303 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002452153.1| hypothetical protein SORBIDRAFT_04g020730 [S... 137 1e-30
ref|XP_006648668.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymera... 137 1e-30
dbj|BAD23092.1| putative DNA polymerase epsilon catalytic subuni... 137 2e-30
ref|NP_001046939.2| Os02g0511900 [Oryza sativa Japonica Group] g... 137 2e-30
gb|EEE57064.1| hypothetical protein OsJ_06880 [Oryza sativa Japo... 137 2e-30
gb|AFW71551.1| putative DNA polymerase epsilon catalytic subunit... 136 3e-30
gb|AFW71549.1| putative DNA polymerase epsilon catalytic subunit... 136 3e-30
ref|XP_004952565.1| PREDICTED: DNA polymerase epsilon catalytic ... 135 7e-30
gb|EMT20828.1| DNA polymerase epsilon catalytic subunit A [Aegil... 135 7e-30
gb|EMS53030.1| DNA polymerase epsilon catalytic subunit A [Triti... 135 7e-30
dbj|BAJ96689.1| predicted protein [Hordeum vulgare subsp. vulgare] 135 7e-30
gb|EEC73256.1| hypothetical protein OsI_07377 [Oryza sativa Indi... 134 1e-29
ref|XP_003572557.1| PREDICTED: DNA polymerase epsilon catalytic ... 133 2e-29
ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ... 132 6e-29
emb|CBI17056.3| unnamed protein product [Vitis vinifera] 132 6e-29
gb|EXB53718.1| DNA polymerase epsilon catalytic subunit A [Morus... 131 8e-29
ref|XP_006471371.1| PREDICTED: DNA polymerase epsilon catalytic ... 130 1e-28
ref|XP_006424295.1| hypothetical protein CICLE_v10027662mg [Citr... 130 1e-28
ref|XP_006349108.1| PREDICTED: DNA polymerase epsilon catalytic ... 128 9e-28
ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p... 127 2e-27
>ref|XP_002452153.1| hypothetical protein SORBIDRAFT_04g020730 [Sorghum bicolor]
gi|241931984|gb|EES05129.1| hypothetical protein
SORBIDRAFT_04g020730 [Sorghum bicolor]
Length = 2135
Score = 137 bits (346), Expect = 1e-30
Identities = 68/100 (68%), Positives = 81/100 (81%)
Frame = -3
Query: 301 KIIIDTGKFELLAATAYCDSLLKTLQTRDLFEWIELEPLYFWHSLLFKDQFNYGGIRAKF 122
KIIIDTGK +L +A AYCDSLLKTLQTRDLFEWIELEPL+FWHSLLF DQ+NYGGI+AK
Sbjct: 1767 KIIIDTGKVDLSSAHAYCDSLLKTLQTRDLFEWIELEPLHFWHSLLFMDQYNYGGIQAKA 1826
Query: 121 QTEPPITNTEGDSQVEIVACWNMAEHLTKDIQALFHLRVS 2
Q + +++GD+ ++IV+ WNMAE L KD Q F L VS
Sbjct: 1827 QN---VDSSDGDNDIDIVSSWNMAEDLPKDTQDHFVLIVS 1863
>ref|XP_006648668.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic
subunit A-like [Oryza brachyantha]
Length = 2187
Score = 137 bits (345), Expect = 1e-30
Identities = 65/100 (65%), Positives = 79/100 (79%)
Frame = -3
Query: 301 KIIIDTGKFELLAATAYCDSLLKTLQTRDLFEWIELEPLYFWHSLLFKDQFNYGGIRAKF 122
KIIIDTGK EL +A AYCDSLLKTLQTRD+FEW+ELEPL++WHSLLF DQ+NYGGI+AK
Sbjct: 1762 KIIIDTGKVELPSARAYCDSLLKTLQTRDIFEWVELEPLHYWHSLLFMDQYNYGGIQAKM 1821
Query: 121 QTEPPITNTEGDSQVEIVACWNMAEHLTKDIQALFHLRVS 2
Q E +GD+ ++IV+ WN+AE+L K Q F L VS
Sbjct: 1822 QNETSEDGADGDNDIDIVSSWNIAEYLPKATQDHFVLIVS 1861
>dbj|BAD23092.1| putative DNA polymerase epsilon catalytic subunit protein isoform b
[Oryza sativa Japonica Group]
Length = 2257
Score = 137 bits (344), Expect = 2e-30
Identities = 64/100 (64%), Positives = 81/100 (81%)
Frame = -3
Query: 301 KIIIDTGKFELLAATAYCDSLLKTLQTRDLFEWIELEPLYFWHSLLFKDQFNYGGIRAKF 122
KIIIDTGK +LL+A AYCDSLLKTLQTRD+FEW+ELEPL++WHSLLF DQ+NYGGI+AK
Sbjct: 1886 KIIIDTGKVDLLSARAYCDSLLKTLQTRDIFEWVELEPLHYWHSLLFMDQYNYGGIQAKM 1945
Query: 121 QTEPPITNTEGDSQVEIVACWNMAEHLTKDIQALFHLRVS 2
Q +++GD+ ++IV+ WN+AE+L K Q F L VS
Sbjct: 1946 QNATSEGSSDGDNDIDIVSSWNIAEYLPKATQDHFVLIVS 1985
>ref|NP_001046939.2| Os02g0511900 [Oryza sativa Japonica Group]
gi|255670933|dbj|BAF08853.2| Os02g0511900 [Oryza sativa
Japonica Group]
Length = 2175
Score = 137 bits (344), Expect = 2e-30
Identities = 64/100 (64%), Positives = 81/100 (81%)
Frame = -3
Query: 301 KIIIDTGKFELLAATAYCDSLLKTLQTRDLFEWIELEPLYFWHSLLFKDQFNYGGIRAKF 122
KIIIDTGK +LL+A AYCDSLLKTLQTRD+FEW+ELEPL++WHSLLF DQ+NYGGI+AK
Sbjct: 1762 KIIIDTGKVDLLSARAYCDSLLKTLQTRDIFEWVELEPLHYWHSLLFMDQYNYGGIQAKM 1821
Query: 121 QTEPPITNTEGDSQVEIVACWNMAEHLTKDIQALFHLRVS 2
Q +++GD+ ++IV+ WN+AE+L K Q F L VS
Sbjct: 1822 QNATSEGSSDGDNDIDIVSSWNIAEYLPKATQDHFVLIVS 1861
>gb|EEE57064.1| hypothetical protein OsJ_06880 [Oryza sativa Japonica Group]
Length = 2127
Score = 137 bits (344), Expect = 2e-30
Identities = 64/100 (64%), Positives = 81/100 (81%)
Frame = -3
Query: 301 KIIIDTGKFELLAATAYCDSLLKTLQTRDLFEWIELEPLYFWHSLLFKDQFNYGGIRAKF 122
KIIIDTGK +LL+A AYCDSLLKTLQTRD+FEW+ELEPL++WHSLLF DQ+NYGGI+AK
Sbjct: 1756 KIIIDTGKVDLLSARAYCDSLLKTLQTRDIFEWVELEPLHYWHSLLFMDQYNYGGIQAKM 1815
Query: 121 QTEPPITNTEGDSQVEIVACWNMAEHLTKDIQALFHLRVS 2
Q +++GD+ ++IV+ WN+AE+L K Q F L VS
Sbjct: 1816 QNATSEGSSDGDNDIDIVSSWNIAEYLPKATQDHFVLIVS 1855
>gb|AFW71551.1| putative DNA polymerase epsilon catalytic subunit family protein [Zea
mays]
Length = 1717
Score = 136 bits (343), Expect = 3e-30
Identities = 67/100 (67%), Positives = 81/100 (81%)
Frame = -3
Query: 301 KIIIDTGKFELLAATAYCDSLLKTLQTRDLFEWIELEPLYFWHSLLFKDQFNYGGIRAKF 122
KIIIDTGK +L +A AYCDSLL+TLQTRDLFEWIELEPL+FWHSLLF DQ+NYGGI+AK
Sbjct: 1351 KIIIDTGKVDLSSAHAYCDSLLRTLQTRDLFEWIELEPLHFWHSLLFMDQYNYGGIQAKT 1410
Query: 121 QTEPPITNTEGDSQVEIVACWNMAEHLTKDIQALFHLRVS 2
Q + +++GD+ ++IV+ WNMAE L KD Q F L VS
Sbjct: 1411 QN---VDSSDGDNDIDIVSSWNMAEDLPKDTQDHFVLIVS 1447
>gb|AFW71549.1| putative DNA polymerase epsilon catalytic subunit family protein [Zea
mays]
Length = 1856
Score = 136 bits (343), Expect = 3e-30
Identities = 67/100 (67%), Positives = 81/100 (81%)
Frame = -3
Query: 301 KIIIDTGKFELLAATAYCDSLLKTLQTRDLFEWIELEPLYFWHSLLFKDQFNYGGIRAKF 122
KIIIDTGK +L +A AYCDSLL+TLQTRDLFEWIELEPL+FWHSLLF DQ+NYGGI+AK
Sbjct: 1490 KIIIDTGKVDLSSAHAYCDSLLRTLQTRDLFEWIELEPLHFWHSLLFMDQYNYGGIQAKT 1549
Query: 121 QTEPPITNTEGDSQVEIVACWNMAEHLTKDIQALFHLRVS 2
Q + +++GD+ ++IV+ WNMAE L KD Q F L VS
Sbjct: 1550 QN---VDSSDGDNDIDIVSSWNMAEDLPKDTQDHFVLIVS 1586
>ref|XP_004952565.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Setaria
italica]
Length = 2214
Score = 135 bits (339), Expect = 7e-30
Identities = 66/100 (66%), Positives = 81/100 (81%)
Frame = -3
Query: 301 KIIIDTGKFELLAATAYCDSLLKTLQTRDLFEWIELEPLYFWHSLLFKDQFNYGGIRAKF 122
KIIIDTGK +L +A AYCDSLLKTLQTRDLFEWIELEPL+FWHSLLF DQ+NYGGI+AK
Sbjct: 1846 KIIIDTGKVDLASAHAYCDSLLKTLQTRDLFEWIELEPLHFWHSLLFMDQYNYGGIQAKT 1905
Query: 121 QTEPPITNTEGDSQVEIVACWNMAEHLTKDIQALFHLRVS 2
Q + +++ D+ ++IV+ WN+AE+L KD Q F L VS
Sbjct: 1906 QN---VDSSDDDNDIDIVSSWNIAEYLPKDTQDHFVLIVS 1942
>gb|EMT20828.1| DNA polymerase epsilon catalytic subunit A [Aegilops tauschii]
Length = 609
Score = 135 bits (339), Expect = 7e-30
Identities = 65/100 (65%), Positives = 79/100 (79%)
Frame = -3
Query: 301 KIIIDTGKFELLAATAYCDSLLKTLQTRDLFEWIELEPLYFWHSLLFKDQFNYGGIRAKF 122
KIIIDTGK +L +A AYCDSLLKTLQTRDLFEWIELEPL++WHSLLF DQ+NYGGI+AK
Sbjct: 205 KIIIDTGKVDLPSARAYCDSLLKTLQTRDLFEWIELEPLHYWHSLLFMDQYNYGGIQAKT 264
Query: 121 QTEPPITNTEGDSQVEIVACWNMAEHLTKDIQALFHLRVS 2
Q +++GD ++IV+ WN+AE+L K Q F L VS
Sbjct: 265 QNVTSADSSDGDDDIDIVSSWNIAEYLPKATQDHFVLIVS 304
>gb|EMS53030.1| DNA polymerase epsilon catalytic subunit A [Triticum urartu]
Length = 443
Score = 135 bits (339), Expect = 7e-30
Identities = 65/100 (65%), Positives = 79/100 (79%)
Frame = -3
Query: 301 KIIIDTGKFELLAATAYCDSLLKTLQTRDLFEWIELEPLYFWHSLLFKDQFNYGGIRAKF 122
KIIIDTGK +L +A AYCDSLLKTLQTRDLFEWIELEPL++WHSLLF DQ+NYGGI+AK
Sbjct: 226 KIIIDTGKVDLPSARAYCDSLLKTLQTRDLFEWIELEPLHYWHSLLFMDQYNYGGIQAKT 285
Query: 121 QTEPPITNTEGDSQVEIVACWNMAEHLTKDIQALFHLRVS 2
Q +++GD ++IV+ WN+AE+L K Q F L VS
Sbjct: 286 QNVTSADSSDGDDDIDIVSSWNIAEYLPKATQDHFVLIVS 325
>dbj|BAJ96689.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 727
Score = 135 bits (339), Expect = 7e-30
Identities = 64/100 (64%), Positives = 80/100 (80%)
Frame = -3
Query: 301 KIIIDTGKFELLAATAYCDSLLKTLQTRDLFEWIELEPLYFWHSLLFKDQFNYGGIRAKF 122
KIIIDTGK +L +A AYCDSLLKTLQTRDLFEWIELEPL++WHSLLF DQ+NYGGI+AK
Sbjct: 356 KIIIDTGKVDLPSARAYCDSLLKTLQTRDLFEWIELEPLHYWHSLLFMDQYNYGGIQAKT 415
Query: 121 QTEPPITNTEGDSQVEIVACWNMAEHLTKDIQALFHLRVS 2
Q + +++G+ ++IV+ WN+AE+L K Q F L VS
Sbjct: 416 QNVTSVDSSDGEDDIDIVSSWNIAEYLPKATQDHFVLIVS 455
>gb|EEC73256.1| hypothetical protein OsI_07377 [Oryza sativa Indica Group]
Length = 2081
Score = 134 bits (338), Expect = 1e-29
Identities = 63/100 (63%), Positives = 80/100 (80%)
Frame = -3
Query: 301 KIIIDTGKFELLAATAYCDSLLKTLQTRDLFEWIELEPLYFWHSLLFKDQFNYGGIRAKF 122
KIIIDTGK +L +A AYCDSLLKTLQTRD+FEW+ELEPL++WHSLLF DQ+NYGGI+AK
Sbjct: 1710 KIIIDTGKVDLSSARAYCDSLLKTLQTRDIFEWVELEPLHYWHSLLFMDQYNYGGIQAKM 1769
Query: 121 QTEPPITNTEGDSQVEIVACWNMAEHLTKDIQALFHLRVS 2
Q +++GD+ ++IV+ WN+AE+L K Q F L VS
Sbjct: 1770 QNATSEGSSDGDNDIDIVSSWNIAEYLPKATQDHFVLIVS 1809
>ref|XP_003572557.1| PREDICTED: DNA polymerase epsilon catalytic subunit A [Brachypodium
distachyon]
Length = 2127
Score = 133 bits (335), Expect = 2e-29
Identities = 65/100 (65%), Positives = 79/100 (79%)
Frame = -3
Query: 301 KIIIDTGKFELLAATAYCDSLLKTLQTRDLFEWIELEPLYFWHSLLFKDQFNYGGIRAKF 122
KIIIDTGK +L +A AYCDSLLKTLQTRDLFEWIELEPL++WHSLLF DQ+NYGGI+AK
Sbjct: 1756 KIIIDTGKADLPSARAYCDSLLKTLQTRDLFEWIELEPLHYWHSLLFMDQYNYGGIQAKT 1815
Query: 121 QTEPPITNTEGDSQVEIVACWNMAEHLTKDIQALFHLRVS 2
Q ++GD+ ++IV+ WN+AE+L K Q F L VS
Sbjct: 1816 QNLTSEDESDGDNDIDIVSSWNIAEYLPKATQDHFVLIVS 1855
>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
vinifera]
Length = 2214
Score = 132 bits (331), Expect = 6e-29
Identities = 66/107 (61%), Positives = 81/107 (75%), Gaps = 7/107 (6%)
Frame = -3
Query: 301 KIIIDTGKFELLAATAYCDSLLKTLQTRDLFEWIELEPLYFWHSLLFKDQFNYGGIRAKF 122
K+IIDTGK +L AA AYCDSLLKTLQTRDLFEWIE+EPL+FWHSLLF DQ+NYGG++A+
Sbjct: 1846 KVIIDTGKSDLSAAKAYCDSLLKTLQTRDLFEWIEIEPLHFWHSLLFMDQYNYGGVQARS 1905
Query: 121 -------QTEPPITNTEGDSQVEIVACWNMAEHLTKDIQALFHLRVS 2
++P + E +SQV+IV+ WN+AE L K IQ F L VS
Sbjct: 1906 HGGSLIGSSDPTSESIEDESQVDIVSSWNIAEQLPKTIQDHFVLIVS 1952
>emb|CBI17056.3| unnamed protein product [Vitis vinifera]
Length = 2723
Score = 132 bits (331), Expect = 6e-29
Identities = 66/107 (61%), Positives = 81/107 (75%), Gaps = 7/107 (6%)
Frame = -3
Query: 301 KIIIDTGKFELLAATAYCDSLLKTLQTRDLFEWIELEPLYFWHSLLFKDQFNYGGIRAKF 122
K+IIDTGK +L AA AYCDSLLKTLQTRDLFEWIE+EPL+FWHSLLF DQ+NYGG++A+
Sbjct: 2355 KVIIDTGKSDLSAAKAYCDSLLKTLQTRDLFEWIEIEPLHFWHSLLFMDQYNYGGVQARS 2414
Query: 121 -------QTEPPITNTEGDSQVEIVACWNMAEHLTKDIQALFHLRVS 2
++P + E +SQV+IV+ WN+AE L K IQ F L VS
Sbjct: 2415 HGGSLIGSSDPTSESIEDESQVDIVSSWNIAEQLPKTIQDHFVLIVS 2461
>gb|EXB53718.1| DNA polymerase epsilon catalytic subunit A [Morus notabilis]
Length = 1425
Score = 131 bits (330), Expect = 8e-29
Identities = 65/100 (65%), Positives = 77/100 (77%)
Frame = -3
Query: 301 KIIIDTGKFELLAATAYCDSLLKTLQTRDLFEWIELEPLYFWHSLLFKDQFNYGGIRAKF 122
K+IIDTGKF+L AA AYCD LLK LQTRDLFEWIELEPL FWHSLLF DQ+NYGGI AK
Sbjct: 1056 KVIIDTGKFDLSAAKAYCDCLLKALQTRDLFEWIELEPLQFWHSLLFMDQYNYGGIPAKA 1115
Query: 121 QTEPPITNTEGDSQVEIVACWNMAEHLTKDIQALFHLRVS 2
+T+G+S+V+I++ WN+AE+L K IQ F VS
Sbjct: 1116 D-----ESTDGESEVDIISSWNIAEYLPKKIQDYFVFIVS 1150
>ref|XP_006471371.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Citrus
sinensis]
Length = 2206
Score = 130 bits (328), Expect = 1e-28
Identities = 65/100 (65%), Positives = 79/100 (79%)
Frame = -3
Query: 301 KIIIDTGKFELLAATAYCDSLLKTLQTRDLFEWIELEPLYFWHSLLFKDQFNYGGIRAKF 122
K+IIDTGKF+L AA AYCDSLLK LQTR+LFEWIELEP++FWHSLLF DQ+NYGGI A+
Sbjct: 1840 KVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARA 1899
Query: 121 QTEPPITNTEGDSQVEIVACWNMAEHLTKDIQALFHLRVS 2
+ + DSQV+IV+ WN+AE+L K+IQ F L VS
Sbjct: 1900 D-----ESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVS 1934
>ref|XP_006424295.1| hypothetical protein CICLE_v10027662mg [Citrus clementina]
gi|557526229|gb|ESR37535.1| hypothetical protein
CICLE_v10027662mg [Citrus clementina]
Length = 2206
Score = 130 bits (328), Expect = 1e-28
Identities = 65/100 (65%), Positives = 79/100 (79%)
Frame = -3
Query: 301 KIIIDTGKFELLAATAYCDSLLKTLQTRDLFEWIELEPLYFWHSLLFKDQFNYGGIRAKF 122
K+IIDTGKF+L AA AYCDSLLK LQTR+LFEWIELEP++FWHSLLF DQ+NYGGI A+
Sbjct: 1840 KVIIDTGKFDLSAAKAYCDSLLKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARA 1899
Query: 121 QTEPPITNTEGDSQVEIVACWNMAEHLTKDIQALFHLRVS 2
+ + DSQV+IV+ WN+AE+L K+IQ F L VS
Sbjct: 1900 D-----ESLDDDSQVDIVSSWNIAEYLPKEIQDHFVLVVS 1934
>ref|XP_006349108.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Solanum
tuberosum]
Length = 2218
Score = 128 bits (321), Expect = 9e-28
Identities = 63/107 (58%), Positives = 80/107 (74%), Gaps = 7/107 (6%)
Frame = -3
Query: 301 KIIIDTGKFELLAATAYCDSLLKTLQTRDLFEWIELEPLYFWHSLLFKDQFNYGGIRAKF 122
KIIIDTGK ++ AA AYCD+++K +Q+R+LFEWIELEPL FWHSLLF DQ+NYGGIRA+
Sbjct: 1837 KIIIDTGKSDIFAAKAYCDNVIKNVQSRELFEWIELEPLQFWHSLLFMDQYNYGGIRARH 1896
Query: 121 QTEPPITNTE-------GDSQVEIVACWNMAEHLTKDIQALFHLRVS 2
EP N+E G+SQ++IV+ WN+AE+L K Q F L VS
Sbjct: 1897 SDEPLEVNSEPGEESVCGESQIDIVSSWNIAENLPKATQDRFILIVS 1943
>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
communis] gi|223531477|gb|EEF33309.1| DNA polymerase
epsilon, catalytic subunit, putative [Ricinus communis]
Length = 2227
Score = 127 bits (318), Expect = 2e-27
Identities = 68/108 (62%), Positives = 80/108 (74%), Gaps = 8/108 (7%)
Frame = -3
Query: 301 KIIIDTGKFELLAATAYCDSLLKTLQTRDLFEWIELEPLYFWHSLLFKDQFNYGGIRAKF 122
K+IIDTGKF L AA AYCDSLLKTLQTR+LFEWIELEPL FWHSLLF DQ+NYGGI A+
Sbjct: 1849 KVIIDTGKFSLSAAKAYCDSLLKTLQTRELFEWIELEPLQFWHSLLFMDQYNYGGIPAR- 1907
Query: 121 QTEPPITNTEG--------DSQVEIVACWNMAEHLTKDIQALFHLRVS 2
I+++E +SQV+IV+ WN+AE+L K IQ F L VS
Sbjct: 1908 --ADDISHSESQGAHSQRQESQVDIVSSWNIAEYLPKTIQDHFVLIVS 1953