BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00040749
         (612 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX94887.1| retrotransposon protein, putative, Ty1-copia sub-...    92   1e-16
gb|ABA93936.1| retrotransposon protein, putative, unclassified, ...    90   4e-16
gb|AAO37468.1| putative polyprotein [Oryza sativa Japonica Group]      90   6e-16
ref|NP_001174783.1| Os06g0363701 [Oryza sativa Japonica Group] g...    90   6e-16
gb|ABF96984.1| retrotransposon protein, putative, Ty1-copia subc...    90   6e-16
gb|AAK00427.2| Putative copia-type pol polyprotein [Oryza sativa...    89   1e-15
gb|ABF95221.1| retrotransposon protein, putative, unclassified [...    88   2e-15
gb|ABF97186.1| retrotransposon protein, putative, unclassified [...    88   2e-15
gb|AAN05371.1| Putative retroelement [Oryza sativa Japonica Grou...    87   3e-15
gb|AAN60991.1| Putative Zea mays retrotransposon Opie-2 [Oryza s...    87   4e-15
gb|AAL75483.1|AF466202_9 putative pol protein [Zea mays]               86   8e-15
gb|AEJ07944.1| Opie1 putative pol protein [Zea diploperennis]          86   8e-15
gb|AAL58177.1|AC093181_23 putative polyprotein [Oryza sativa Jap...    86   1e-14
emb|CAE03782.2| OSJNBa0063G07.6 [Oryza sativa Japonica Group]          86   1e-14
emb|CAN66543.1| hypothetical protein VITISV_036480 [Vitis vinifera]    86   1e-14
emb|CAH66560.1| OSIGBa0113K06.6 [Oryza sativa Indica Group]            86   1e-14
gb|AAP53333.2| retrotransposon protein, putative, unclassified, ...    86   1e-14
gb|ABF97883.1| retrotransposon protein, putative, unclassified [...    86   1e-14
emb|CAE05094.3| OSJNBa0009K15.14 [Oryza sativa Japonica Group]         86   1e-14
gb|AEJ07931.1| Opie3 pol protein [Zea mays subsp. mexicana]            85   1e-14

>gb|AAX94887.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77550139|gb|ABA92936.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1718

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 51/141 (36%), Positives = 78/141 (55%), Gaps = 4/141 (2%)
 Frame = +1

Query: 7    FELVGYYDFHYVGYKLDHXXXXXXXXXXXXXXXXXXX--QHYVALSSIMAEYIAMDECIV 180
            FEL+GY D  Y G K+D                      Q+ +ALS+  AEY+A D C  
Sbjct: 1037 FELLGYSDSDYAGCKVDRKSTTGTCQFLRQSLVSWSSKKQNSIALSTAEAEYVAADSCCA 1096

Query: 181  QLLWMMHILEDYQFNSKNVPSVL*QCEHY*SNK--KNMMRHFRTKHSKSDVKHHFIRDYV 354
            QLLWM   L+D+ +N   +P +   C++  + K   N ++H RTKH   D++HHF+RD+ 
Sbjct: 1097 QLLWMKQTLKDFGYNFTKIPLL---CDNESATKIANNPVQHSRTKH--IDIRHHFLRDHE 1151

Query: 355  ARNDIVLNYIKSKSNIAHIFT 417
             + DI L +++++S +A IFT
Sbjct: 1152 TKGDICLTHVRTESQLADIFT 1172


>gb|ABA93936.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1533

 Score = 90.1 bits (222), Expect = 4e-16
 Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 2/139 (1%)
 Frame = +1

Query: 7    FELVGYYDFHYVGYKLDHXXXXXXXXXXXXXXXXXXX--QHYVALSSIMAEYIAMDECIV 180
            FEL+GY D  Y G K+D                      Q+++ALS+  AEY+A   C  
Sbjct: 1374 FELLGYSDSDYAGCKVDRKSTTGTCQFLGQSLVSWSSKKQNFIALSTAEAEYVAAGSCCA 1433

Query: 181  QLLWMMHILEDYQFNSKNVPSVL*QCEHY*SNKKNMMRHFRTKHSKSDVKHHFIRDYVAR 360
            QL+WM   L+D+ +N   +P +L   E+      N ++H RTKH   D++HHF+RD+  +
Sbjct: 1434 QLIWMKQTLKDFGYNFTKIP-LLCDNENVIKIANNHVQHSRTKH--IDIRHHFLRDHETK 1490

Query: 361  NDIVLNYIKSKSNIAHIFT 417
             DI L +++++S +A IFT
Sbjct: 1491 GDICLTHVRTESQLADIFT 1509


>gb|AAO37468.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1128

 Score = 89.7 bits (221), Expect = 6e-16
 Identities = 55/141 (39%), Positives = 78/141 (55%), Gaps = 4/141 (2%)
 Frame = +1

Query: 7    FELVGYYDFHYVGYKLDHXXXXXXXXXXXXXXXXXXX--QHYVALSSIMAEYIAMDECIV 180
            F+LVGY D  Y GYK+D                      Q+ VALS+  AEYI+   C  
Sbjct: 967  FKLVGYSDSDYAGYKVDRKSTSGSCQMLGRSLVSWSSKKQNSVALSTAEAEYISAGSCCA 1026

Query: 181  QLLWMMHILEDYQFNSKNVPSVL*QCEHY*SNK--KNMMRHFRTKHSKSDVKHHFIRDYV 354
            QLLWM  IL DY  +     + L  C +  + K   N ++HFRTKH   D++HHF+ D+V
Sbjct: 1027 QLLWMKQILLDYGISFTETQTPL-LCNNDSTIKIANNPVQHFRTKHI--DIRHHFLTDHV 1083

Query: 355  ARNDIVLNYIKSKSNIAHIFT 417
            A+ DIV+++I+++  +A IFT
Sbjct: 1084 AKCDIVISHIRTEDQLADIFT 1104


>ref|NP_001174783.1| Os06g0363701 [Oryza sativa Japonica Group]
            gi|255677036|dbj|BAH93511.1| Os06g0363701 [Oryza sativa
            Japonica Group]
          Length = 1355

 Score = 89.7 bits (221), Expect = 6e-16
 Identities = 51/141 (36%), Positives = 77/141 (54%), Gaps = 4/141 (2%)
 Frame = +1

Query: 7    FELVGYYDFHYVGYKLDHXXXXXXXXXXXXXXXXXXX--QHYVALSSIMAEYIAMDECIV 180
            FEL+GY D  Y G K+D                      Q+ +ALS+  AEY+A D C  
Sbjct: 640  FELLGYSDSDYAGCKVDRKSTTGTCQFLGWSLVSWSSKKQNSIALSTAEAEYVAADSCCA 699

Query: 181  QLLWMMHILEDYQFNSKNVPSVL*QCEHY*SNK--KNMMRHFRTKHSKSDVKHHFIRDYV 354
            QLLWM   L+D+ +N   +P +   C++  + K   N ++H RTKH   D++HHF+RD+ 
Sbjct: 700  QLLWMRQTLKDFGYNFTKIPLL---CDNESAIKIANNPVQHSRTKH--IDIRHHFLRDHE 754

Query: 355  ARNDIVLNYIKSKSNIAHIFT 417
             + DI L ++ ++S +A IFT
Sbjct: 755  TKGDICLTHVTTESQLADIFT 775


>gb|ABF96984.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1115

 Score = 89.7 bits (221), Expect = 6e-16
 Identities = 55/141 (39%), Positives = 78/141 (55%), Gaps = 4/141 (2%)
 Frame = +1

Query: 7    FELVGYYDFHYVGYKLDHXXXXXXXXXXXXXXXXXXX--QHYVALSSIMAEYIAMDECIV 180
            F+LVGY D  Y GYK+D                      Q+ VALS+  AEYI+   C  
Sbjct: 954  FKLVGYSDSDYAGYKVDRKSTSGSCQMLGRSLVSWSSKKQNSVALSTAEAEYISAGSCCA 1013

Query: 181  QLLWMMHILEDYQFNSKNVPSVL*QCEHY*SNK--KNMMRHFRTKHSKSDVKHHFIRDYV 354
            QLLWM  IL DY  +     + L  C +  + K   N ++HFRTKH   D++HHF+ D+V
Sbjct: 1014 QLLWMKQILLDYGISFTETQTPL-LCNNDSTIKIANNPVQHFRTKHI--DIRHHFLTDHV 1070

Query: 355  ARNDIVLNYIKSKSNIAHIFT 417
            A+ DIV+++I+++  +A IFT
Sbjct: 1071 AKCDIVISHIRTEDQLADIFT 1091


>gb|AAK00427.2| Putative copia-type pol polyprotein [Oryza sativa Japonica Group]
            gi|31429784|gb|AAP51786.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1377

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 54/141 (38%), Positives = 78/141 (55%), Gaps = 4/141 (2%)
 Frame = +1

Query: 7    FELVGYYDFHYVGYKLDHXXXXXXXXXXXXXXXXXXX--QHYVALSSIMAEYIAMDECIV 180
            F+LVGY D  Y G K+D                      Q+ VALS+  AEY++   C  
Sbjct: 1218 FKLVGYSDSDYAGCKVDRKSTSCSFQMLGRSLVSWSSKKQNSVALSTAEAEYVSAGSCCA 1277

Query: 181  QLLWMMHILEDYQFNSKNVPSVL*QCEHY*SNK--KNMMRHFRTKHSKSDVKHHFIRDYV 354
            QLLWM  IL DY  +    P +   C++  + K   N ++H RTKH   D++HHF+RD+V
Sbjct: 1278 QLLWMKQILLDYGISFTKTPLL---CDNDSAIKIANNPVQHSRTKHI--DIRHHFLRDHV 1332

Query: 355  ARNDIVLNYIKSKSNIAHIFT 417
            A+ DIV+++I++K  +A IFT
Sbjct: 1333 AKCDIVISHIRTKDQLADIFT 1353


>gb|ABF95221.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2111

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 4/141 (2%)
 Frame = +1

Query: 7    FELVGYYDFHYVGYKLDHXXXXXXXXXXXXXXXXXXX--QHYVALSSIMAEYIAMDECIV 180
            FEL+GY D  Y G K+D                      Q+ +ALS+  AEY+A   C  
Sbjct: 1408 FELLGYSDSDYAGCKVDRKSTTGTCQFLGRSLVSWSSKKQNSIALSTAEAEYVAAGSCCA 1467

Query: 181  QLLWMMHILEDYQFNSKNVPSVL*QCEHY*SNK--KNMMRHFRTKHSKSDVKHHFIRDYV 354
            QLLWM   L+D+ +N   +P +   C++  + K   N ++H RTKH   D++HHF+RD+ 
Sbjct: 1468 QLLWMRQTLKDFGYNFTKIPLL---CDNESAIKIANNPIQHSRTKH--IDIRHHFLRDHE 1522

Query: 355  ARNDIVLNYIKSKSNIAHIFT 417
             + DI L +++++S +A IFT
Sbjct: 1523 TKGDICLTHVRTESQLADIFT 1543


>gb|ABF97186.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1759

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 4/141 (2%)
 Frame = +1

Query: 7    FELVGYYDFHYVGYKLDHXXXXXXXXXXXXXXXXXXX--QHYVALSSIMAEYIAMDECIV 180
            FEL+GY D  Y G K+D                      Q+ +ALS+  AEY+A   C  
Sbjct: 1450 FELLGYSDSDYAGCKVDRKSTTGTCQFLGRSLVSWSSKKQNSIALSTTEAEYVAAGSCCA 1509

Query: 181  QLLWMMHILEDYQFNSKNVPSVL*QCEHY*SNK--KNMMRHFRTKHSKSDVKHHFIRDYV 354
            QLLWM   L+D+ +N   +P +   C++  + K   N ++H RTKH   D++HHF+RD+ 
Sbjct: 1510 QLLWMKQTLKDFGYNFTKIPLL---CDNESAIKIANNPVQHSRTKH--IDIRHHFLRDHE 1564

Query: 355  ARNDIVLNYIKSKSNIAHIFT 417
             + DI L +++++S +A IFT
Sbjct: 1565 TKGDIFLTHVRTESQLADIFT 1585


>gb|AAN05371.1| Putative retroelement [Oryza sativa Japonica Group]
            gi|31431391|gb|AAP53179.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1299

 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 4/141 (2%)
 Frame = +1

Query: 7    FELVGYYDFHYVGYKLDHXXXXXXXXXXXXXXXXXXX--QHYVALSSIMAEYIAMDECIV 180
            F+LVGY D  Y G K+D                      Q+ VALS+  AEY++   C  
Sbjct: 1140 FKLVGYSDSDYAGCKVDRKSTSGSCQMLGRSLVSWSSKKQNSVALSTAEAEYVSAGSCCA 1199

Query: 181  QLLWMMHILEDYQFNSKNVPSVL*QCEHY*SNK--KNMMRHFRTKHSKSDVKHHFIRDYV 354
            QLLWM  IL DY  +    P +   C++  + K   N ++H RTKH   D++HHF+RD+V
Sbjct: 1200 QLLWMKQILLDYGISFTKTPLL---CDNDSAIKIANNPVQHSRTKHI--DIRHHFLRDHV 1254

Query: 355  ARNDIVLNYIKSKSNIAHIFT 417
             ++DIV+++I+++  +A IFT
Sbjct: 1255 VKSDIVISHIRTEDQLADIFT 1275


>gb|AAN60991.1| Putative Zea mays retrotransposon Opie-2 [Oryza sativa Japonica
            Group] gi|108706958|gb|ABF94753.1| retrotransposon
            protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2011

 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 53/141 (37%), Positives = 77/141 (54%), Gaps = 4/141 (2%)
 Frame = +1

Query: 7    FELVGYYDFHYVGYKLDHXXXXXXXXXXXXXXXXXXX--QHYVALSSIMAEYIAMDECIV 180
            F+LVGY D  Y G K+D                      Q++VAL    AEY++   C  
Sbjct: 1429 FKLVGYSDSDYAGCKVDRKSTSGSCQMLGRSLVSWSSKKQNFVALFIAEAEYVSAGSCCA 1488

Query: 181  QLLWMMHILEDYQFNSKNVPSVL*QCEHY*SNK--KNMMRHFRTKHSKSDVKHHFIRDYV 354
            QLLWM  IL DY  +    P +   CE+  + K   N ++H RTKH   D++HHF+RD+V
Sbjct: 1489 QLLWMKQILLDYGISFTKTPLL---CENDSAIKIANNPVQHSRTKHI--DIRHHFLRDHV 1543

Query: 355  ARNDIVLNYIKSKSNIAHIFT 417
            A+ DIV+++I+++  +A IFT
Sbjct: 1544 AKCDIVISHIRTEDQLADIFT 1564


>gb|AAL75483.1|AF466202_9 putative pol protein [Zea mays]
          Length = 1553

 Score = 85.9 bits (211), Expect = 8e-15
 Identities = 51/140 (36%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
 Frame = +1

Query: 4    TFELVGYYDFHYVGYKLDHXXXXXXXXXXXXXXXXXXX--QHYVALSSIMAEYIAMDECI 177
            TF+L+GY D  Y G K+D                      Q  VALS+  AEY+A  +C 
Sbjct: 1393 TFDLIGYSDSDYAGCKVDRKSTSGTCQFLGRSLVSWSSKKQTSVALSTAEAEYVAAGQCC 1452

Query: 178  VQLLWMMHILEDYQFNSKNVPSVL*QCEHY*SNKKNMMRHFRTKHSKSDVKHHFIRDYVA 357
             QLLWM   L D+ +N   VP +L   E       N + H RTKH   D++HHF+RD+  
Sbjct: 1453 AQLLWMRQTLRDFGYNLNKVP-LLCDNESAIRMADNPVEHSRTKH--IDIRHHFLRDHQQ 1509

Query: 358  RNDIVLNYIKSKSNIAHIFT 417
            + DI + Y+ +++ +A IFT
Sbjct: 1510 KGDIEVFYVSTENQLADIFT 1529


>gb|AEJ07944.1| Opie1 putative pol protein [Zea diploperennis]
          Length = 1065

 Score = 85.9 bits (211), Expect = 8e-15
 Identities = 51/140 (36%), Positives = 74/140 (52%), Gaps = 2/140 (1%)
 Frame = +1

Query: 4    TFELVGYYDFHYVGYKLDHXXXXXXXXXXXXXXXXXXX--QHYVALSSIMAEYIAMDECI 177
            TF+L+GY D  Y G K+D                      Q  VALS+  AEY+A  +C 
Sbjct: 905  TFDLIGYSDSDYAGCKVDRKSTSGTCQFLGRSLVSWSSKKQTSVALSTAEAEYVAAGQCC 964

Query: 178  VQLLWMMHILEDYQFNSKNVPSVL*QCEHY*SNKKNMMRHFRTKHSKSDVKHHFIRDYVA 357
            VQLLWM   L D+ +N   VP +L   E      +N + H RTKH   D++HHF+RD+  
Sbjct: 965  VQLLWMRQTLRDFGYNLSKVP-LLCDNESAIRIAENPVEHSRTKH--IDIRHHFLRDHQQ 1021

Query: 358  RNDIVLNYIKSKSNIAHIFT 417
            + DI + ++ +++ +A IFT
Sbjct: 1022 KGDIEVFHVSTENQLADIFT 1041


>gb|AAL58177.1|AC093181_23 putative polyprotein [Oryza sativa Japonica Group]
          Length = 877

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 49/139 (35%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
 Frame = +1

Query: 7   FELVGYYDFHYVGYKLDHXXXXXXXXXXXXXXXXXXX--QHYVALSSIMAEYIAMDECIV 180
           FEL+GY D  Y G K+D                      Q+ +ALS+  AEY+A   C  
Sbjct: 254 FELLGYSDSDYAGCKVDRKSTTGTCQFLGRSLVSWSSKKQNSIALSTAEAEYVAAGFCCA 313

Query: 181 QLLWMMHILEDYQFNSKNVPSVL*QCEHY*SNKKNMMRHFRTKHSKSDVKHHFIRDYVAR 360
           QLLWM   L+D+ +N   +P +L   E       N ++H RTKH   D++HHF+RD+  +
Sbjct: 314 QLLWMRQTLKDFGYNFTKIP-LLCDNESVIKIANNPVQHSRTKH--IDIRHHFLRDHETK 370

Query: 361 NDIVLNYIKSKSNIAHIFT 417
            DI L +++++S +  IFT
Sbjct: 371 GDICLTHVRTESQLTDIFT 389


>emb|CAE03782.2| OSJNBa0063G07.6 [Oryza sativa Japonica Group]
          Length = 1539

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 52/141 (36%), Positives = 77/141 (54%), Gaps = 4/141 (2%)
 Frame = +1

Query: 7    FELVGYYDFHYVGYKLDHXXXXXXXXXXXXXXXXXXX--QHYVALSSIMAEYIAMDECIV 180
            F+LVGY D  Y G K+D                      Q+ VALS+  AEY++   C  
Sbjct: 1380 FKLVGYSDSDYAGCKVDRNSTSGSCQMLGRSLVSWSSKKQNSVALSTAEAEYVSAGSCCA 1439

Query: 181  QLLWMMHILEDYQFNSKNVPSVL*QCEHY*SNK--KNMMRHFRTKHSKSDVKHHFIRDYV 354
            QLLWM   L DY  +    P +   C++  + K   N ++H RTKH   D++HHF+RD+V
Sbjct: 1440 QLLWMKQTLLDYGISFTKTPLL---CDNDSAIKIANNPVQHSRTKHI--DIRHHFLRDHV 1494

Query: 355  ARNDIVLNYIKSKSNIAHIFT 417
            A+ DIV+++I+++  +A IFT
Sbjct: 1495 AKCDIVISHIRTEDQLADIFT 1515


>emb|CAN66543.1| hypothetical protein VITISV_036480 [Vitis vinifera]
          Length = 328

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 50/143 (34%), Positives = 76/143 (53%), Gaps = 4/143 (2%)
 Frame = +1

Query: 1   ETFELVGYYDFHYVGYKLD--HXXXXXXXXXXXXXXXXXXXQHYVALSSIMAEYIAMDEC 174
           + FEL+GY D  + G K++  +                   Q+ VALS+  AEYIA D C
Sbjct: 171 DNFELIGYSDADFAGCKVERKNTSDTCHFLGHSLVSWHSKKQNSVALSTTKAEYIAADLC 230

Query: 175 IVQLLWMMHILEDYQFNSKNVPSVL*QCEH--Y*SNKKNMMRHFRTKHSKSDVKHHFIRD 348
             Q+LWM   L D+    + VP    +C++    +  KN M+H RTKH   +++HHF+RD
Sbjct: 231 CAQILWMKQTLSDFNLIFEYVPI---KCDNTSAINISKNPMQHSRTKH--IEIRHHFLRD 285

Query: 349 YVARNDIVLNYIKSKSNIAHIFT 417
           +  + DI L ++ +K  +A IFT
Sbjct: 286 HAQKGDITLEFVSTKDQLADIFT 308


>emb|CAH66560.1| OSIGBa0113K06.6 [Oryza sativa Indica Group]
          Length = 1539

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 52/141 (36%), Positives = 77/141 (54%), Gaps = 4/141 (2%)
 Frame = +1

Query: 7    FELVGYYDFHYVGYKLDHXXXXXXXXXXXXXXXXXXX--QHYVALSSIMAEYIAMDECIV 180
            F+LVGY D  Y G K+D                      Q+ VALS+  AEY++   C  
Sbjct: 1380 FKLVGYSDSDYAGCKVDRNSTSGSCQMLGRSLVSWSSKKQNSVALSTAEAEYVSAGSCCA 1439

Query: 181  QLLWMMHILEDYQFNSKNVPSVL*QCEHY*SNK--KNMMRHFRTKHSKSDVKHHFIRDYV 354
            QLLWM   L DY  +    P +   C++  + K   N ++H RTKH   D++HHF+RD+V
Sbjct: 1440 QLLWMKQTLLDYGISFTKTPLL---CDNDSAIKIANNPVQHSRTKHI--DIRHHFLRDHV 1494

Query: 355  ARNDIVLNYIKSKSNIAHIFT 417
            A+ DIV+++I+++  +A IFT
Sbjct: 1495 AKCDIVISHIRTEDQLADIFT 1515


>gb|AAP53333.2| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group]
          Length = 880

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 49/139 (35%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
 Frame = +1

Query: 7   FELVGYYDFHYVGYKLDHXXXXXXXXXXXXXXXXXXX--QHYVALSSIMAEYIAMDECIV 180
           FEL+GY D  Y G K+D                      Q+ +ALS+  AEY+A   C  
Sbjct: 254 FELLGYSDSDYAGCKVDRKSTTGTCQFLGRSLVSWSSKKQNSIALSTAEAEYVAAGFCCA 313

Query: 181 QLLWMMHILEDYQFNSKNVPSVL*QCEHY*SNKKNMMRHFRTKHSKSDVKHHFIRDYVAR 360
           QLLWM   L+D+ +N   +P +L   E       N ++H RTKH   D++HHF+RD+  +
Sbjct: 314 QLLWMRQTLKDFGYNFTKIP-LLCDNESVIKIANNPVQHSRTKH--IDIRHHFLRDHETK 370

Query: 361 NDIVLNYIKSKSNIAHIFT 417
            DI L +++++S +  IFT
Sbjct: 371 GDICLTHVRTESQLTDIFT 389


>gb|ABF97883.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1441

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 51/141 (36%), Positives = 78/141 (55%), Gaps = 4/141 (2%)
 Frame = +1

Query: 7    FELVGYYDFHYVGYKLDHXXXXXXXXXXXXXXXXXXX--QHYVALSSIMAEYIAMDECIV 180
            F+LVGY+D  Y G K+D                      Q+ VALS+  AEY++   C  
Sbjct: 1282 FKLVGYFDSDYAGCKVDRKSTSDSCQMLGRSLVSWSSKKQNSVALSTAEAEYVSAGSCCA 1341

Query: 181  QLLWMMHILEDYQFNSKNVPSVL*QCEHY*SNK--KNMMRHFRTKHSKSDVKHHFIRDYV 354
            QLLWM   L DY  +    P +   C++  + K   N ++H RTKH   D++HHF+RD+V
Sbjct: 1342 QLLWMKQTLLDYGISFTKTPLL---CDNDSAIKIANNPVQHSRTKHI--DIRHHFLRDHV 1396

Query: 355  ARNDIVLNYIKSKSNIAHIFT 417
             + DIV+++I++++ +A IFT
Sbjct: 1397 DKCDIVISHIRTENQLADIFT 1417


>emb|CAE05094.3| OSJNBa0009K15.14 [Oryza sativa Japonica Group]
          Length = 845

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 51/141 (36%), Positives = 77/141 (54%), Gaps = 4/141 (2%)
 Frame = +1

Query: 7    FELVGYYDFHYVGYKLDHXXXXXXXXXXXXXXXXXXX--QHYVALSSIMAEYIAMDECIV 180
            F+LVGY D  Y   K+D                      Q++VALS+  AEY++   C  
Sbjct: 686  FKLVGYSDSDYASCKVDRKSTSGSCQMLGRSLVSWSSKKQNFVALSTAEAEYVSAGSCCA 745

Query: 181  QLLWMMHILEDYQFNSKNVPSVL*QCEHY*SNK--KNMMRHFRTKHSKSDVKHHFIRDYV 354
            QLLWM   L DY  +    P +   C++  + K   N ++H RTKH   D++HHF+RD+V
Sbjct: 746  QLLWMKQTLLDYGISFTKTPLL---CDNDSAIKIANNPVQHSRTKHI--DIRHHFLRDHV 800

Query: 355  ARNDIVLNYIKSKSNIAHIFT 417
            A+ DIV+++I+++  +A IFT
Sbjct: 801  AKCDIVISHIRTEDQLAEIFT 821


>gb|AEJ07931.1| Opie3 pol protein [Zea mays subsp. mexicana]
          Length = 1048

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 51/140 (36%), Positives = 73/140 (52%), Gaps = 2/140 (1%)
 Frame = +1

Query: 4    TFELVGYYDFHYVGYKLDHXXXXXXXXXXXXXXXXXXX--QHYVALSSIMAEYIAMDECI 177
            TF+LVGY D  Y G K+D                      Q  VALS+  AEY+A  +C 
Sbjct: 888  TFDLVGYSDSDYAGCKVDRKSTSGTCQFLGRSLVSWNSKKQTSVALSTAEAEYVAAGQCC 947

Query: 178  VQLLWMMHILEDYQFNSKNVPSVL*QCEHY*SNKKNMMRHFRTKHSKSDVKHHFIRDYVA 357
             QLLWM   L D+ +N   VP +L   E      +N + H RTKH   D++HHF+RD+  
Sbjct: 948  AQLLWMRQTLRDFGYNLSKVP-LLCDNESAIRMAENPVEHSRTKH--IDIRHHFLRDHQQ 1004

Query: 358  RNDIVLNYIKSKSNIAHIFT 417
            + DI + ++ +++ +A IFT
Sbjct: 1005 KGDIEVFHVSTENQLADIFT 1024