BLASTX nr result
ID: Zingiber25_contig00040743
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00040743
(329 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006852722.1| hypothetical protein AMTR_s00033p00066570 [A... 58 2e-13
gb|EMJ25514.1| hypothetical protein PRUPE_ppa020250mg [Prunus pe... 59 4e-13
ref|NP_567881.1| RNA Lariat debranching enzyme [Arabidopsis thal... 55 8e-13
emb|CAA19746.1| RNA lariat debranching enzyme - like protein [Ar... 55 8e-13
ref|XP_004242903.1| PREDICTED: lariat debranching enzyme-like [S... 57 1e-12
ref|XP_003559480.1| PREDICTED: lariat debranching enzyme-like [B... 57 1e-12
ref|XP_006344543.1| PREDICTED: lariat debranching enzyme-like is... 57 1e-12
ref|XP_002867279.1| hypothetical protein ARALYDRAFT_913289 [Arab... 55 1e-12
ref|XP_002515390.1| RNA lariat debranching enzyme, putative [Ric... 53 3e-12
ref|XP_006412556.1| hypothetical protein EUTSA_v10025305mg [Eutr... 54 3e-12
ref|XP_006483726.1| PREDICTED: lariat debranching enzyme-like [C... 56 5e-12
gb|ADE77945.1| unknown [Picea sitchensis] 57 5e-12
ref|XP_004501789.1| PREDICTED: lariat debranching enzyme-like [C... 55 8e-12
ref|XP_003603275.1| Lariat debranching enzyme [Medicago truncatu... 53 8e-12
ref|XP_006651765.1| PREDICTED: lariat debranching enzyme-like [O... 57 8e-12
dbj|BAJ98084.1| predicted protein [Hordeum vulgare subsp. vulgare] 52 1e-11
ref|XP_006578109.1| PREDICTED: lariat debranching enzyme-like [G... 56 1e-11
ref|NP_001151946.1| LOC100285583 [Zea mays] gi|195651279|gb|ACG4... 55 1e-11
dbj|BAJ87455.1| predicted protein [Hordeum vulgare subsp. vulgare] 52 1e-11
gb|EOY29302.1| Debranching enzyme 1 isoform 1 [Theobroma cacao] 51 2e-11
>ref|XP_006852722.1| hypothetical protein AMTR_s00033p00066570 [Amborella trichopoda]
gi|548856336|gb|ERN14189.1| hypothetical protein
AMTR_s00033p00066570 [Amborella trichopoda]
Length = 483
Score = 58.2 bits (139), Expect(2) = 2e-13
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = -3
Query: 327 LGSMPAAELLSQLKPQYWFSSHLHFKFSAVVKSKEDG 217
LGS PAAELL +LKP YWFS HLH KF A+V+ EDG
Sbjct: 275 LGSKPAAELLEKLKPAYWFSGHLHCKFPAIVQHGEDG 311
Score = 42.7 bits (99), Expect(2) = 2e-13
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = -1
Query: 218 DGSVTKFLTLDKCLPGRSFLQVFSTSQSSLALAGRLMKKWAFFLL---PEATLTKEISHL 48
DG +TKFL LDKCLPGR FLQ+ + ++W L P LT++ + L
Sbjct: 310 DGPITKFLALDKCLPGRKFLQIIEIESNPGPFEIHYDEEWLAITLKYNPLLPLTRKSAQL 369
>gb|EMJ25514.1| hypothetical protein PRUPE_ppa020250mg [Prunus persica]
Length = 422
Score = 58.9 bits (141), Expect(2) = 4e-13
Identities = 26/41 (63%), Positives = 33/41 (80%)
Frame = -3
Query: 327 LGSMPAAELLSQLKPQYWFSSHLHFKFSAVVKSKEDGWFCN 205
LGS PAA+LL +LKP YWFS+HLH KF+A+V+ +EDG N
Sbjct: 205 LGSKPAAQLLEKLKPPYWFSAHLHCKFAALVQHEEDGSVTN 245
Score = 40.8 bits (94), Expect(2) = 4e-13
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = -1
Query: 218 DGSVTKFLTLDKCLPGRSFLQV 153
DGSVT FL LDKC PGR FLQV
Sbjct: 240 DGSVTNFLALDKCQPGRKFLQV 261
>ref|NP_567881.1| RNA Lariat debranching enzyme [Arabidopsis thaliana]
gi|75250263|sp|Q94K01.1|DBR1_ARATH RecName: Full=Lariat
debranching enzyme; Short=AtDBR1
gi|13877597|gb|AAK43876.1|AF370499_1 RNA lariat
debranching enzyme - like protein [Arabidopsis thaliana]
gi|114213511|gb|ABI54338.1| At4g31770 [Arabidopsis
thaliana] gi|332660555|gb|AEE85955.1| RNA Lariat
debranching enzyme [Arabidopsis thaliana]
Length = 418
Score = 55.5 bits (132), Expect(2) = 8e-13
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = -3
Query: 327 LGSMPAAELLSQLKPQYWFSSHLHFKFSAVVKSKEDG 217
LGS PAA LL +LKPQYWFS+HLH KF+A V+ DG
Sbjct: 205 LGSKPAALLLEKLKPQYWFSAHLHCKFAAAVQHGNDG 241
Score = 43.5 bits (101), Expect(2) = 8e-13
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -1
Query: 218 DGSVTKFLTLDKCLPGRSFLQV 153
DGSVTKFL LDKCLPG+ FLQ+
Sbjct: 240 DGSVTKFLALDKCLPGKKFLQI 261
>emb|CAA19746.1| RNA lariat debranching enzyme - like protein [Arabidopsis thaliana]
gi|7270080|emb|CAB79895.1| RNA lariat debranching
enzyme-like protein [Arabidopsis thaliana]
Length = 401
Score = 55.5 bits (132), Expect(2) = 8e-13
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = -3
Query: 327 LGSMPAAELLSQLKPQYWFSSHLHFKFSAVVKSKEDG 217
LGS PAA LL +LKPQYWFS+HLH KF+A V+ DG
Sbjct: 205 LGSKPAALLLEKLKPQYWFSAHLHCKFAAAVQHGNDG 241
Score = 43.5 bits (101), Expect(2) = 8e-13
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -1
Query: 218 DGSVTKFLTLDKCLPGRSFLQV 153
DGSVTKFL LDKCLPG+ FLQ+
Sbjct: 240 DGSVTKFLALDKCLPGKKFLQI 261
>ref|XP_004242903.1| PREDICTED: lariat debranching enzyme-like [Solanum lycopersicum]
Length = 418
Score = 57.4 bits (137), Expect(2) = 1e-12
Identities = 24/37 (64%), Positives = 32/37 (86%)
Frame = -3
Query: 327 LGSMPAAELLSQLKPQYWFSSHLHFKFSAVVKSKEDG 217
LGS PAAELL +L+P YWFS+HLH KF+A+V+ ++DG
Sbjct: 205 LGSKPAAELLGKLRPSYWFSAHLHCKFAALVQHEKDG 241
Score = 41.2 bits (95), Expect(2) = 1e-12
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = -1
Query: 218 DGSVTKFLTLDKCLPGRSFLQV 153
DG TKFL LDKCLPGR+FLQV
Sbjct: 240 DGHSTKFLALDKCLPGRNFLQV 261
>ref|XP_003559480.1| PREDICTED: lariat debranching enzyme-like [Brachypodium distachyon]
Length = 406
Score = 56.6 bits (135), Expect(2) = 1e-12
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = -3
Query: 327 LGSMPAAELLSQLKPQYWFSSHLHFKFSAVVKSKEDG 217
LGS PAA+LL++LKP YWFS+HLH KF A+++ EDG
Sbjct: 205 LGSEPAAKLLNKLKPPYWFSAHLHCKFPAIIQHGEDG 241
Score = 42.0 bits (97), Expect(2) = 1e-12
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = -1
Query: 218 DGSVTKFLTLDKCLPGRSFLQV 153
DG TKFL LDKCLPGR+FLQV
Sbjct: 240 DGPTTKFLALDKCLPGRNFLQV 261
>ref|XP_006344543.1| PREDICTED: lariat debranching enzyme-like isoform X1 [Solanum
tuberosum] gi|565355330|ref|XP_006344544.1| PREDICTED:
lariat debranching enzyme-like isoform X2 [Solanum
tuberosum]
Length = 418
Score = 57.0 bits (136), Expect(2) = 1e-12
Identities = 24/37 (64%), Positives = 32/37 (86%)
Frame = -3
Query: 327 LGSMPAAELLSQLKPQYWFSSHLHFKFSAVVKSKEDG 217
LGS PAAELL +L+P YWFS+HLH KF+A+V+ ++DG
Sbjct: 205 LGSKPAAELLGKLRPPYWFSAHLHCKFAALVQHEKDG 241
Score = 41.2 bits (95), Expect(2) = 1e-12
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = -1
Query: 218 DGSVTKFLTLDKCLPGRSFLQV 153
DG TKFL LDKCLPGR+FLQV
Sbjct: 240 DGHSTKFLALDKCLPGRNFLQV 261
>ref|XP_002867279.1| hypothetical protein ARALYDRAFT_913289 [Arabidopsis lyrata subsp.
lyrata] gi|297313115|gb|EFH43538.1| hypothetical protein
ARALYDRAFT_913289 [Arabidopsis lyrata subsp. lyrata]
Length = 418
Score = 54.7 bits (130), Expect(2) = 1e-12
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = -3
Query: 327 LGSMPAAELLSQLKPQYWFSSHLHFKFSAVVKSKEDG 217
LGS PAA LL +LKP+YWFS+HLH KF+A V+ +DG
Sbjct: 205 LGSKPAALLLEKLKPRYWFSAHLHCKFAAAVQHGDDG 241
Score = 43.5 bits (101), Expect(2) = 1e-12
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -1
Query: 218 DGSVTKFLTLDKCLPGRSFLQV 153
DGSVTKFL LDKCLPG+ FLQ+
Sbjct: 240 DGSVTKFLALDKCLPGKKFLQI 261
>ref|XP_002515390.1| RNA lariat debranching enzyme, putative [Ricinus communis]
gi|223545334|gb|EEF46839.1| RNA lariat debranching
enzyme, putative [Ricinus communis]
Length = 760
Score = 53.1 bits (126), Expect(2) = 3e-12
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = -3
Query: 327 LGSMPAAELLSQLKPQYWFSSHLHFKFSAVVKSKEDG 217
LGS AA+LL +L+P YWFS+HLH KF+A+V+ EDG
Sbjct: 205 LGSKAAAQLLEKLRPPYWFSAHLHCKFAALVQHGEDG 241
Score = 43.9 bits (102), Expect(2) = 3e-12
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = -1
Query: 218 DGSVTKFLTLDKCLPGRSFLQVF 150
DG VTKFL LDKCLPG+ FLQ+F
Sbjct: 240 DGPVTKFLALDKCLPGKKFLQIF 262
>ref|XP_006412556.1| hypothetical protein EUTSA_v10025305mg [Eutrema salsugineum]
gi|557113726|gb|ESQ54009.1| hypothetical protein
EUTSA_v10025305mg [Eutrema salsugineum]
Length = 420
Score = 53.5 bits (127), Expect(2) = 3e-12
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = -3
Query: 327 LGSMPAAELLSQLKPQYWFSSHLHFKFSAVVKSKEDG 217
LGS PAA LL +LKP+YWFS+HLH KF+A V+ DG
Sbjct: 205 LGSKPAALLLEKLKPRYWFSAHLHCKFAAAVQHGTDG 241
Score = 43.5 bits (101), Expect(2) = 3e-12
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -1
Query: 218 DGSVTKFLTLDKCLPGRSFLQV 153
DGSVTKFL LDKCLPG+ FLQ+
Sbjct: 240 DGSVTKFLALDKCLPGKKFLQI 261
>ref|XP_006483726.1| PREDICTED: lariat debranching enzyme-like [Citrus sinensis]
Length = 714
Score = 56.2 bits (134), Expect(2) = 5e-12
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = -3
Query: 327 LGSMPAAELLSQLKPQYWFSSHLHFKFSAVVKSKED 220
LGS PAA+LL +LKP YWFS+HLH KF+AVV+ ED
Sbjct: 205 LGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGED 240
Score = 40.0 bits (92), Expect(2) = 5e-12
Identities = 18/23 (78%), Positives = 18/23 (78%)
Frame = -1
Query: 218 DGSVTKFLTLDKCLPGRSFLQVF 150
D VTKFL LDKCLP R FLQVF
Sbjct: 240 DSPVTKFLALDKCLPRRKFLQVF 262
>gb|ADE77945.1| unknown [Picea sitchensis]
Length = 434
Score = 56.6 bits (135), Expect(2) = 5e-12
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = -3
Query: 327 LGSMPAAELLSQLKPQYWFSSHLHFKFSAVVKSKEDG 217
LGS PA ELL +LKP YWFS+HLH KF+AVV+ E+G
Sbjct: 205 LGSQPAEELLKKLKPSYWFSAHLHTKFAAVVQHGENG 241
Score = 39.7 bits (91), Expect(2) = 5e-12
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = -1
Query: 218 DGSVTKFLTLDKCLPGRSFLQVFSTSQSSLALAGRLMKKW 99
+G +TKFL LDKCLPG +FLQV + R ++W
Sbjct: 240 NGPITKFLALDKCLPGHNFLQVIEIESDAGPHEIRYDEEW 279
>ref|XP_004501789.1| PREDICTED: lariat debranching enzyme-like [Cicer arietinum]
Length = 778
Score = 54.7 bits (130), Expect(2) = 8e-12
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = -3
Query: 327 LGSMPAAELLSQLKPQYWFSSHLHFKFSAVVKSKEDG 217
LGS AAELL +LKPQYWFS+HLH KF+A+V+ E G
Sbjct: 205 LGSPAAAELLEKLKPQYWFSAHLHCKFAALVQHGEGG 241
Score = 40.8 bits (94), Expect(2) = 8e-12
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -1
Query: 215 GSVTKFLTLDKCLPGRSFLQV 153
G VTKFL LDKCLPGR FLQV
Sbjct: 241 GPVTKFLALDKCLPGRDFLQV 261
>ref|XP_003603275.1| Lariat debranching enzyme [Medicago truncatula]
gi|355492323|gb|AES73526.1| Lariat debranching enzyme
[Medicago truncatula]
Length = 412
Score = 52.8 bits (125), Expect(2) = 8e-12
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = -3
Query: 327 LGSMPAAELLSQLKPQYWFSSHLHFKFSAVVKSKEDG 217
LGS AA+LL +LKPQYWFS+HLH +F+A+V+ E G
Sbjct: 205 LGSKAAAQLLEKLKPQYWFSAHLHCRFAALVQHGEGG 241
Score = 42.7 bits (99), Expect(2) = 8e-12
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = -1
Query: 215 GSVTKFLTLDKCLPGRSFLQVFSTSQSSLALAGRLMKKWAFFLLPEATLTKEISHLFQIP 36
G VTKFL LDKCLPGR FLQV + ++W +T+ ++++F +
Sbjct: 241 GPVTKFLALDKCLPGRDFLQVVEIESEPGPYEIQYDEEW-------LAITRNLNYVFPLT 293
Query: 35 P 33
P
Sbjct: 294 P 294
>ref|XP_006651765.1| PREDICTED: lariat debranching enzyme-like [Oryza brachyantha]
Length = 409
Score = 57.0 bits (136), Expect(2) = 8e-12
Identities = 25/37 (67%), Positives = 31/37 (83%)
Frame = -3
Query: 327 LGSMPAAELLSQLKPQYWFSSHLHFKFSAVVKSKEDG 217
LGS PAA+LL++LKP YWFS+HLH KF AV++ EDG
Sbjct: 212 LGSEPAAKLLNKLKPPYWFSAHLHCKFPAVIQHGEDG 248
Score = 38.5 bits (88), Expect(2) = 8e-12
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = -1
Query: 218 DGSVTKFLTLDKCLPGRSFLQV 153
DG TKFL LDKCLP R FLQV
Sbjct: 247 DGPTTKFLALDKCLPWRGFLQV 268
>dbj|BAJ98084.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 52.4 bits (124), Expect(2) = 1e-11
Identities = 22/37 (59%), Positives = 30/37 (81%)
Frame = -3
Query: 327 LGSMPAAELLSQLKPQYWFSSHLHFKFSAVVKSKEDG 217
LGS AA+LL++LKP YWFS+HLH +F A+++ EDG
Sbjct: 238 LGSESAAKLLNKLKPPYWFSAHLHCRFPAIIQHGEDG 274
Score = 42.4 bits (98), Expect(2) = 1e-11
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -1
Query: 218 DGSVTKFLTLDKCLPGRSFLQV 153
DG +TKFL LDKCLPGR+FLQV
Sbjct: 273 DGPMTKFLALDKCLPGRNFLQV 294
>ref|XP_006578109.1| PREDICTED: lariat debranching enzyme-like [Glycine max]
Length = 423
Score = 56.2 bits (134), Expect(2) = 1e-11
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = -3
Query: 327 LGSMPAAELLSQLKPQYWFSSHLHFKFSAVVKSKEDG 217
LGS PAAELL +LKP YWFS+HLH KF+A+V+ E G
Sbjct: 205 LGSKPAAELLEKLKPHYWFSAHLHCKFAALVQHGEGG 241
Score = 38.5 bits (88), Expect(2) = 1e-11
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = -1
Query: 215 GSVTKFLTLDKCLPGRSFLQV 153
G +TKFL LDKC+PGR FLQ+
Sbjct: 241 GPLTKFLALDKCIPGRDFLQI 261
>ref|NP_001151946.1| LOC100285583 [Zea mays] gi|195651279|gb|ACG45107.1| lariat
debranching enzyme [Zea mays]
gi|413933205|gb|AFW67756.1| lariat debranching enzyme
[Zea mays]
Length = 407
Score = 55.5 bits (132), Expect(2) = 1e-11
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = -3
Query: 327 LGSMPAAELLSQLKPQYWFSSHLHFKFSAVVKSKEDG 217
LGS PAAELL++LKP YWFS+HLH KF AV++ ++G
Sbjct: 205 LGSKPAAELLNKLKPPYWFSAHLHCKFPAVIQHGKNG 241
Score = 39.3 bits (90), Expect(2) = 1e-11
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -1
Query: 218 DGSVTKFLTLDKCLPGRSFLQV 153
+G TKFL LDKC+PGR+FLQV
Sbjct: 240 NGPTTKFLALDKCIPGRNFLQV 261
>dbj|BAJ87455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 328
Score = 52.4 bits (124), Expect(2) = 1e-11
Identities = 22/37 (59%), Positives = 30/37 (81%)
Frame = -3
Query: 327 LGSMPAAELLSQLKPQYWFSSHLHFKFSAVVKSKEDG 217
LGS AA+LL++LKP YWFS+HLH +F A+++ EDG
Sbjct: 126 LGSESAAKLLNKLKPPYWFSAHLHCRFPAIIQHGEDG 162
Score = 42.4 bits (98), Expect(2) = 1e-11
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -1
Query: 218 DGSVTKFLTLDKCLPGRSFLQV 153
DG +TKFL LDKCLPGR+FLQV
Sbjct: 161 DGPMTKFLALDKCLPGRNFLQV 182
>gb|EOY29302.1| Debranching enzyme 1 isoform 1 [Theobroma cacao]
Length = 414
Score = 51.2 bits (121), Expect(2) = 2e-11
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = -3
Query: 327 LGSMPAAELLSQLKPQYWFSSHLHFKFSAVVKSKEDG 217
LGS AA+LL +LKP YWFS+HLH KF+A+V+ + G
Sbjct: 205 LGSKAAAQLLEKLKPSYWFSAHLHCKFAALVQHESGG 241
Score = 43.1 bits (100), Expect(2) = 2e-11
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = -1
Query: 215 GSVTKFLTLDKCLPGRSFLQVFSTSQSSLALAGRLMKKW 99
GSVTKFL LDKCLPGR+FLQ+ R ++W
Sbjct: 241 GSVTKFLALDKCLPGRNFLQIVDIESDPGPYEVRYDEEW 279