BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00040663
         (780 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT03145.1| hypothetical protein F775_09877 [Aegilops tauschii]    153   7e-35
gb|EMS55454.1| hypothetical protein TRIUR3_05046 [Triticum urartu]    152   2e-34
ref|XP_003562027.1| PREDICTED: pentatricopeptide repeat-containi...   144   4e-32
ref|XP_004985565.1| PREDICTED: pentatricopeptide repeat-containi...   141   3e-31
gb|EEC74592.1| hypothetical protein OsI_10174 [Oryza sativa Indi...   140   5e-31
gb|EEE58395.1| hypothetical protein OsJ_09560 [Oryza sativa Japo...   137   4e-30
ref|NP_001049090.1| Os03g0168400 [Oryza sativa Japonica Group] g...   137   4e-30
ref|XP_006651076.1| PREDICTED: pentatricopeptide repeat-containi...   132   1e-28
emb|CBI22241.3| unnamed protein product [Vitis vinifera]              113   8e-23
ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containi...   113   8e-23
ref|XP_006482624.1| PREDICTED: pentatricopeptide repeat-containi...   107   3e-21
ref|XP_006431198.1| hypothetical protein CICLE_v10013587mg, part...   106   1e-20
ref|XP_004306132.1| PREDICTED: pentatricopeptide repeat-containi...   100   6e-19
ref|XP_004163793.1| PREDICTED: pentatricopeptide repeat-containi...   100   6e-19
ref|XP_004139757.1| PREDICTED: pentatricopeptide repeat-containi...   100   6e-19
ref|XP_002323869.2| pentatricopeptide repeat-containing family p...    94   7e-17
ref|XP_006400048.1| hypothetical protein EUTSA_v10012473mg [Eutr...    89   1e-15
ref|XP_002533116.1| pentatricopeptide repeat-containing protein,...    89   2e-15
ref|XP_004233926.1| PREDICTED: pentatricopeptide repeat-containi...    86   2e-14
ref|NP_197032.1| pentatricopeptide repeat-containing protein [Ar...    82   2e-13

>gb|EMT03145.1| hypothetical protein F775_09877 [Aegilops tauschii]
          Length = 1507

 Score =  153 bits (386), Expect = 7e-35
 Identities = 82/181 (45%), Positives = 108/181 (59%)
 Frame = -2

Query: 545 EVELGPILHIGIGKSVLSRCSFLWAKKTDTFVEESSLQDILKVYGDLAPERTRRFWRASE 366
           +V L   L  GIGK ++S+CSF++    DTF    SL+D+LK+   L+PE  RRFWRAS 
Sbjct: 91  DVHLAAKLGPGIGKLIVSKCSFIFDTGRDTFEGNCSLRDVLKLGLWLSPETLRRFWRASW 150

Query: 365 LSPADFLEILLGFGDGDLSLRQVDFLWKLFRWAERQTPGFNHLPRSYEAMVLVLTGAHKY 186
           L P DFL+IL+GFG G   +R   FLW L+RWA  Q+  F HLPRS + MV +L  AH  
Sbjct: 151 LRPEDFLDILIGFGQGAAEVRNARFLWNLYRWASWQSKDFRHLPRSNDIMVSILADAHML 210

Query: 185 EDXXXXXXXXXSNEIWFNSVPLFSIIIQGYAEYGKSEKSLALFDKVRERGIIPSPSTYKA 6
                       N    ++  LFS I Q Y+E G  +KS+ALFD+ R + +IPS S Y+ 
Sbjct: 211 SQAESLLLLLDDNRALTDASRLFSQITQMYSEAGHLDKSVALFDRARSKCLIPSASCYQV 270

Query: 5   L 3
           L
Sbjct: 271 L 271


>gb|EMS55454.1| hypothetical protein TRIUR3_05046 [Triticum urartu]
          Length = 1172

 Score =  152 bits (383), Expect = 2e-34
 Identities = 80/179 (44%), Positives = 108/179 (60%)
 Frame = -2

Query: 539 ELGPILHIGIGKSVLSRCSFLWAKKTDTFVEESSLQDILKVYGDLAPERTRRFWRASELS 360
           +LGP    GIGK ++S+CSF++    DTF    SL+D+LK+   L+PE  RRFWRAS L 
Sbjct: 97  KLGP----GIGKLIVSKCSFIFDTGRDTFEGNCSLRDVLKLGLWLSPETLRRFWRASRLR 152

Query: 359 PADFLEILLGFGDGDLSLRQVDFLWKLFRWAERQTPGFNHLPRSYEAMVLVLTGAHKYED 180
           P DFL+IL+GFG G   +R   FLW ++RWA  Q+  F HLPRS + MV +L  AH    
Sbjct: 153 PEDFLDILIGFGPGAAEVRNARFLWNMYRWASWQSKDFRHLPRSNDIMVSILADAHMLNQ 212

Query: 179 XXXXXXXXXSNEIWFNSVPLFSIIIQGYAEYGKSEKSLALFDKVRERGIIPSPSTYKAL 3
                     N    ++  LFS I Q Y+E G  +KS+ALFD+ R + ++PS S Y+ L
Sbjct: 213 AESLLLLLDDNRALTDASRLFSQITQMYSEAGHLDKSVALFDRARSKCLVPSASCYQVL 271


>ref|XP_003562027.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15280-like, partial [Brachypodium distachyon]
          Length = 1278

 Score =  144 bits (362), Expect = 4e-32
 Identities = 75/171 (43%), Positives = 101/171 (59%)
 Frame = -2

Query: 515 GIGKSVLSRCSFLWAKKTDTFVEESSLQDILKVYGDLAPERTRRFWRASELSPADFLEIL 336
           GIG+ ++++CS ++    DTF    SL D+LK    L+PE  RRFWRAS L P DF +IL
Sbjct: 93  GIGELIIAKCSSIFESGRDTFEGNCSLHDLLKPGLWLSPETLRRFWRASTLKPEDFFDIL 152

Query: 335 LGFGDGDLSLRQVDFLWKLFRWAERQTPGFNHLPRSYEAMVLVLTGAHKYEDXXXXXXXX 156
           +GFG G   +R+  FLW L+RWA  Q+  F HLPRS + MV +L  A  +          
Sbjct: 153 IGFGQGAAEIRKARFLWNLYRWASWQSKDFRHLPRSNDLMVSILAYAQMFNQAESLLLLL 212

Query: 155 XSNEIWFNSVPLFSIIIQGYAEYGKSEKSLALFDKVRERGIIPSPSTYKAL 3
             N+   N+  LFS I Q Y+E G  +KS+ALFD  R + +IPS S Y+ L
Sbjct: 213 DDNKALTNAGGLFSQITQAYSETGHLDKSVALFDHARYKCLIPSASCYQVL 263


>ref|XP_004985565.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15280-like isoform X1 [Setaria italica]
           gi|514821779|ref|XP_004985566.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g15280-like isoform X2 [Setaria italica]
           gi|514821781|ref|XP_004985567.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g15280-like isoform X3 [Setaria italica]
           gi|514821783|ref|XP_004985568.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g15280-like isoform X4 [Setaria italica]
           gi|514821785|ref|XP_004985569.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g15280-like isoform X5 [Setaria italica]
          Length = 1259

 Score =  141 bits (355), Expect = 3e-31
 Identities = 78/171 (45%), Positives = 100/171 (58%)
 Frame = -2

Query: 515 GIGKSVLSRCSFLWAKKTDTFVEESSLQDILKVYGDLAPERTRRFWRASELSPADFLEIL 336
           GIG  V+++CS ++  + D F  + SLQD+LK    L+PE  RRFWR SEL P DFL+IL
Sbjct: 89  GIGSLVIAKCSHIFESRGDNFDGKCSLQDVLKPGLWLSPETLRRFWRVSELKPEDFLDIL 148

Query: 335 LGFGDGDLSLRQVDFLWKLFRWAERQTPGFNHLPRSYEAMVLVLTGAHKYEDXXXXXXXX 156
           +GFG     +R   FLW L+RWA +Q+  F HLPRS E MV VL  AH            
Sbjct: 149 IGFGSSAAQVRNARFLWNLYRWASQQSKEFQHLPRSNETMVSVLADAHMLSQAESLLLSL 208

Query: 155 XSNEIWFNSVPLFSIIIQGYAEYGKSEKSLALFDKVRERGIIPSPSTYKAL 3
             +     S  LFS IIQ Y+E    EKS+AL+D  R + +IPS S Y+ L
Sbjct: 209 DDHMGLPVSSELFSRIIQVYSEANNLEKSVALYDYARCKRLIPSVSCYQLL 259


>gb|EEC74592.1| hypothetical protein OsI_10174 [Oryza sativa Indica Group]
          Length = 1276

 Score =  140 bits (353), Expect = 5e-31
 Identities = 73/171 (42%), Positives = 100/171 (58%)
 Frame = -2

Query: 515 GIGKSVLSRCSFLWAKKTDTFVEESSLQDILKVYGDLAPERTRRFWRASELSPADFLEIL 336
           GI K V+ +CS+++  K   F     LQD+LK+   L+PE  R FWRASEL P DFL IL
Sbjct: 103 GIVKLVIDKCSYIFKSKGGIFDGNCRLQDVLKLGFWLSPETLRPFWRASELKPDDFLNIL 162

Query: 335 LGFGDGDLSLRQVDFLWKLFRWAERQTPGFNHLPRSYEAMVLVLTGAHKYEDXXXXXXXX 156
           +GFG     +++  FLW L+RWA  Q+  F HLPRS E MV +L  AH            
Sbjct: 163 IGFGPDAAEVKKAIFLWNLYRWASWQSKAFQHLPRSNEIMVSILANAHMLSQAESLLLLL 222

Query: 155 XSNEIWFNSVPLFSIIIQGYAEYGKSEKSLALFDKVRERGIIPSPSTYKAL 3
             N +  ++  LFS +IQ YAE G   KS++++D  ++R +IPS S Y+ L
Sbjct: 223 DGNRVLADAGKLFSQVIQAYAEAGNLGKSISIYDCAQDRCLIPSGSCYQVL 273


>gb|EEE58395.1| hypothetical protein OsJ_09560 [Oryza sativa Japonica Group]
          Length = 1276

 Score =  137 bits (345), Expect = 4e-30
 Identities = 72/171 (42%), Positives = 99/171 (57%)
 Frame = -2

Query: 515 GIGKSVLSRCSFLWAKKTDTFVEESSLQDILKVYGDLAPERTRRFWRASELSPADFLEIL 336
           GI K V+ +CS+++  K   F     LQD+LK+   L+PE  R FWRASEL P DFL IL
Sbjct: 103 GIVKLVIDKCSYIFKSKGGIFDGNCRLQDVLKLGFWLSPETLRPFWRASELKPDDFLNIL 162

Query: 335 LGFGDGDLSLRQVDFLWKLFRWAERQTPGFNHLPRSYEAMVLVLTGAHKYEDXXXXXXXX 156
           +GFG     +++  FLW L+ WA  Q+  F HLPRS E MV +L  AH            
Sbjct: 163 IGFGPDAAEVKKAIFLWNLYWWASWQSKAFQHLPRSNEIMVSILANAHMLSQAESLLLLL 222

Query: 155 XSNEIWFNSVPLFSIIIQGYAEYGKSEKSLALFDKVRERGIIPSPSTYKAL 3
             N +  ++  LFS +IQ YAE G   KS++++D  ++R +IPS S Y+ L
Sbjct: 223 DGNRVLADAGKLFSQVIQAYAEAGNLGKSISIYDCAQDRCLIPSGSCYQVL 273


>ref|NP_001049090.1| Os03g0168400 [Oryza sativa Japonica Group]
           gi|19071617|gb|AAL84284.1|AC073556_1 putative
           pentatricopeptide repeat containing protein [Oryza
           sativa Japonica Group] gi|108706387|gb|ABF94182.1|
           pentatricopeptide, putative [Oryza sativa Japonica
           Group] gi|113547561|dbj|BAF11004.1| Os03g0168400 [Oryza
           sativa Japonica Group]
          Length = 1337

 Score =  137 bits (345), Expect = 4e-30
 Identities = 72/171 (42%), Positives = 99/171 (57%)
 Frame = -2

Query: 515 GIGKSVLSRCSFLWAKKTDTFVEESSLQDILKVYGDLAPERTRRFWRASELSPADFLEIL 336
           GI K V+ +CS+++  K   F     LQD+LK+   L+PE  R FWRASEL P DFL IL
Sbjct: 96  GIVKLVIDKCSYIFKSKGGIFDGNCRLQDVLKLGFWLSPETLRPFWRASELKPDDFLNIL 155

Query: 335 LGFGDGDLSLRQVDFLWKLFRWAERQTPGFNHLPRSYEAMVLVLTGAHKYEDXXXXXXXX 156
           +GFG     +++  FLW L+ WA  Q+  F HLPRS E MV +L  AH            
Sbjct: 156 IGFGPDAAEVKKAIFLWNLYWWASWQSKAFQHLPRSNEIMVSILANAHMLSQAESLLLLL 215

Query: 155 XSNEIWFNSVPLFSIIIQGYAEYGKSEKSLALFDKVRERGIIPSPSTYKAL 3
             N +  ++  LFS +IQ YAE G   KS++++D  ++R +IPS S Y+ L
Sbjct: 216 DGNRVLADAGKLFSQVIQAYAEAGNLGKSISIYDCAQDRCLIPSGSCYQVL 266


>ref|XP_006651076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15280-like [Oryza brachyantha]
          Length = 1249

 Score =  132 bits (332), Expect = 1e-28
 Identities = 73/172 (42%), Positives = 98/172 (56%), Gaps = 1/172 (0%)
 Frame = -2

Query: 515 GIGKSVLSRCSFLWAKKTD-TFVEESSLQDILKVYGDLAPERTRRFWRASELSPADFLEI 339
           GI K V+ +CS+++  K   TF     LQD+LK+   L+PE  R FWRASEL P DF  I
Sbjct: 82  GIVKLVIDKCSYIFHSKGGITFDGNCILQDVLKLGFWLSPETLRPFWRASELKPDDFFNI 141

Query: 338 LLGFGDGDLSLRQVDFLWKLFRWAERQTPGFNHLPRSYEAMVLVLTGAHKYEDXXXXXXX 159
           L+GFG     +++  FLWKL++WA  Q+  F HLPRS E MV +L  +            
Sbjct: 142 LIGFGPDAAEVKKARFLWKLYQWASWQSKAFQHLPRSNEIMVSILADSQMLSQAESLLLL 201

Query: 158 XXSNEIWFNSVPLFSIIIQGYAEYGKSEKSLALFDKVRERGIIPSPSTYKAL 3
              N    +S  LFS +IQ YAE G   KS++L+D  R + +IPS S Y+ L
Sbjct: 202 LDDNRALVDSNILFSQVIQAYAEVGNLGKSMSLYDCARHKCLIPSASCYQVL 253


>emb|CBI22241.3| unnamed protein product [Vitis vinifera]
          Length = 1256

 Score =  113 bits (282), Expect = 8e-23
 Identities = 66/184 (35%), Positives = 101/184 (54%), Gaps = 4/184 (2%)
 Frame = -2

Query: 542 VELGPILHIGIGKSVLSRCSFLWAKKTDTFVEESSLQDILKVYGDLAPERTRRFWRASEL 363
           V+L  I    I KSV+ RCS LW   +      SSL++ L    D++PE TR+F R SEL
Sbjct: 61  VDLSAIDCSRIVKSVILRCSHLWETNSVKPFGYSSLKEHLLGISDISPETTRKFRRVSEL 120

Query: 362 SPADFLEILLGF----GDGDLSLRQVDFLWKLFRWAERQTPGFNHLPRSYEAMVLVLTGA 195
            P D LEILLGF     +  +   +V+ LW +F+W+  Q  GF HLP+S E M  +L   
Sbjct: 121 KPEDVLEILLGFQFHRENPQIESGKVESLWGIFKWSNDQNKGFKHLPQSCEIMASMLIRV 180

Query: 194 HKYEDXXXXXXXXXSNEIWFNSVPLFSIIIQGYAEYGKSEKSLALFDKVRERGIIPSPST 15
               +         S  +  +   +FS +++GY    +SE++++++D++R RG++PS S 
Sbjct: 181 GLLREVESLLAEMESRGVLLDGHEIFSNLVEGYVCVSESERAISVYDQMRGRGLVPSLSC 240

Query: 14  YKAL 3
           Y  L
Sbjct: 241 YNVL 244


>ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15280-like [Vitis vinifera]
          Length = 1273

 Score =  113 bits (282), Expect = 8e-23
 Identities = 66/184 (35%), Positives = 101/184 (54%), Gaps = 4/184 (2%)
 Frame = -2

Query: 542 VELGPILHIGIGKSVLSRCSFLWAKKTDTFVEESSLQDILKVYGDLAPERTRRFWRASEL 363
           V+L  I    I KSV+ RCS LW   +      SSL++ L    D++PE TR+F R SEL
Sbjct: 78  VDLSAIDCSRIVKSVILRCSHLWETNSVKPFGYSSLKEHLLGISDISPETTRKFRRVSEL 137

Query: 362 SPADFLEILLGF----GDGDLSLRQVDFLWKLFRWAERQTPGFNHLPRSYEAMVLVLTGA 195
            P D LEILLGF     +  +   +V+ LW +F+W+  Q  GF HLP+S E M  +L   
Sbjct: 138 KPEDVLEILLGFQFHRENPQIESGKVESLWGIFKWSNDQNKGFKHLPQSCEIMASMLIRV 197

Query: 194 HKYEDXXXXXXXXXSNEIWFNSVPLFSIIIQGYAEYGKSEKSLALFDKVRERGIIPSPST 15
               +         S  +  +   +FS +++GY    +SE++++++D++R RG++PS S 
Sbjct: 198 GLLREVESLLAEMESRGVLLDGHEIFSNLVEGYVCVSESERAISVYDQMRGRGLVPSLSC 257

Query: 14  YKAL 3
           Y  L
Sbjct: 258 YNVL 261


>ref|XP_006482624.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15280-like [Citrus sinensis]
          Length = 1259

 Score =  107 bits (268), Expect = 3e-21
 Identities = 73/233 (31%), Positives = 114/233 (48%), Gaps = 14/233 (6%)
 Frame = -2

Query: 665 RPPRKCHQV-----WLS-----YPFSTCCASKPRSIPSPNAANSVRSGSGEVELGPILHI 516
           R PRK H++     +LS     +       ++P+S  S +    + +    ++L  +   
Sbjct: 24  RNPRKLHKIKQVRSFLSTEQHIFTSDIVLKNRPKSSLSSSEDQEMET---HIDLSSVSFD 80

Query: 515 GIGKSVLSRCSFLWAKKTDTFVEESSLQDILKVYGDLAPERTRRFWRASELSPADFLEIL 336
           GI KS LSR S L   + D     +SL+D+L    D+ P   R+F R   L P + LEIL
Sbjct: 81  GIAKSGLSRSSHLLETEKDKSYANASLKDLLLNISDVVPATARKFLRFLVLKPENVLEIL 140

Query: 335 LGF----GDGDLSLRQVDFLWKLFRWAERQTPGFNHLPRSYEAMVLVLTGAHKYEDXXXX 168
           +GF            +V+ LW++F+WA +   GF HLPRS E M L+L      ++    
Sbjct: 141 VGFWFECEKVGFRNEKVETLWEIFKWASKLYKGFRHLPRSCEVMALMLIRVGMLKEVELL 200

Query: 167 XXXXXSNEIWFNSVPLFSIIIQGYAEYGKSEKSLALFDKVRERGIIPSPSTYK 9
                   I   S  +FS +IQGY   G  E+++ +FD++R RG++P  S Y+
Sbjct: 201 LLAMEREGILLKSNEIFSNLIQGYVGVGDVERAVLVFDQMRGRGLVPFLSCYR 253


>ref|XP_006431198.1| hypothetical protein CICLE_v10013587mg, partial [Citrus clementina]
           gi|557533255|gb|ESR44438.1| hypothetical protein
           CICLE_v10013587mg, partial [Citrus clementina]
          Length = 1231

 Score =  106 bits (264), Expect = 1e-20
 Identities = 63/182 (34%), Positives = 94/182 (51%), Gaps = 4/182 (2%)
 Frame = -2

Query: 542 VELGPILHIGIGKSVLSRCSFLWAKKTDTFVEESSLQDILKVYGDLAPERTRRFWRASEL 363
           ++L  +   GI KS LSR S L   +       +SL+D+L    D+ P   R+F R   L
Sbjct: 41  IDLSSVSFDGIAKSGLSRSSHLLETEKGKSYANASLKDLLLNISDVVPATARKFLRFLVL 100

Query: 362 SPADFLEILLGFG----DGDLSLRQVDFLWKLFRWAERQTPGFNHLPRSYEAMVLVLTGA 195
            P + LEIL+GF            +V+ LW++F+W  +Q  GF HLPRS E M L+L  A
Sbjct: 101 KPENVLEILVGFWFECEKVGFRPEKVETLWEIFKWGSKQYKGFRHLPRSCEVMALMLIRA 160

Query: 194 HKYEDXXXXXXXXXSNEIWFNSVPLFSIIIQGYAEYGKSEKSLALFDKVRERGIIPSPST 15
              ++            I   S  +FS +IQGY   G  E+++ +FD++R RG++P  S 
Sbjct: 161 GMLKEVELLLLAMEREGILLKSNEIFSNLIQGYVGVGDVERAVLVFDQMRGRGLVPFLSC 220

Query: 14  YK 9
           Y+
Sbjct: 221 YR 222


>ref|XP_004306132.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15280-like [Fragaria vesca subsp. vesca]
          Length = 1246

 Score =  100 bits (249), Expect = 6e-19
 Identities = 60/186 (32%), Positives = 95/186 (51%), Gaps = 4/186 (2%)
 Frame = -2

Query: 569 NSVRSGSGEVELGPILHIGIGKSVLSRCSFLWAKKTDTFVEESSLQDILKVYGDLAPERT 390
           +S  S + +V+  P    GI +SV+ RC   + K        +SL+D+L     L P+ T
Sbjct: 39  SSSSSSTTQVDSSPNCFKGIAQSVILRCPQYFDKSKVQNFANASLKDLLLEISGLVPQLT 98

Query: 389 RRFWRASELSPADFLEILLGF----GDGDLSLRQVDFLWKLFRWAERQTPGFNHLPRSYE 222
           RR  R SE  P D LE+LLGF    G      R+V+ LW +F+W   +  GF H PRS E
Sbjct: 99  RRLRRVSEPKPEDVLELLLGFELQCGKVGFDARKVESLWGVFKWVSEKVEGFKHKPRSCE 158

Query: 221 AMVLVLTGAHKYEDXXXXXXXXXSNEIWFNSVPLFSIIIQGYAEYGKSEKSLALFDKVRE 42
            M  +L       +         S  +   S  ++S +I+GY   G+ ++++A++D++R 
Sbjct: 159 VMASMLVRVGLIREVDVLLSTMESQGVLLGSGEIYSDLIEGYVGVGELDRAIAVYDRIRG 218

Query: 41  RGIIPS 24
           R ++PS
Sbjct: 219 R-VVPS 223


>ref|XP_004163793.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15280-like [Cucumis sativus]
          Length = 1225

 Score =  100 bits (249), Expect = 6e-19
 Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 5/202 (2%)
 Frame = -2

Query: 593 SIPSPNAANSVRSGSGEVELGPILHIGIGKSVLSRCS-FLWAKKTDTFVEESSLQDILKV 417
           S+ SP      R+    + L  I   G+ +SV+SRCS FL  +   + +   SL D L  
Sbjct: 32  SVQSPGVLRC-RNKCTTINLSSIDCSGLAQSVISRCSLFLENEGNGSALPNPSLIDFLLE 90

Query: 416 YGDLAPERTRRFWRASELSPADFLEILLGF----GDGDLSLRQVDFLWKLFRWAERQTPG 249
             D+ PE  RR  R  EL P D L++ + F    G   + +++V+ LW++F++A   +  
Sbjct: 91  ISDVVPEYARRIRRIPELKPEDVLKLFIEFQSEVGKNGIQVKKVECLWRIFKFANESSGN 150

Query: 248 FNHLPRSYEAMVLVLTGAHKYEDXXXXXXXXXSNEIWFNSVPLFSIIIQGYAEYGKSEKS 69
           F HLPRS E M  +L    K+++         S  I  ++  +FS +IQG    G  E++
Sbjct: 151 FKHLPRSCEIMASLLVRVGKFKEVEHFLSEMESQGILLDNPEVFSCLIQGLVCEGNLERA 210

Query: 68  LALFDKVRERGIIPSPSTYKAL 3
           + +++KVR R   PS S Y AL
Sbjct: 211 VLIYEKVRRRCNSPSLSCYHAL 232


>ref|XP_004139757.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15280-like [Cucumis sativus]
          Length = 1246

 Score =  100 bits (249), Expect = 6e-19
 Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 5/202 (2%)
 Frame = -2

Query: 593 SIPSPNAANSVRSGSGEVELGPILHIGIGKSVLSRCS-FLWAKKTDTFVEESSLQDILKV 417
           S+ SP      R+    + L  I   G+ +SV+SRCS FL  +   + +   SL D L  
Sbjct: 32  SVQSPGVLRC-RNKCTTINLSSIDCSGLAQSVISRCSLFLENEGNGSALPNPSLIDFLLE 90

Query: 416 YGDLAPERTRRFWRASELSPADFLEILLGF----GDGDLSLRQVDFLWKLFRWAERQTPG 249
             D+ PE  RR  R  EL P D L++ + F    G   + +++V+ LW++F++A   +  
Sbjct: 91  ISDVVPEYARRIRRIPELKPEDVLKLFIEFQSEVGKNGIQVKKVECLWRIFKFANESSGN 150

Query: 248 FNHLPRSYEAMVLVLTGAHKYEDXXXXXXXXXSNEIWFNSVPLFSIIIQGYAEYGKSEKS 69
           F HLPRS E M  +L    K+++         S  I  ++  +FS +IQG    G  E++
Sbjct: 151 FKHLPRSCEIMASLLVRVGKFKEVEHFLSEMESQGILLDNPEVFSCLIQGLVCEGNLERA 210

Query: 68  LALFDKVRERGIIPSPSTYKAL 3
           + +++KVR R   PS S Y AL
Sbjct: 211 VLIYEKVRRRCNSPSLSCYHAL 232


>ref|XP_002323869.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550320105|gb|EEF04002.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 1255

 Score = 93.6 bits (231), Expect = 7e-17
 Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 7/178 (3%)
 Frame = -2

Query: 515 GIGKSVLSRCSFLWAKKTD---TFVEESSLQDILKVYGDLAPERTRRFWRASELSPADFL 345
           GI  SV+S+CS  + KK      F+ ++S +  L    D+ P  TRRF R   L P D L
Sbjct: 67  GIAHSVISKCSHFFDKKEPKRRNFLYDASFKMPLLDISDVIPHVTRRFLRVLRLKPEDVL 126

Query: 344 EILLGFGDG----DLSLRQVDFLWKLFRWAERQTPGFNHLPRSYEAMVLVLTGAHKYEDX 177
           E+LLGF        +   +V+ LW++F+ A  Q  GF H P+S E M  +L     + + 
Sbjct: 127 EMLLGFQFECERVAVKSTKVESLWEIFKCANEQDKGFRHFPKSCEVMASILVRHGMFREA 186

Query: 176 XXXXXXXXSNEIWFNSVPLFSIIIQGYAEYGKSEKSLALFDKVRERGIIPSPSTYKAL 3
                      I  +S  +F  +I+GY   G  E+++ ++D++R+R ++PS    +AL
Sbjct: 187 QLLLLAMERQGISMDSSKIFVSLIEGYVGVGDLERAVLVYDQMRDRDLVPSLLCCRAL 244


>ref|XP_006400048.1| hypothetical protein EUTSA_v10012473mg [Eutrema salsugineum]
           gi|557101138|gb|ESQ41501.1| hypothetical protein
           EUTSA_v10012473mg [Eutrema salsugineum]
          Length = 1222

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 60/171 (35%), Positives = 86/171 (50%), Gaps = 4/171 (2%)
 Frame = -2

Query: 503 SVLSRCSFLWAKKTDTFVEESSLQDILKVYGDLAPERTRRFWRASELSPADFLEILLGFG 324
           +V S  S L A   +  V  S L+D+L    D+ P  TRRF R   L P + LE+LLGF 
Sbjct: 54  NVSSSFSLLSAAAENRGVTGSLLKDLLLDLSDVVPTITRRFRRFPGLKPENVLELLLGFQ 113

Query: 323 D----GDLSLRQVDFLWKLFRWAERQTPGFNHLPRSYEAMVLVLTGAHKYEDXXXXXXXX 156
                G +  R+V  LW++FRWA  Q  GF HLP + E M  +L      +D        
Sbjct: 114 SELQRGGVEGRKVRPLWEIFRWASGQYKGFKHLPLACEIMASMLIMEGMVKDVELLLLEM 173

Query: 155 XSNEIWFNSVPLFSIIIQGYAEYGKSEKSLALFDKVRERGIIPSPSTYKAL 3
            +N     +  +F  +IQ Y +   S K++ LFD +R +G++P  S Y+ L
Sbjct: 174 DNNGDTLYNEGVFCELIQKYVDDFNSRKAVMLFDWMRRKGLVPLNSCYQTL 224


>ref|XP_002533116.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527079|gb|EEF29261.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1204

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 4/144 (2%)
 Frame = -2

Query: 422 KVYGDLAPERTRRFWRASELSPADFLEILLGFG----DGDLSLRQVDFLWKLFRWAERQT 255
           K   D+ P+ TRRF R   L P D LEILLGF        +   +V+ LW +F+W   Q 
Sbjct: 39  KDISDVIPDLTRRFSRILRLRPEDVLEILLGFQFQCEQVAIKSSKVESLWGIFKWVSDQD 98

Query: 254 PGFNHLPRSYEAMVLVLTGAHKYEDXXXXXXXXXSNEIWFNSVPLFSIIIQGYAEYGKSE 75
            GF HLP+S+E M L+LT    + +            I  ++  +FS +I+ Y     SE
Sbjct: 99  KGFKHLPKSFEVMALLLTRCGMFREVQLLLLAMERQGISLDNNEIFSKLIERYVSSCDSE 158

Query: 74  KSLALFDKVRERGIIPSPSTYKAL 3
           +++ ++D+++E+ ++PS   Y  L
Sbjct: 159 RAVLMYDRMQEQNLVPSLFCYHGL 182


>ref|XP_004233926.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15280-like [Solanum lycopersicum]
          Length = 1237

 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 41/149 (27%), Positives = 84/149 (56%), Gaps = 4/149 (2%)
 Frame = -2

Query: 437 LQDILKVYGDLAPERTRRFWRASELSPADFLEILLGF----GDGDLSLRQVDFLWKLFRW 270
           ++D L    +++P   RR+WR S L+P D LEILLGF    G  D+ +++++ LW ++ W
Sbjct: 79  IKDCLLKLSEISPATVRRYWRVSVLNPNDVLEILLGFQNDSGAFDVEIKKIESLWGIYMW 138

Query: 269 AERQTPGFNHLPRSYEAMVLVLTGAHKYEDXXXXXXXXXSNEIWFNSVPLFSIIIQGYAE 90
           A +Q+  F HL ++ E +  +L  +  +++         +   + ++  ++S +I+ +  
Sbjct: 139 ASKQSKSFRHLIKASEIIATMLVRSGLFKEVECLVSLLDTQGTFLDNHEIYSNLIEVFVG 198

Query: 89  YGKSEKSLALFDKVRERGIIPSPSTYKAL 3
             + E ++  +D++R RG+ PS S Y+ +
Sbjct: 199 DYRLENAIGCYDRMRMRGVSPSISCYRVI 227


>ref|NP_197032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180846|sp|Q9LXF4.1|PP384_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g15280 gi|7671497|emb|CAB89338.1| putative protein
           [Arabidopsis thaliana] gi|332004760|gb|AED92143.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 1227

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
 Frame = -2

Query: 443 SSLQDILKVYGDLAPERTRRFWRASELSPADFLEILLGFGD----GDLSLRQVDFLWKLF 276
           SSL+D+L    D+ P  TRRF R   L P D LE+ LGF      G +   +V  LW++F
Sbjct: 74  SSLKDLLFDLSDVVPNITRRFRRFPGLKPEDVLELSLGFESELQRGGIGNIKVQALWEIF 133

Query: 275 RWAERQTPGFNHLPRSYEAMVLVLTGAHKYEDXXXXXXXXXSNEIWFNSVPLFSIIIQGY 96
           RWA  Q  GF HLP++ E M  +L      ++          +     +  +F  +I  Y
Sbjct: 134 RWASVQYQGFKHLPQACEIMASMLIREGMVKEVELLLMEMERHGDTMVNEGIFCDLIGKY 193

Query: 95  AEYGKSEKSLALFDKVRERGIIPSPSTYKAL 3
            +   S K++ LFD +R +G++P  S Y+ L
Sbjct: 194 VDDFDSRKAVMLFDWMRRKGLVPLTSCYQIL 224