BLASTX nr result
ID: Zingiber25_contig00040574
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00040574
(730 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera] 181 2e-43
ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containi... 179 1e-42
gb|EOX91054.1| Tetratricopeptide repeat (TPR)-like superfamily p... 173 5e-41
ref|XP_006425654.1| hypothetical protein CICLE_v10025166mg [Citr... 168 1e-39
ref|XP_003516564.2| PREDICTED: pentatricopeptide repeat-containi... 167 4e-39
gb|ESW28957.1| hypothetical protein PHAVU_002G032000g [Phaseolus... 167 4e-39
ref|XP_003612041.1| Pentatricopeptide repeat-containing protein ... 166 9e-39
ref|XP_002521565.1| pentatricopeptide repeat-containing protein,... 164 4e-38
gb|EXB59105.1| hypothetical protein L484_014600 [Morus notabilis] 158 2e-36
ref|XP_002866756.1| pentatricopeptide repeat-containing protein ... 155 2e-35
ref|XP_006393847.1| hypothetical protein EUTSA_v10005524mg [Eutr... 153 6e-35
ref|NP_201453.1| pentatricopeptide repeat-containing protein [Ar... 150 4e-34
gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum] 147 3e-33
ref|XP_006281646.1| hypothetical protein CARUB_v10027776mg [Caps... 142 1e-31
ref|XP_006395538.1| hypothetical protein EUTSA_v10004197mg [Eutr... 141 2e-31
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi... 135 1e-29
ref|XP_006417732.1| hypothetical protein EUTSA_v10006910mg [Eutr... 134 4e-29
gb|AEP33757.1| organelle transcript processing 82, partial [Aeth... 133 7e-29
ref|XP_002526196.1| pentatricopeptide repeat-containing protein,... 133 7e-29
ref|XP_006468953.1| PREDICTED: pentatricopeptide repeat-containi... 132 9e-29
>emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 181 bits (459), Expect = 2e-43
Identities = 96/219 (43%), Positives = 136/219 (62%), Gaps = 1/219 (0%)
Frame = +1
Query: 58 EGLKPIRGDMIKIGLVHDADPTARPLDGLGLTSNAGSLAHSPLVFERIPHRDAFAWNAMI 237
E L+ I G M+K GL+ D P ++ L + N+GSLA++ VF+RI + F WN MI
Sbjct: 32 EELRQIHGQMLKTGLILDEIPASKLL-AFCASPNSGSLAYARTVFDRIFRPNTFMWNTMI 90
Query: 238 RALSHSRNPEKALLLYCQMPFEPRMLNSYTFPFLLKACVA-SPSADTRQVHCHVVKHGFA 414
R S+S+ PE+ALLLY M + N+YTFPFLLKAC + S S +T+Q+H H++K GF
Sbjct: 91 RGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFG 150
Query: 415 AEVHTENALLHTYARSGXXXXXXXXXXXXXXXXXXTWNSMIDGYARSGRLNSARQLFDLM 594
+E++T N+LL+ Y++SG +WNSMIDGY + G + A ++F+ M
Sbjct: 151 SEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHM 210
Query: 595 PNRNVVSWTTMIATYVERCLYKEALELFRAMQLSEIKPD 711
P RN++SWT+MI+ V KEAL LF MQ + IK D
Sbjct: 211 PERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLD 249
Score = 58.2 bits (139), Expect = 3e-06
Identities = 46/198 (23%), Positives = 81/198 (40%), Gaps = 6/198 (3%)
Frame = +1
Query: 154 SNAGSLAHSPLVFERIPHRDAFAWNAMIRALSHSRNPEKALLLYCQMPFEPRMLNSYTFP 333
+ G + + +F +P R+ +W +MI + P++AL L+ +M L++
Sbjct: 195 TKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALV 254
Query: 334 FLLKACVASPSADT-RQVHCHVVKHGFAAEVHTENALLHTYARSGXXXXXXXXXXXXXXX 510
L+AC D + +H ++ KH + L+ YA+ G
Sbjct: 255 STLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEK 314
Query: 511 XXXTWNSMIDGYARSGRLNSARQLFDLMPNR----NVVSWTTMIATYVERCLYKEALELF 678
W +MI GYA GR A + F M N +++T ++ L EA LF
Sbjct: 315 GVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLF 374
Query: 679 RAMQ-LSEIKPDVKVLTC 729
+M+ + KP ++ C
Sbjct: 375 ESMERIHGFKPSIEHYGC 392
>ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 179 bits (453), Expect = 1e-42
Identities = 95/219 (43%), Positives = 135/219 (61%), Gaps = 1/219 (0%)
Frame = +1
Query: 58 EGLKPIRGDMIKIGLVHDADPTARPLDGLGLTSNAGSLAHSPLVFERIPHRDAFAWNAMI 237
E L+ I G M+K GL+ D P ++ L + N+GSLA++ VF+RI + F WN MI
Sbjct: 32 EELRQIHGQMLKTGLILDEIPASKLL-AFCASPNSGSLAYARTVFDRIFRPNTFMWNTMI 90
Query: 238 RALSHSRNPEKALLLYCQMPFEPRMLNSYTFPFLLKACVA-SPSADTRQVHCHVVKHGFA 414
R S+S+ PE+ALLLY M + N+YTFPFLLKAC + S +T+Q+H H++K GF
Sbjct: 91 RGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFG 150
Query: 415 AEVHTENALLHTYARSGXXXXXXXXXXXXXXXXXXTWNSMIDGYARSGRLNSARQLFDLM 594
+E++T N+LL+ Y++SG +WNSMIDGY + G + A ++F+ M
Sbjct: 151 SEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHM 210
Query: 595 PNRNVVSWTTMIATYVERCLYKEALELFRAMQLSEIKPD 711
P RN++SWT+MI+ V KEAL LF MQ + IK D
Sbjct: 211 PERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLD 249
Score = 58.2 bits (139), Expect = 3e-06
Identities = 46/198 (23%), Positives = 81/198 (40%), Gaps = 6/198 (3%)
Frame = +1
Query: 154 SNAGSLAHSPLVFERIPHRDAFAWNAMIRALSHSRNPEKALLLYCQMPFEPRMLNSYTFP 333
+ G + + +F +P R+ +W +MI + P++AL L+ +M L++
Sbjct: 195 TKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALV 254
Query: 334 FLLKACVASPSADT-RQVHCHVVKHGFAAEVHTENALLHTYARSGXXXXXXXXXXXXXXX 510
L+AC D + +H ++ KH + L+ YA+ G
Sbjct: 255 STLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEK 314
Query: 511 XXXTWNSMIDGYARSGRLNSARQLFDLMPNR----NVVSWTTMIATYVERCLYKEALELF 678
W +MI GYA GR A + F M N +++T ++ L EA LF
Sbjct: 315 GVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLF 374
Query: 679 RAMQ-LSEIKPDVKVLTC 729
+M+ + KP ++ C
Sbjct: 375 ESMERIHGFKPSIEHYGC 392
>gb|EOX91054.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 529
Score = 173 bits (439), Expect = 5e-41
Identities = 95/219 (43%), Positives = 128/219 (58%), Gaps = 1/219 (0%)
Frame = +1
Query: 58 EGLKPIRGDMIKIGLVHDADPTARPLDGLGLTSNAGSLAHSPLVFERIPHRDAFAWNAMI 237
E LK I M K GLV D +R L ++ G+L ++ +VF+R+ + F +N MI
Sbjct: 32 EELKQIHAQMFKTGLVADTITVSRILT-FCVSPKYGNLEYAQMVFDRVSRPNTFMYNTMI 90
Query: 238 RALSHSRNPEKALLLYCQMPFEPRMLNSYTFPFLLKACVASPSAD-TRQVHCHVVKHGFA 414
R S+++ PEKA LLY QM NSYTFPFLLKAC + + + T+Q+H HV+K GF
Sbjct: 91 RGYSNNKEPEKAFLLYQQMLCHSVPHNSYTFPFLLKACSSLLAIEETKQIHAHVIKLGFG 150
Query: 415 AEVHTENALLHTYARSGXXXXXXXXXXXXXXXXXXTWNSMIDGYARSGRLNSARQLFDLM 594
+EV N+LLH YA SG +WNSMI Y + G++ A + F M
Sbjct: 151 SEVFATNSLLHVYATSGSIKAARLLFDLVPERDIVSWNSMIGCYTKCGKMEIAYEFFKDM 210
Query: 595 PNRNVVSWTTMIATYVERCLYKEALELFRAMQLSEIKPD 711
P +NV+SWTTMI+ YV +YKEAL LF MQ+ +KPD
Sbjct: 211 PTKNVISWTTMISGYVGAGMYKEALNLFHEMQIEGVKPD 249
>ref|XP_006425654.1| hypothetical protein CICLE_v10025166mg [Citrus clementina]
gi|568824869|ref|XP_006466814.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g66520-like [Citrus sinensis]
gi|557527644|gb|ESR38894.1| hypothetical protein
CICLE_v10025166mg [Citrus clementina]
Length = 622
Score = 168 bits (426), Expect = 1e-39
Identities = 95/219 (43%), Positives = 126/219 (57%), Gaps = 1/219 (0%)
Frame = +1
Query: 58 EGLKPIRGDMIKIGLVHDADPTARPLDGLGLTSNAGSLAHSPLVFERIPHRDAFAWNAMI 237
E LK I M K GL + +R L SN+GSLA++ +VF+RI + F WN M+
Sbjct: 32 EELKQIHAQMFKKGLTVNTILVSRLL-AFCTFSNSGSLAYAQMVFDRIIKPNTFMWNTMV 90
Query: 238 RALSHSRNPEKALLLYCQMPFEPRMLNSYTFPFLLKACV-ASPSADTRQVHCHVVKHGFA 414
R + S PE+ALLLY QM N+YTFPFLLKAC S +T+Q+H ++K GF+
Sbjct: 91 RGYADSSEPEQALLLYRQMLSHSVSHNAYTFPFLLKACSRLSALEETQQIHAQIIKFGFS 150
Query: 415 AEVHTENALLHTYARSGXXXXXXXXXXXXXXXXXXTWNSMIDGYARSGRLNSARQLFDLM 594
+EV N+LLH YA SG +WNSMIDGY + G + A + F M
Sbjct: 151 SEVFATNSLLHAYAISGSIKSARLIFDHMPQRDTVSWNSMIDGYTKCGEMELACEFFKDM 210
Query: 595 PNRNVVSWTTMIATYVERCLYKEALELFRAMQLSEIKPD 711
+NV+SWTT+I+ YV + KEAL LF MQ + +KPD
Sbjct: 211 KEKNVISWTTLISGYVGAGMDKEALHLFHEMQTAGVKPD 249
Score = 58.2 bits (139), Expect = 3e-06
Identities = 56/229 (24%), Positives = 90/229 (39%), Gaps = 6/229 (2%)
Frame = +1
Query: 58 EGLKPIRGDMIKIGLVHDADPTARPLDGLGLTSNAGSLAHSPLVFERIPHRDAFAWNAMI 237
E + I +IK G + T L ++ GS+ + L+F+ +P RD +WN+MI
Sbjct: 135 EETQQIHAQIIKFGFSSEVFATNSLLHAYAIS---GSIKSARLIFDHMPQRDTVSWNSMI 191
Query: 238 RALSHSRNPEKALLLYCQMPFEPRMLNSYTFPFLLKACVASPSADTRQVHCHV------V 399
+ E A C+ + + N ++ L+ V + D +H V
Sbjct: 192 DGYTKCGEMELA----CEFFKDMKEKNVISWTTLISGYVGA-GMDKEALHLFHEMQTAGV 246
Query: 400 KHGFAAEVHTENALLHTYARSGXXXXXXXXXXXXXXXXXXTWNSMIDGYARSGRLNSARQ 579
K A V +A H A ++ID YA+ G L A +
Sbjct: 247 KPDNVALVSAVSACAHLGALDQGRWIDEYIKHLGIKIDPILGCALIDMYAKCGDLEEALE 306
Query: 580 LFDLMPNRNVVSWTTMIATYVERCLYKEALELFRAMQLSEIKPDVKVLT 726
LF M + V +WT +I +EAL F MQ++ KP++ T
Sbjct: 307 LFKRMEKKGVSAWTAIIFGLAIHGHGREALNWFSKMQVARTKPNLVTFT 355
>ref|XP_003516564.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 580
Score = 167 bits (422), Expect = 4e-39
Identities = 98/248 (39%), Positives = 138/248 (55%), Gaps = 8/248 (3%)
Frame = +1
Query: 10 MAGLLLPPS-------IVAVASPEGLKPIRGDMIKIGLVHDADPTARPLDGLGLTSNAGS 168
MA LLLPP+ + ++ + L I G ++K G + + + L +
Sbjct: 65 MAVLLLPPNTEQTQALLERCSNMKELMQIHGQLLKKGTIRNQLTVSTLLVSYARIELV-N 123
Query: 169 LAHSPLVFERIPHRDAFAWNAMIRALSHSRNPEKALLLYCQMPFEPRMLNSYTFPFLLKA 348
LA++ +VF+ I + WN M+RA S+S +PE ALLLY QM NSYTFPFLLKA
Sbjct: 124 LAYTRVVFDSISSPNTVIWNTMLRAYSNSNDPEAALLLYHQMLHNSVPHNSYTFPFLLKA 183
Query: 349 CVA-SPSADTRQVHCHVVKHGFAAEVHTENALLHTYARSGXXXXXXXXXXXXXXXXXXTW 525
C A S +T+Q+H H++K GF EV+ N+LL YA SG +W
Sbjct: 184 CSALSAFEETQQIHAHIIKRGFGLEVYATNSLLRVYAISGNIQSAHVLFNQLPTRDIVSW 243
Query: 526 NSMIDGYARSGRLNSARQLFDLMPNRNVVSWTTMIATYVERCLYKEALELFRAMQLSEIK 705
N MIDGY + G L+ A ++F MP +NV+SWTTMI +V ++KEAL L + M ++ IK
Sbjct: 244 NIMIDGYIKFGNLDMAYKIFQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQQMLVAGIK 303
Query: 706 PDVKVLTC 729
PD L+C
Sbjct: 304 PDSITLSC 311
>gb|ESW28957.1| hypothetical protein PHAVU_002G032000g [Phaseolus vulgaris]
Length = 518
Score = 167 bits (422), Expect = 4e-39
Identities = 89/190 (46%), Positives = 118/190 (62%), Gaps = 1/190 (0%)
Frame = +1
Query: 163 GSLAHSPLVFERIPHRDAFAWNAMIRALSHSRNPEKALLLYCQMPFEPRMLNSYTFPFLL 342
G+LA++ +VF+RI + WNAMIRA S+S +PE ALLLY QM NSYTFPFLL
Sbjct: 56 GNLAYTRMVFDRISLPNTVIWNAMIRAYSNSNDPEAALLLYHQMLHNSVPHNSYTFPFLL 115
Query: 343 KACVA-SPSADTRQVHCHVVKHGFAAEVHTENALLHTYARSGXXXXXXXXXXXXXXXXXX 519
KAC A S +T Q+H H++K GF +EV+ N+LL YA SG
Sbjct: 116 KACSALSAFEETMQLHAHIIKMGFGSEVYAANSLLRAYAISGNIHSAHVLFNQLPSPDVV 175
Query: 520 TWNSMIDGYARSGRLNSARQLFDLMPNRNVVSWTTMIATYVERCLYKEALELFRAMQLSE 699
+WN+MIDGY + G ++ A ++F MP +NV+SWTTMI V ++KEAL L R M ++
Sbjct: 176 SWNTMIDGYTKFGNVDMAYKIFQAMPAKNVISWTTMIVGGVRAGMHKEALSLLRQMLVAG 235
Query: 700 IKPDVKVLTC 729
IKPD L+C
Sbjct: 236 IKPDSITLSC 245
>ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 518
Score = 166 bits (419), Expect = 9e-39
Identities = 91/223 (40%), Positives = 129/223 (57%), Gaps = 1/223 (0%)
Frame = +1
Query: 64 LKPIRGDMIKIGLVHDADPTARPLDGLGLTSNAGSLAHSPLVFERIPHRDAFAWNAMIRA 243
LK I G ++K G + +R L + +L ++ +VF+RI + WN MIRA
Sbjct: 27 LKQIHGQLLKKGTIRHKLTVSRLLTTYA-SMEFSNLTYARMVFDRISSPNTVMWNTMIRA 85
Query: 244 LSHSRNPEKALLLYCQMPFEPRMLNSYTFPFLLKACVA-SPSADTRQVHCHVVKHGFAAE 420
S+S +PE+ALLLY QM N+YTFPFLLKAC A S A+T Q+H ++K GF +E
Sbjct: 86 YSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETHQIHVQIIKRGFGSE 145
Query: 421 VHTENALLHTYARSGXXXXXXXXXXXXXXXXXXTWNSMIDGYARSGRLNSARQLFDLMPN 600
V+ N+LL YA SG +WN+MIDGY + G + A ++F MP
Sbjct: 146 VYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQAMPE 205
Query: 601 RNVVSWTTMIATYVERCLYKEALELFRAMQLSEIKPDVKVLTC 729
+NV+SWT+MI +V ++KEAL L + M ++ IKPD L+C
Sbjct: 206 KNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSC 248
>ref|XP_002521565.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539243|gb|EEF40836.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 338
Score = 164 bits (414), Expect = 4e-38
Identities = 91/223 (40%), Positives = 131/223 (58%), Gaps = 2/223 (0%)
Frame = +1
Query: 64 LKPIRGDMIKIGLVHDADPTARPLDGLGLTSNAGSLAHSPLVFERIPHR-DAFAWNAMIR 240
LK I M K G V + T L + N+G+L ++ +VF+ + R + + WNAM+R
Sbjct: 26 LKQIHAQMFKTGSVLETI-TISELQAFAASPNSGNLTYAKIVFDSLSSRPNTYIWNAMLR 84
Query: 241 ALSHSRNPEKALLLYCQMPFEPRMLNSYTFPFLLKACVASPSAD-TRQVHCHVVKHGFAA 417
+ S PE+AL+LY QM N YTFPFLLKAC + + + +QVH ++K GF +
Sbjct: 85 GYADSNKPEEALILYHQMLCHSVPHNGYTFPFLLKACSSLSAIEKAQQVHAQIIKLGFGS 144
Query: 418 EVHTENALLHTYARSGXXXXXXXXXXXXXXXXXXTWNSMIDGYARSGRLNSARQLFDLMP 597
+V+T N+LLH YA SG +WNS+IDGY + G +A +LF MP
Sbjct: 145 DVYTTNSLLHAYAASGFIESARIIFDRIPHPDTVSWNSIIDGYVKCGETETAYELFKDMP 204
Query: 598 NRNVVSWTTMIATYVERCLYKEALELFRAMQLSEIKPDVKVLT 726
+N +S+T MI+ +V+ L KEAL+LF+ MQ++ IKPD VLT
Sbjct: 205 EKNAISFTVMISGHVQAGLDKEALDLFQEMQIAGIKPDKIVLT 247
>gb|EXB59105.1| hypothetical protein L484_014600 [Morus notabilis]
Length = 592
Score = 158 bits (399), Expect = 2e-36
Identities = 90/217 (41%), Positives = 125/217 (57%), Gaps = 1/217 (0%)
Frame = +1
Query: 64 LKPIRGDMIKIGLVHDADPTARPLDGLGLTSNAGSLAHSPLVFERIPHRDAFAWNAMIRA 243
L+ I M K GLV D P ++ L L N+G+LA++ ++F+R + F WN MI+
Sbjct: 4 LEQIHAQMFKRGLVSDVIPASKLLSFCVLP-NSGNLAYARMIFDRFSKPNTFMWNTMIKG 62
Query: 244 LSHSRNPEKALLLYCQMPFEPRMLNSYTFPFLLKACVA-SPSADTRQVHCHVVKHGFAAE 420
++S PE+AL LY QM N+YTFP LLKAC S +T+Q+H ++K GF++E
Sbjct: 63 YANSNEPEEALHLYHQMVCHSVPHNNYTFPSLLKACSCLSALKETQQIHACIIKMGFSSE 122
Query: 421 VHTENALLHTYARSGXXXXXXXXXXXXXXXXXXTWNSMIDGYARSGRLNSARQLFDLMPN 600
V+ N+LLH YA + + NSMI+ YA+ G + A LF MP
Sbjct: 123 VYAINSLLHVYAVTDSFHSANLLFNRIPERDIVSTNSMINAYAKCGEMGKANALFRNMPE 182
Query: 601 RNVVSWTTMIATYVERCLYKEALELFRAMQLSEIKPD 711
RNV+SWTTMI +V L KEAL LF MQ++ +KPD
Sbjct: 183 RNVISWTTMIYGFVNAGLDKEALYLFHEMQVAGVKPD 219
>ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297312591|gb|EFH43015.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 649
Score = 155 bits (391), Expect = 2e-35
Identities = 84/231 (36%), Positives = 132/231 (57%), Gaps = 1/231 (0%)
Frame = +1
Query: 22 LLPPSIVAVASPEGLKPIRGDMIKIGLVHDADPTARPLDGLGLTSNAGSLAHSPLVFERI 201
++P + + E LK I M+K GL+ D+ + L ++++ L ++ +VF+
Sbjct: 45 MMPNTETRCSKQEELKQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGF 104
Query: 202 PHRDAFAWNAMIRALSHSRNPEKALLLYCQMPFEPRMLNSYTFPFLLKACV-ASPSADTR 378
D F WN MIR S S PE++LLLY +M N+YTFP LLKAC S +T
Sbjct: 105 DRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETT 164
Query: 379 QVHCHVVKHGFAAEVHTENALLHTYARSGXXXXXXXXXXXXXXXXXXTWNSMIDGYARSG 558
Q+H + K G+ +V+ N+L+++YA +G +WNS+I GYA++G
Sbjct: 165 QIHAQITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAG 224
Query: 559 RLNSARQLFDLMPNRNVVSWTTMIATYVERCLYKEALELFRAMQLSEIKPD 711
+++ A LF M +N +SWTTMI+ YV+ ++KEAL+LF MQ S+++PD
Sbjct: 225 KMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPD 275
>ref|XP_006393847.1| hypothetical protein EUTSA_v10005524mg [Eutrema salsugineum]
gi|557090486|gb|ESQ31133.1| hypothetical protein
EUTSA_v10005524mg [Eutrema salsugineum]
Length = 616
Score = 153 bits (386), Expect = 6e-35
Identities = 90/221 (40%), Positives = 126/221 (57%), Gaps = 3/221 (1%)
Frame = +1
Query: 58 EGLKPIRGDMIKIGLVHDADPTARPLDG-LGLTSNAGSLAHSPLVFERIPHRDAFAWNAM 234
E LK I M+K GL+ D + L L TS++ H VF+ D F WN M
Sbjct: 25 EQLKQIHARMLKSGLLQDPYAITKFLSFCLSSTSSSYYALH---VFQGFDRPDTFLWNLM 81
Query: 235 IRALSHSRNPEKALLLYCQMPFEPRMLNSYTFPFLLKACV-ASPSADTRQVHCHVVKHGF 411
IR S S P+++LLLY +M N+YTFPFLLKAC S +T+Q+H HV K G+
Sbjct: 82 IRGFSCSDQPQRSLLLYYRMLCSSAPHNAYTFPFLLKACSNLSALEETKQIHAHVTKFGY 141
Query: 412 AAEVHTENALLHTYARSGXXXXXXXXXXXXXXXXXXTWNSMIDGYARSGRLNSARQLFDL 591
+V+ N+L+++YA +G +WNS+I GYA+SG ++ A LF
Sbjct: 142 GDDVYAVNSLINSYAVTGNFNLAHLLFDRIKEPDVVSWNSLIKGYAKSGNMDIALTLFRR 201
Query: 592 MP-NRNVVSWTTMIATYVERCLYKEALELFRAMQLSEIKPD 711
MP +N +SWTTMI+ YV+ + KEAL+LF MQ S+++PD
Sbjct: 202 MPEKKNAISWTTMISGYVQAGMNKEALQLFHEMQNSDVEPD 242
>ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g66520 gi|10177533|dbj|BAB10928.1| selenium-binding
protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 150 bits (379), Expect = 4e-34
Identities = 82/219 (37%), Positives = 125/219 (57%), Gaps = 1/219 (0%)
Frame = +1
Query: 58 EGLKPIRGDMIKIGLVHDADPTARPLDGLGLTSNAGSLAHSPLVFERIPHRDAFAWNAMI 237
E LK I M+K GL+ D+ + L ++++ L ++ +VF+ D F WN MI
Sbjct: 28 EELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMI 87
Query: 238 RALSHSRNPEKALLLYCQMPFEPRMLNSYTFPFLLKACV-ASPSADTRQVHCHVVKHGFA 414
R S S PE++LLLY +M N+YTFP LLKAC S +T Q+H + K G+
Sbjct: 88 RGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYE 147
Query: 415 AEVHTENALLHTYARSGXXXXXXXXXXXXXXXXXXTWNSMIDGYARSGRLNSARQLFDLM 594
+V+ N+L+++YA +G +WNS+I GY ++G+++ A LF M
Sbjct: 148 NDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM 207
Query: 595 PNRNVVSWTTMIATYVERCLYKEALELFRAMQLSEIKPD 711
+N +SWTTMI+ YV+ + KEAL+LF MQ S+++PD
Sbjct: 208 AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPD 246
>gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 147 bits (371), Expect = 3e-33
Identities = 86/218 (39%), Positives = 122/218 (55%), Gaps = 2/218 (0%)
Frame = +1
Query: 64 LKPIRGDMIKIGLVHDADPTARPLDGLGLTSNAGSLAHSPLVFERIPHRDAFAWNAMIRA 243
LK I M+K GL+ D + L L+S+ S AH + F D F WN MIR
Sbjct: 27 LKQIHARMLKSGLLQDPYAMTKFLS-FCLSSSFSSYAHD-VFFNGFDRPDTFLWNLMIRG 84
Query: 244 LSHSRNPEKALLLYCQMPFEPRMLNSYTFPFLLKACV-ASPSADTRQVHCHVVKHGFAAE 420
LS S P+++LLLY +M N+YTFPFLLKAC S +T Q+H H+ K G+ +
Sbjct: 85 LSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQIHAHITKFGYGHD 144
Query: 421 VHTENALLHTYARSGXXXXXXXXXXXXXXXXXXTWNSMIDGYARSGRLNSARQLFDLMPN 600
++ N+L+++YA +G +WNS+I GY ++G ++ A LF MP
Sbjct: 145 IYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEMDMALTLFRKMPE 204
Query: 601 RN-VVSWTTMIATYVERCLYKEALELFRAMQLSEIKPD 711
+N +SWTTMI+ YV+ + KEAL+LF MQ S + PD
Sbjct: 205 KNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPD 242
>ref|XP_006281646.1| hypothetical protein CARUB_v10027776mg [Capsella rubella]
gi|482550350|gb|EOA14544.1| hypothetical protein
CARUB_v10027776mg [Capsella rubella]
Length = 621
Score = 142 bits (357), Expect = 1e-31
Identities = 78/217 (35%), Positives = 121/217 (55%), Gaps = 1/217 (0%)
Frame = +1
Query: 64 LKPIRGDMIKIGLVHDADPTARPLDGLGLTSNAGSLAHSPLVFERIPHRDAFAWNAMIRA 243
LK I M+K GL+ + + L ++++ L ++ +VF+ D F WN MI+
Sbjct: 31 LKQIHARMLKTGLMQHSYAVTKFLSFCVSSTSSDFLPYAQIVFDGFDRPDTFLWNLMIKG 90
Query: 244 LSHSRNPEKALLLYCQMPFEPRMLNSYTFPFLLKACV-ASPSADTRQVHCHVVKHGFAAE 420
S S P+ +LLLY +M N+YTFP LLKAC S +T Q+H + K G+ +
Sbjct: 91 FSCSDEPKTSLLLYHRMLCCSAPHNAYTFPSLLKACSNLSAFQETTQIHAQITKLGYEND 150
Query: 421 VHTENALLHTYARSGXXXXXXXXXXXXXXXXXXTWNSMIDGYARSGRLNSARQLFDLMPN 600
V+ N+L+++YA +G +WNS+I GY ++G+++ A LF M
Sbjct: 151 VYAVNSLINSYAVTGNFELAHLLFDRMSKPDAVSWNSVIKGYVKAGKMDIALTLFQKMAE 210
Query: 601 RNVVSWTTMIATYVERCLYKEALELFRAMQLSEIKPD 711
+N +SWTTMI+ YVE + EAL+LF MQ S+++PD
Sbjct: 211 KNAISWTTMISGYVEAGMNNEALQLFHEMQNSDVEPD 247
>ref|XP_006395538.1| hypothetical protein EUTSA_v10004197mg [Eutrema salsugineum]
gi|557092177|gb|ESQ32824.1| hypothetical protein
EUTSA_v10004197mg [Eutrema salsugineum]
Length = 453
Score = 141 bits (356), Expect = 2e-31
Identities = 80/217 (36%), Positives = 119/217 (54%), Gaps = 1/217 (0%)
Frame = +1
Query: 64 LKPIRGDMIKIGLVHDADPTARPLDGLGLTSNAGSLAHSPLVFERIPHRDAFAWNAMIRA 243
LK I +I+ L +D R L + ++S+ G ++ LVF ++ F WN MIR+
Sbjct: 36 LKQIHAKIIRYNLTND-QLLVRQL--ISVSSSLGETRYASLVFSQLQSPSTFTWNLMIRS 92
Query: 244 LSHSRNPEKALLLYCQMPFEPRMLNSYTFPFLLKACVASPSADT-RQVHCHVVKHGFAAE 420
LS + P +ALLL+ M L+ +TFPF++KAC+AS S QVH +K GF ++
Sbjct: 93 LSVNDKPREALLLFILMLSHQSQLDKFTFPFVIKACLASSSLRLGTQVHGLAIKSGFFSD 152
Query: 421 VHTENALLHTYARSGXXXXXXXXXXXXXXXXXXTWNSMIDGYARSGRLNSARQLFDLMPN 600
V +N L+ Y + G +W +M+ G + +L+SA +F+ MP
Sbjct: 153 VFFQNTLMDLYLKCGKPDCGRKVFDKMPGRTIVSWTTMLYGLVSNSQLDSAEIIFNQMPT 212
Query: 601 RNVVSWTTMIATYVERCLYKEALELFRAMQLSEIKPD 711
RNVVSWT MI YV+ C EA +LFR MQ+ E+KP+
Sbjct: 213 RNVVSWTAMITAYVKNCRPDEAFQLFRRMQVDEVKPN 249
Score = 64.3 bits (155), Expect = 4e-08
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 1/190 (0%)
Frame = +1
Query: 145 GLTSNAGSLAHSPLVFERIPHRDAFAWNAMIRALSHSRNPEKALLLYCQMPFEPRMLNSY 324
GL SN+ L + ++F ++P R+ +W AMI A + P++A L+ +M + N +
Sbjct: 193 GLVSNS-QLDSAEIIFNQMPTRNVVSWTAMITAYVKNCRPDEAFQLFRRMQVDEVKPNEF 251
Query: 325 TFPFLLKACVASPSADT-RQVHCHVVKHGFAAEVHTENALLHTYARSGXXXXXXXXXXXX 501
T +L+A S R VH + K+GF + AL+ Y++ G
Sbjct: 252 TIVSMLQASTQLGSLSMGRWVHDYAHKNGFPLDCFLGTALIDMYSKCG------------ 299
Query: 502 XXXXXXTWNSMIDGYARSGRLNSARQLFDLMPNRNVVSWTTMIATYVERCLYKEALELFR 681
L A ++FD M ++++ +W +MI + +EAL+L+
Sbjct: 300 -------------------SLQDAWKVFDAMQSKSLATWNSMITSLGVHGCGEEALDLYD 340
Query: 682 AMQLSEIKPD 711
M+ + ++PD
Sbjct: 341 QMEEAGVEPD 350
>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 135 bits (340), Expect = 1e-29
Identities = 80/216 (37%), Positives = 119/216 (55%), Gaps = 1/216 (0%)
Frame = +1
Query: 67 KPIRGDMIKIGLVHDADPTARPLDGLGLTSNAGSLAHSPLVFERIPHRDAFAWNAMIRAL 246
K I +IK GL H+ L S +G ++++ +F I + F WN+MIR L
Sbjct: 46 KQIHAHIIKTGL-HNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGL 104
Query: 247 SHSRNPEKALLLYCQMPFEPRMLNSYTFPFLLKACVASPSA-DTRQVHCHVVKHGFAAEV 423
S S +P AL+ + +M + NSYTFPFLLK+C SA + +Q+H HV+K GF ++V
Sbjct: 105 SMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDV 164
Query: 424 HTENALLHTYARSGXXXXXXXXXXXXXXXXXXTWNSMIDGYARSGRLNSARQLFDLMPNR 603
+L++ YA+SG ++ ++I GYA G ++ ARQLFD MP +
Sbjct: 165 FIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVK 224
Query: 604 NVVSWTTMIATYVERCLYKEALELFRAMQLSEIKPD 711
+VVSW MIA Y + KEAL LF M+ + + P+
Sbjct: 225 DVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPN 260
Score = 80.1 bits (196), Expect = 7e-13
Identities = 55/183 (30%), Positives = 80/183 (43%), Gaps = 1/183 (0%)
Frame = +1
Query: 163 GSLAHSPLVFERIPHRDAFAWNAMIRALSHSRNPEKALLLYCQMPFEPRMLNSYTFPFLL 342
G + + +F+ +P +D +WNAMI + ++ALLL+ M N T +L
Sbjct: 209 GYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVL 268
Query: 343 KACVASPSADT-RQVHCHVVKHGFAAEVHTENALLHTYARSGXXXXXXXXXXXXXXXXXX 519
AC S + D + + G + + NAL
Sbjct: 269 SACAQSNALDLGNSMRSWIEDRGLCSNLKLVNAL-------------------------- 302
Query: 520 TWNSMIDGYARSGRLNSARQLFDLMPNRNVVSWTTMIATYVERCLYKEALELFRAMQLSE 699
ID Y++ G L +AR+LFD M R+V+SW MI Y C YKEAL LFR M S
Sbjct: 303 -----IDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASG 357
Query: 700 IKP 708
++P
Sbjct: 358 VEP 360
Score = 57.0 bits (136), Expect = 6e-06
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 1/157 (0%)
Frame = +1
Query: 142 LGLTSNAGSLAHSPLVFERIPHRDAFAWNAMIRALSHSRNPEKALLLYCQMPFEPRMLNS 321
+ + S G L + +F+ + RD +WN MI +H + ++AL L+ +M
Sbjct: 303 IDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTE 362
Query: 322 YTFPFLLKACVASPSADT-RQVHCHVVKHGFAAEVHTENALLHTYARSGXXXXXXXXXXX 498
TF +L +C + D + +H ++ K+ + +L+ YA+ G
Sbjct: 363 ITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDG 422
Query: 499 XXXXXXXTWNSMIDGYARSGRLNSARQLFDLMPNRNV 609
+WN+MI G A G+ + A +LF M + +
Sbjct: 423 MKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGI 459
>ref|XP_006417732.1| hypothetical protein EUTSA_v10006910mg [Eutrema salsugineum]
gi|557095503|gb|ESQ36085.1| hypothetical protein
EUTSA_v10006910mg [Eutrema salsugineum]
Length = 740
Score = 134 bits (336), Expect = 4e-29
Identities = 75/219 (34%), Positives = 119/219 (54%), Gaps = 1/219 (0%)
Frame = +1
Query: 58 EGLKPIRGDMIKIGLVHDADPTARPLDGLGLTSNAGSLAHSPLVFERIPHRDAFAWNAMI 237
+ L+ I MIK GL + ++ ++ L+ + L ++ VFE I + WN M+
Sbjct: 46 KSLRKIHAQMIKTGLHNTNYALSKLIELCVLSPHFEGLTYAISVFETIQEPNQLIWNTML 105
Query: 238 RALSHSRNPEKALLLYCQMPFEPRMLNSYTFPFLLKACVASPSA-DTRQVHCHVVKHGFA 414
R + S +P +L LY M + NSYTFPFLLK+C S + + +Q+H HV+K G+
Sbjct: 106 RGHALSSDPVSSLKLYVSMISLGLLPNSYTFPFLLKSCAKSNTLREGQQIHGHVLKFGYG 165
Query: 415 AEVHTENALLHTYARSGXXXXXXXXXXXXXXXXXXTWNSMIDGYARSGRLNSARQLFDLM 594
+++ +L+ YA++G ++ ++I GYA G SA+++FD +
Sbjct: 166 LDLYVHTSLISMYAQNGRLEDAQQVFDRSSHRDVVSYTALITGYASRGYTQSAQKMFDEI 225
Query: 595 PNRNVVSWTTMIATYVERCLYKEALELFRAMQLSEIKPD 711
P+++VVSW MI+ YVE YKEA ELF M S + PD
Sbjct: 226 PDKDVVSWNAMISGYVETGYYKEAFELFEDMMKSNVSPD 264
Score = 74.3 bits (181), Expect = 4e-11
Identities = 57/182 (31%), Positives = 82/182 (45%), Gaps = 2/182 (1%)
Frame = +1
Query: 187 VFERIPHRDAFAWNAMIRALSHSRNPEKALLLYCQMPFEPRMLNSYTFPFLLKACVASPS 366
+F+ IP +D +WNAMI + ++A L+ M + T +L AC S S
Sbjct: 221 MFDEIPDKDVVSWNAMISGYVETGYYKEAFELFEDMMKSNVSPDESTMVTVLSACAQSGS 280
Query: 367 ADT-RQVHCHVVKHGFAAEVHTENALLHTYARSGXXXXXXXXXXXXXXXXXXTWNSMIDG 543
+ RQVH + HGF + + NAL ID
Sbjct: 281 IELGRQVHSWIDDHGFGSNLKIVNAL-------------------------------IDL 309
Query: 544 YARSGRLNSARQLFDLMPNRNVVSWTTMIATYVERCLYKEALELFRAMQLSEIKP-DVKV 720
Y++ G + +A LF+ M ++VVSW T+I Y LYKEAL LF+ M S P DV +
Sbjct: 310 YSKCGEVATACGLFEGMSYKDVVSWNTLIGGYTHMSLYKEALLLFQEMLRSNESPNDVTM 369
Query: 721 LT 726
L+
Sbjct: 370 LS 371
Score = 65.9 bits (159), Expect = 1e-08
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 8/204 (3%)
Frame = +1
Query: 142 LGLTSNAGSLAHSPLVFERIPHRDAFAWNAMIRALSHSRNPEKALLLYCQMPFEPRMLNS 321
+ L S G +A + +FE + ++D +WN +I +H ++ALLL+ +M N
Sbjct: 307 IDLYSKCGEVATACGLFEGMSYKDVVSWNTLIGGYTHMSLYKEALLLFQEMLRSNESPND 366
Query: 322 YTFPFLLKACVASPSADT-RQVHCHVVK--HGFAAEVHTENALLHTYARSGXXXXXXXXX 492
T +L AC + D R +H ++ K G +L+ YA+ G
Sbjct: 367 VTMLSILPACAHLGAIDIGRWIHVYIAKKLKGVTNASSLRTSLIDMYAKCGDIEAAHQVF 426
Query: 493 XXXXXXXXXTWNSMIDGYARSGRLNSARQLFDLMPNRNVVSWTTMIATYVERCLYKEALE 672
+WN+MI G+A GR N+A LF M + + C + L+
Sbjct: 427 NSMLHRSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDGITFVGLLSACSHSGMLD 486
Query: 673 L----FRAM-QLSEIKPDVKVLTC 729
L FR+M Q I P ++ C
Sbjct: 487 LGRRIFRSMTQDYNITPKLEHYGC 510
>gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 133 bits (334), Expect = 7e-29
Identities = 76/209 (36%), Positives = 114/209 (54%), Gaps = 1/209 (0%)
Frame = +1
Query: 88 IKIGLVHDADPTARPLDGLGLTSNAGSLAHSPLVFERIPHRDAFAWNAMIRALSHSRNPE 267
IKIGL + ++ LD LT L ++ VF+ I + +WN MIR + S +P
Sbjct: 1 IKIGLHNTNYALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPI 60
Query: 268 KALLLYCQMPFEPRMLNSYTFPFLLKACVASPSA-DTRQVHCHVVKHGFAAEVHTENALL 444
AL LY M NSYTFPFL K+C S +A + +Q+H ++K+G ++H +L+
Sbjct: 61 SALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLI 120
Query: 445 HTYARSGXXXXXXXXXXXXXXXXXXTWNSMIDGYARSGRLNSARQLFDLMPNRNVVSWTT 624
YA++G ++ +MI GYA G ++ A+++FD +P ++VVSW
Sbjct: 121 SMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNA 180
Query: 625 MIATYVERCLYKEALELFRAMQLSEIKPD 711
MI+ Y E YKEALELF M ++KPD
Sbjct: 181 MISGYAEIGRYKEALELFNEMMKMDVKPD 209
Score = 63.5 bits (153), Expect = 7e-08
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 1/177 (0%)
Frame = +1
Query: 154 SNAGSLAHSPLVFERIPHRDAFAWNAMIRALSHSRNPEKALLLYCQMPFEPRMLNSYTFP 333
++ G++ + +F+ IP +D +WNAMI + ++AL L+ +M + T
Sbjct: 155 ASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMA 214
Query: 334 FLLKACVASPSADT-RQVHCHVVKHGFAAEVHTENALLHTYARSGXXXXXXXXXXXXXXX 510
+L C S + + RQ+H + HGF + + NAL+ Y++ G
Sbjct: 215 TVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYK 274
Query: 511 XXXTWNSMIDGYARSGRLNSARQLFDLMPNRNVVSWTTMIATYVERCLYKEALELFR 681
+WN++I GYA A +F M + + + C + A+++ R
Sbjct: 275 DVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGR 331
>ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223534500|gb|EEF36200.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 491
Score = 133 bits (334), Expect = 7e-29
Identities = 75/223 (33%), Positives = 114/223 (51%), Gaps = 1/223 (0%)
Frame = +1
Query: 64 LKPIRGDMIKIGLVHDADPTARPLDGLGLTSNAGSLAHSPLVFERIPHRDAFAWNAMIRA 243
+K I+ + G + D A+ + L+SN SL+H+ +F + HR F WN +IRA
Sbjct: 26 IKQIQTHLTVSGTLKDPYAAAKIISFCALSSNQFSLSHAYRLFLGLRHRSTFIWNTVIRA 85
Query: 244 LSHSRNPEKALLLYCQMPFEPRMLNSYTFPFLLKACVASPSADTRQV-HCHVVKHGFAAE 420
+ P KA++L+ M + + N+YT+ FL KAC + HC +K G+
Sbjct: 86 FAEKNEPRKAIMLFKNMLYSNFLPNNYTYSFLFKACTDLNNLYLGLACHCQSIKLGWEFY 145
Query: 421 VHTENALLHTYARSGXXXXXXXXXXXXXXXXXXTWNSMIDGYARSGRLNSARQLFDLMPN 600
+N L+H +A G TW ++I+GY R+G++ R+LFD MP
Sbjct: 146 DFVQNGLVHMFAIFGCMDSARKLFDLSSNRDVITWTALINGYVRAGQVLIGRELFDKMPE 205
Query: 601 RNVVSWTTMIATYVERCLYKEALELFRAMQLSEIKPDVKVLTC 729
RN VSW+ MI YV ++EALELF AM +S P+ + C
Sbjct: 206 RNSVSWSAMITGYVRVGFFEEALELFNAMLISGFWPNHAGIVC 248
>ref|XP_006468953.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like isoform X1 [Citrus sinensis]
gi|568829286|ref|XP_006468954.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like isoform X2 [Citrus sinensis]
gi|568829288|ref|XP_006468955.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like isoform X3 [Citrus sinensis]
Length = 435
Score = 132 bits (333), Expect = 9e-29
Identities = 82/217 (37%), Positives = 119/217 (54%), Gaps = 1/217 (0%)
Frame = +1
Query: 64 LKPIRGDMIKIGLVHDADPTARPLDGLGLTSNAGSLAHSPLVFERIPHRDAFAWNAMIRA 243
LK I +I+ GL +D + LD L S G H+ LVF +I F WN MIRA
Sbjct: 46 LKLIHAKIIRHGLSNDQLLVRKLLD---LCSFYGKTDHALLVFSQIQCPHVFTWNLMIRA 102
Query: 244 LSHSRNPEKALLLYCQMPFEPRMLNSYTFPFLLKACVASPSADT-RQVHCHVVKHGFAAE 420
L+ + + ++ALLLY M + +TFPF++KACVAS + + ++VH VK GF+ +
Sbjct: 103 LTINGSSQQALLLYNLMICNGFRPDKFTFPFVIKACVASLAIEKGKEVHGLAVKAGFSRD 162
Query: 421 VHTENALLHTYARSGXXXXXXXXXXXXXXXXXXTWNSMIDGYARSGRLNSARQLFDLMPN 600
+ +N L+ Y + G +W +MI G A SG L++AR++F+ M
Sbjct: 163 MFVQNTLMDLYFKCGDVDGGRMVFDKMRVRSVVSWTTMISGLAASGDLDAARRVFEQMQT 222
Query: 601 RNVVSWTTMIATYVERCLYKEALELFRAMQLSEIKPD 711
RNVVSWT MI YV +EA ELF+ M L ++P+
Sbjct: 223 RNVVSWTAMINAYVRNERAQEAFELFQRMLLDNVRPN 259
Score = 65.9 bits (159), Expect = 1e-08
Identities = 49/182 (26%), Positives = 76/182 (41%), Gaps = 5/182 (2%)
Frame = +1
Query: 160 AGSLAHSPLVFERIPHRDAFAWNAMIRALSHSRNPEKALLLYCQMPFEPRMLNSYTFPFL 339
+G L + VFE++ R+ +W AMI A + ++A L+ +M + N +T L
Sbjct: 207 SGDLDAARRVFEQMQTRNVVSWTAMINAYVRNERAQEAFELFQRMLLDNVRPNEFTLVSL 266
Query: 340 LKACVASPSADT-RQVHCHVVKHGFAAEVHTENALLHTYARSGXXXXXXXXXXXXXXXXX 516
L+AC S +H +K+GF V+ AL+ Y++ G
Sbjct: 267 LQACTELRSLKLGNWIHDFALKNGFVLGVYLGTALIDMYSKCGSLEDARKVFDKMEIKNL 326
Query: 517 XTWNSMIDGYARSGRLNSARQLFDLMPNRNV----VSWTTMIATYVERCLYKEALELFRA 684
TWNSMI G A LF M N NV +++ ++ V E FR
Sbjct: 327 ATWNSMITSLGVHGHGEEALALFAQMENANVHPDAITFVGVLCACVHENNVNEGYSYFRY 386
Query: 685 MQ 690
M+
Sbjct: 387 MR 388