BLASTX nr result
ID: Zingiber25_contig00040560
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00040560
(344 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFS65104.1| 40S ribosomal protein S3a-like protein [Elaeis gu... 66 4e-09
gb|AAZ99673.1| 40s ribosomal protein S3 [Cymbidium faberi] 64 2e-08
gb|ABK56834.1| RPS3 [Cymbidium hybrid cultivar] 64 2e-08
ref|XP_006848758.1| hypothetical protein AMTR_s00026p00042160 [A... 61 2e-07
ref|XP_006838990.1| hypothetical protein AMTR_s00002p00271660 [A... 57 2e-06
gb|AAV92214.1| 40S ribosomal protein S3a [Pseudotsuga menziesii ... 57 3e-06
gb|EOY11117.1| Ribosomal protein S3Ae [Theobroma cacao] 56 6e-06
sp|Q9MBB3.1|RS3A_DAUCA RecName: Full=40S ribosomal protein S3a; ... 55 7e-06
>gb|AFS65104.1| 40S ribosomal protein S3a-like protein [Elaeis guineensis]
Length = 261
Score = 66.2 bits (160), Expect = 4e-09
Identities = 29/35 (82%), Positives = 32/35 (91%)
Frame = -1
Query: 344 KLMEVHGDYKEDVGVKLDRPAEDVPMEGESEAIAA 240
KLMEVHGDYKEDVGVK+DRPA+DVPMEGE E + A
Sbjct: 227 KLMEVHGDYKEDVGVKIDRPADDVPMEGEPEVVGA 261
>gb|AAZ99673.1| 40s ribosomal protein S3 [Cymbidium faberi]
Length = 71
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = -1
Query: 344 KLMEVHGDYKEDVGVKLDRPAEDVPMEGESEAIAA 240
KLMEVHGDYKED GVKLDRP EDVP+EGE+E + A
Sbjct: 37 KLMEVHGDYKEDFGVKLDRPGEDVPVEGEAEVVGA 71
>gb|ABK56834.1| RPS3 [Cymbidium hybrid cultivar]
Length = 261
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = -1
Query: 344 KLMEVHGDYKEDVGVKLDRPAEDVPMEGESEAIAA 240
KLMEVHGDYKED GVKLDRP EDVP+EGE+E + A
Sbjct: 227 KLMEVHGDYKEDFGVKLDRPGEDVPVEGEAEVVGA 261
>ref|XP_006848758.1| hypothetical protein AMTR_s00026p00042160 [Amborella trichopoda]
gi|548852191|gb|ERN10339.1| hypothetical protein
AMTR_s00026p00042160 [Amborella trichopoda]
Length = 261
Score = 60.8 bits (146), Expect = 2e-07
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = -1
Query: 344 KLMEVHGDYKEDVGVKLDRPAEDVPMEGESEAIAA 240
KLMEVHGDY +DVGVK+DRPAEDVP+EG +E + A
Sbjct: 227 KLMEVHGDYSDDVGVKVDRPAEDVPLEGVTEVVGA 261
>ref|XP_006838990.1| hypothetical protein AMTR_s00002p00271660 [Amborella trichopoda]
gi|548841496|gb|ERN01559.1| hypothetical protein
AMTR_s00002p00271660 [Amborella trichopoda]
Length = 265
Score = 57.4 bits (137), Expect = 2e-06
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = -1
Query: 344 KLMEVHGDYKEDVGVKLDRPAEDVPMEGESEAIA 243
KLMEVHGDY +DVGVK++RPAEDV M+GE+E A
Sbjct: 232 KLMEVHGDYSDDVGVKVERPAEDVAMDGETEVAA 265
>gb|AAV92214.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481169|gb|AAV92215.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481171|gb|AAV92216.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481173|gb|AAV92217.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481175|gb|AAV92218.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481177|gb|AAV92219.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481179|gb|AAV92220.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481181|gb|AAV92221.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481183|gb|AAV92222.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481185|gb|AAV92223.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481187|gb|AAV92224.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481189|gb|AAV92225.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481191|gb|AAV92226.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481193|gb|AAV92227.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481195|gb|AAV92228.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481197|gb|AAV92229.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481199|gb|AAV92230.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481201|gb|AAV92231.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481203|gb|AAV92232.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481205|gb|AAV92233.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481207|gb|AAV92234.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481209|gb|AAV92235.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481211|gb|AAV92236.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481213|gb|AAV92237.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481215|gb|AAV92238.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481217|gb|AAV92239.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481219|gb|AAV92240.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481221|gb|AAV92241.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
Length = 57
Score = 56.6 bits (135), Expect = 3e-06
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = -1
Query: 344 KLMEVHGDYKEDVGVKLDRPAEDVPMEGESEAIAA 240
KLMEVHGDY EDVGVK+DRP ++VP E E+E + A
Sbjct: 23 KLMEVHGDYSEDVGVKVDRPVDEVPAEAETELVGA 57
>gb|EOY11117.1| Ribosomal protein S3Ae [Theobroma cacao]
Length = 261
Score = 55.8 bits (133), Expect = 6e-06
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = -1
Query: 344 KLMEVHGDYKEDVGVKLDRPAEDVPMEGESEAIAA 240
KLMEVHGDY EDVGVKL+RPA++ EGE+E + A
Sbjct: 227 KLMEVHGDYSEDVGVKLERPADETTAEGETEVVGA 261
>sp|Q9MBB3.1|RS3A_DAUCA RecName: Full=40S ribosomal protein S3a; AltName: Full=Protein
cyc07 gi|6714564|dbj|BAA89498.1| cyc07 [Daucus carota]
Length = 261
Score = 55.5 bits (132), Expect = 7e-06
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = -1
Query: 344 KLMEVHGDYKEDVGVKLDRPAEDVPMEGESEAIAA 240
KLMEVHGDY EDVGVKL+RP E+ +EGE+E + A
Sbjct: 227 KLMEVHGDYSEDVGVKLERPIEETMVEGETEVVGA 261