BLASTX nr result
ID: Zingiber25_contig00040470
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00040470
(930 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006339440.1| PREDICTED: pentatricopeptide repeat-containi... 79 3e-12
ref|XP_004229820.1| PREDICTED: pentatricopeptide repeat-containi... 77 9e-12
ref|XP_006445236.1| hypothetical protein CICLE_v10020287mg [Citr... 75 3e-11
emb|CBI38862.3| unnamed protein product [Vitis vinifera] 75 3e-11
ref|XP_002273719.1| PREDICTED: pentatricopeptide repeat-containi... 75 3e-11
gb|AFK47264.1| unknown [Lotus japonicus] 74 1e-10
ref|XP_002320730.1| hypothetical protein POPTR_0014s06610g [Popu... 73 1e-10
ref|XP_004134345.1| PREDICTED: pentatricopeptide repeat-containi... 72 3e-10
ref|XP_006826257.1| hypothetical protein AMTR_s00004p00026400 [A... 72 4e-10
ref|XP_006418475.1| hypothetical protein EUTSA_v10007755mg [Eutr... 71 7e-10
gb|EOX96192.1| Tetratricopeptide repeat (TPR)-like superfamily p... 71 7e-10
gb|EXB52663.1| hypothetical protein L484_022440 [Morus notabilis] 70 9e-10
ref|XP_003552343.1| PREDICTED: pentatricopeptide repeat-containi... 69 3e-09
ref|XP_004306911.1| PREDICTED: pentatricopeptide repeat-containi... 68 6e-09
ref|XP_004492640.1| PREDICTED: pentatricopeptide repeat-containi... 66 2e-08
ref|NP_171699.1| pentatricopeptide repeat-containing protein [Ar... 66 2e-08
ref|XP_002892034.1| pentatricopeptide repeat-containing protein ... 66 2e-08
ref|XP_003533639.2| PREDICTED: pentatricopeptide repeat-containi... 65 3e-08
gb|ESW12005.1| hypothetical protein PHAVU_008G076800g [Phaseolus... 65 3e-08
gb|ESW12084.1| hypothetical protein PHAVU_008G083500g [Phaseolus... 65 4e-08
>ref|XP_006339440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g01970-like [Solanum tuberosum]
Length = 415
Score = 78.6 bits (192), Expect = 3e-12
Identities = 35/79 (44%), Positives = 56/79 (70%)
Frame = +1
Query: 694 SLQSTSIGQDGESDNCCKKESKMIWTSIGSNITEAQKKAISQLPLKMSNRCKALLKRIIC 873
++ + ++ Q G ++N + + W IGS++TE Q++AI +LP KM NRCKAL+++IIC
Sbjct: 54 AVSNVAVHQKGSAENQVNDKPRYKWVKIGSDVTEEQQRAILKLPPKMINRCKALMQQIIC 113
Query: 874 FSTETDNLSLLLAVWVKAM 930
+S E ++SLLL WVK+M
Sbjct: 114 YSPEKGSVSLLLEAWVKSM 132
>ref|XP_004229820.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g01970-like [Solanum lycopersicum]
Length = 415
Score = 77.0 bits (188), Expect = 9e-12
Identities = 34/79 (43%), Positives = 55/79 (69%)
Frame = +1
Query: 694 SLQSTSIGQDGESDNCCKKESKMIWTSIGSNITEAQKKAISQLPLKMSNRCKALLKRIIC 873
++ + ++ Q ++N + + W IGS++TE Q++AI +LP KM NRCKAL+++IIC
Sbjct: 54 AVSNVAVNQKSSAENQVNDKPRYRWVKIGSDVTEEQQRAILKLPPKMINRCKALMQQIIC 113
Query: 874 FSTETDNLSLLLAVWVKAM 930
+S E ++SLLL WVK+M
Sbjct: 114 YSPEKGSVSLLLEAWVKSM 132
>ref|XP_006445236.1| hypothetical protein CICLE_v10020287mg [Citrus clementina]
gi|568875716|ref|XP_006490938.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g01970-like [Citrus sinensis]
gi|557547498|gb|ESR58476.1| hypothetical protein
CICLE_v10020287mg [Citrus clementina]
Length = 423
Score = 75.5 bits (184), Expect = 3e-11
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = +1
Query: 754 SKMIWTSIGSNITEAQKKAISQLPLKMSNRCKALLKRIICFSTETDNLSLLLAVWVKAM 930
S W IG NITE QK+AISQ P KM+ RCKA +K+IIC S ET NLS LLA WV+ M
Sbjct: 73 SMFTWIQIGPNITEEQKQAISQFPRKMTKRCKAFVKQIICVSPETGNLSDLLAAWVRFM 131
>emb|CBI38862.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 75.5 bits (184), Expect = 3e-11
Identities = 37/55 (67%), Positives = 42/55 (76%)
Frame = +1
Query: 766 WTSIGSNITEAQKKAISQLPLKMSNRCKALLKRIICFSTETDNLSLLLAVWVKAM 930
W IG NITEAQK ISQ+ LKM+ RCKAL+K+IICFS E +LS LLA WVK M
Sbjct: 11 WIEIGPNITEAQKMTISQISLKMTKRCKALVKQIICFSPEERSLSDLLAAWVKIM 65
>ref|XP_002273719.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g01970-like [Vitis vinifera]
Length = 352
Score = 75.5 bits (184), Expect = 3e-11
Identities = 37/55 (67%), Positives = 42/55 (76%)
Frame = +1
Query: 766 WTSIGSNITEAQKKAISQLPLKMSNRCKALLKRIICFSTETDNLSLLLAVWVKAM 930
W IG NITEAQK ISQ+ LKM+ RCKAL+K+IICFS E +LS LLA WVK M
Sbjct: 11 WIEIGPNITEAQKMTISQISLKMTKRCKALVKQIICFSPEERSLSDLLAAWVKIM 65
>gb|AFK47264.1| unknown [Lotus japonicus]
Length = 414
Score = 73.6 bits (179), Expect = 1e-10
Identities = 34/55 (61%), Positives = 41/55 (74%)
Frame = +1
Query: 766 WTSIGSNITEAQKKAISQLPLKMSNRCKALLKRIICFSTETDNLSLLLAVWVKAM 930
WT IG NIT Q +AIS+LP KM+ RCKAL+++IICFS E N+S LL WVK M
Sbjct: 78 WTEIGHNITHEQNEAISKLPFKMTKRCKALMRQIICFSAEKGNVSDLLNAWVKIM 132
>ref|XP_002320730.1| hypothetical protein POPTR_0014s06610g [Populus trichocarpa]
gi|222861503|gb|EEE99045.1| hypothetical protein
POPTR_0014s06610g [Populus trichocarpa]
Length = 407
Score = 73.2 bits (178), Expect = 1e-10
Identities = 34/62 (54%), Positives = 45/62 (72%)
Frame = +1
Query: 745 KKESKMIWTSIGSNITEAQKKAISQLPLKMSNRCKALLKRIICFSTETDNLSLLLAVWVK 924
K++ K W IG NI E QK+AISQLP KM+ RCKAL+++IICF+ + +L LL+ WVK
Sbjct: 68 KEKPKFRWVEIGPNIPEEQKQAISQLPFKMTKRCKALMRQIICFNDKKGSLRGLLSAWVK 127
Query: 925 AM 930
M
Sbjct: 128 IM 129
>ref|XP_004134345.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g01970-like [Cucumis sativus]
gi|449480346|ref|XP_004155867.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g01970-like [Cucumis sativus]
Length = 404
Score = 72.0 bits (175), Expect = 3e-10
Identities = 32/62 (51%), Positives = 46/62 (74%)
Frame = +1
Query: 745 KKESKMIWTSIGSNITEAQKKAISQLPLKMSNRCKALLKRIICFSTETDNLSLLLAVWVK 924
+++ + W +G +ITE QK+AISQLP KM+ RCKA++K+IICFS + LS +LA WV+
Sbjct: 61 REKPRFRWVEVGYDITETQKQAISQLPPKMTKRCKAVMKQIICFSPQKGELSDMLAAWVR 120
Query: 925 AM 930
M
Sbjct: 121 IM 122
>ref|XP_006826257.1| hypothetical protein AMTR_s00004p00026400 [Amborella trichopoda]
gi|548830571|gb|ERM93494.1| hypothetical protein
AMTR_s00004p00026400 [Amborella trichopoda]
Length = 404
Score = 71.6 bits (174), Expect = 4e-10
Identities = 37/85 (43%), Positives = 51/85 (60%)
Frame = +1
Query: 676 LQVSKCSLQSTSIGQDGESDNCCKKESKMIWTSIGSNITEAQKKAISQLPLKMSNRCKAL 855
LQ S + T ++ E+ KMIW GS+I+E+QK +SQLP KMS RCKAL
Sbjct: 39 LQQSISLPEKTQHEEERENAQAINLPQKMIWVDAGSDISESQKLLMSQLPAKMSKRCKAL 98
Query: 856 LKRIICFSTETDNLSLLLAVWVKAM 930
++ IIC S D+ S +L +WV+ M
Sbjct: 99 MRHIICLSDGDDDPSGMLGLWVRTM 123
>ref|XP_006418475.1| hypothetical protein EUTSA_v10007755mg [Eutrema salsugineum]
gi|557096246|gb|ESQ36828.1| hypothetical protein
EUTSA_v10007755mg [Eutrema salsugineum]
Length = 414
Score = 70.9 bits (172), Expect = 7e-10
Identities = 30/67 (44%), Positives = 48/67 (71%)
Frame = +1
Query: 730 SDNCCKKESKMIWTSIGSNITEAQKKAISQLPLKMSNRCKALLKRIICFSTETDNLSLLL 909
+D ++ + IW +G N+TE Q +AI+++P+KMS RC+AL+++IICFS E ++ LL
Sbjct: 65 ADKDTEQSPRFIWVDVGLNLTEEQDEAITRIPIKMSKRCQALMRQIICFSREKGSVCDLL 124
Query: 910 AVWVKAM 930
A WV+ M
Sbjct: 125 AAWVRRM 131
>gb|EOX96192.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao]
Length = 420
Score = 70.9 bits (172), Expect = 7e-10
Identities = 35/78 (44%), Positives = 53/78 (67%)
Frame = +1
Query: 697 LQSTSIGQDGESDNCCKKESKMIWTSIGSNITEAQKKAISQLPLKMSNRCKALLKRIICF 876
+ S+++ + G+ + +K + W IG +I E QK+AI++LP KM+ RCKAL+K+IICF
Sbjct: 57 IASSNVEEKGKPETNEEKR-RYKWVEIGPDIAEEQKQAITELPFKMTKRCKALMKQIICF 115
Query: 877 STETDNLSLLLAVWVKAM 930
E +L+ LLA WVK M
Sbjct: 116 CPEKGSLADLLAAWVKIM 133
>gb|EXB52663.1| hypothetical protein L484_022440 [Morus notabilis]
Length = 406
Score = 70.5 bits (171), Expect = 9e-10
Identities = 36/78 (46%), Positives = 53/78 (67%)
Frame = +1
Query: 697 LQSTSIGQDGESDNCCKKESKMIWTSIGSNITEAQKKAISQLPLKMSNRCKALLKRIICF 876
L +TS+ + +++N K K W +G ITE+QK+AISQL KM+ RC+AL+K++ICF
Sbjct: 43 LVATSVEETEKAENGGGKP-KFKWVEVGPGITESQKEAISQLSPKMTKRCRALMKQLICF 101
Query: 877 STETDNLSLLLAVWVKAM 930
S +L+ LLA WV+ M
Sbjct: 102 SAHKASLNELLAAWVRIM 119
>ref|XP_003552343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g01970-like isoform X1 [Glycine max]
gi|571548118|ref|XP_006602756.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g01970-like isoform X2 [Glycine max]
Length = 414
Score = 68.6 bits (166), Expect = 3e-09
Identities = 30/73 (41%), Positives = 51/73 (69%)
Frame = +1
Query: 712 IGQDGESDNCCKKESKMIWTSIGSNITEAQKKAISQLPLKMSNRCKALLKRIICFSTETD 891
+ ++G+ DN + + W +G N+ + Q++AIS+LP +M++RCKAL+++IIC+S E
Sbjct: 64 VKEEGKEDN----DRRYRWIEVGKNVPKEQQQAISKLPFRMADRCKALMRQIICYSAEKG 119
Query: 892 NLSLLLAVWVKAM 930
++S LL WVK M
Sbjct: 120 SMSDLLRSWVKLM 132
>ref|XP_004306911.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g01970-like [Fragaria vesca subsp. vesca]
Length = 415
Score = 67.8 bits (164), Expect = 6e-09
Identities = 36/95 (37%), Positives = 56/95 (58%)
Frame = +1
Query: 646 NLDVLEYRMKLQVSKCSLQSTSIGQDGESDNCCKKESKMIWTSIGSNITEAQKKAISQLP 825
NL +R + S++ T++ ++ E + + W IGS+ITEAQ+ AI +LP
Sbjct: 40 NLSSSGHRFHPPLMALSIEETAMAENTEG------KPRFKWGEIGSDITEAQQDAIDELP 93
Query: 826 LKMSNRCKALLKRIICFSTETDNLSLLLAVWVKAM 930
KMS RC+A++K+IICF+ E +L +L WV M
Sbjct: 94 PKMSKRCQAIMKQIICFAPEKGSLCEVLNAWVSIM 128
>ref|XP_004492640.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g01970-like isoform X1 [Cicer arietinum]
gi|502104764|ref|XP_004492641.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g01970-like isoform X2 [Cicer arietinum]
Length = 425
Score = 66.2 bits (160), Expect = 2e-08
Identities = 30/55 (54%), Positives = 39/55 (70%)
Frame = +1
Query: 766 WTSIGSNITEAQKKAISQLPLKMSNRCKALLKRIICFSTETDNLSLLLAVWVKAM 930
W I ++ITE QK AI++LP KM RCKA++++IICFS E NL +L WVK M
Sbjct: 89 WVEIRNDITEEQKNAIAKLPFKMIKRCKAVMRQIICFSAEKGNLCDVLGAWVKIM 143
>ref|NP_171699.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75264110|sp|Q9LPC4.1|PPR1_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g01970 gi|8570448|gb|AAF76475.1|AC020622_9 Contains
similarity to an unknown protein gi|AAD26479 from
Arabidopsis thaliana BAC gb|AC007169 and contains
multiple PPR PF|01535 repeats [Arabidopsis thaliana]
gi|34098825|gb|AAQ56795.1| At1g01970 [Arabidopsis
thaliana] gi|110735700|dbj|BAE99830.1| hypothetical
protein [Arabidopsis thaliana]
gi|332189240|gb|AEE27361.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 409
Score = 66.2 bits (160), Expect = 2e-08
Identities = 33/81 (40%), Positives = 53/81 (65%)
Frame = +1
Query: 688 KCSLQSTSIGQDGESDNCCKKESKMIWTSIGSNITEAQKKAISQLPLKMSNRCKALLKRI 867
KC+ S +IG+ E ++ + S W +G N+TE Q +AI+++P+KMS RC+AL+++I
Sbjct: 48 KCNA-SLAIGEVVEKEDAEQSRS-FNWADVGLNLTEEQDEAITRIPIKMSKRCQALMRQI 105
Query: 868 ICFSTETDNLSLLLAVWVKAM 930
ICFS E + LL W++ M
Sbjct: 106 ICFSPEKGSFCDLLGAWLRRM 126
>ref|XP_002892034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297337876|gb|EFH68293.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 409
Score = 66.2 bits (160), Expect = 2e-08
Identities = 33/81 (40%), Positives = 55/81 (67%)
Frame = +1
Query: 688 KCSLQSTSIGQDGESDNCCKKESKMIWTSIGSNITEAQKKAISQLPLKMSNRCKALLKRI 867
KCS S +IG+ E ++ ++ + W +G ++TE Q +AI+++P+KMS RC+AL+++I
Sbjct: 48 KCSA-SLAIGEVVEKEDT-EQIPRSNWVDVGLDLTEEQDEAITRIPIKMSKRCQALMRQI 105
Query: 868 ICFSTETDNLSLLLAVWVKAM 930
ICFS+E + LL WV+ M
Sbjct: 106 ICFSSEKGSFCDLLGAWVRRM 126
>ref|XP_003533639.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g01970-like [Glycine max]
Length = 415
Score = 65.5 bits (158), Expect = 3e-08
Identities = 29/60 (48%), Positives = 43/60 (71%)
Frame = +1
Query: 751 ESKMIWTSIGSNITEAQKKAISQLPLKMSNRCKALLKRIICFSTETDNLSLLLAVWVKAM 930
E + W +G N+T+ Q++AIS+LP +M++R KAL+++IICFS E +S LL WVK M
Sbjct: 73 ERRYRWIEVGKNVTKEQQQAISKLPFRMADRSKALMRQIICFSAEKGTISDLLRSWVKLM 132
>gb|ESW12005.1| hypothetical protein PHAVU_008G076800g [Phaseolus vulgaris]
gi|561013145|gb|ESW12006.1| hypothetical protein
PHAVU_008G076800g [Phaseolus vulgaris]
Length = 409
Score = 65.5 bits (158), Expect = 3e-08
Identities = 29/62 (46%), Positives = 43/62 (69%)
Frame = +1
Query: 745 KKESKMIWTSIGSNITEAQKKAISQLPLKMSNRCKALLKRIICFSTETDNLSLLLAVWVK 924
+ E + W +G+N+T Q++AIS+LP +MS R KAL+++IICFS E +S LL WV+
Sbjct: 66 ENERRFRWIEVGNNVTIEQRQAISELPFRMSKRSKALMRQIICFSAEKGTISDLLESWVR 125
Query: 925 AM 930
M
Sbjct: 126 IM 127
>gb|ESW12084.1| hypothetical protein PHAVU_008G083500g [Phaseolus vulgaris]
Length = 409
Score = 65.1 bits (157), Expect = 4e-08
Identities = 29/62 (46%), Positives = 42/62 (67%)
Frame = +1
Query: 745 KKESKMIWTSIGSNITEAQKKAISQLPLKMSNRCKALLKRIICFSTETDNLSLLLAVWVK 924
+ E + W +G N+T Q++AIS+LP +MS R KAL+++IICFS E +S LL WV+
Sbjct: 66 ENERRFRWIEVGKNVTIEQRQAISELPFRMSKRSKALMRQIICFSAEKGTISDLLESWVR 125
Query: 925 AM 930
M
Sbjct: 126 IM 127