BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00040402
         (290 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004485775.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08
ref|XP_004139030.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08
gb|EXB93300.1| hypothetical protein L484_015288 [Morus notabilis]      60   3e-07
ref|XP_004299839.1| PREDICTED: pentatricopeptide repeat-containi...    59   7e-07
ref|XP_004154679.1| PREDICTED: pentatricopeptide repeat-containi...    59   7e-07
ref|XP_002325053.2| hypothetical protein POPTR_0018s10010g [Popu...    57   2e-06
emb|CBI24302.3| unnamed protein product [Vitis vinifera]               56   4e-06

>ref|XP_004485775.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cicer arietinum]
          Length = 522

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 20/113 (17%)
 Frame = +2

Query: 11  LAMIPRLSYKPLLRSISPDDALQQLDRLLH----------------LSPFPS---DHRTY 133
           L  I +L+   L+R+ +P    QQL  L++                LS  PS   +H T+
Sbjct: 6   LNQIAKLAQSLLIRNPNPQFLNQQLSHLVNSHDDNGDAFFNLYNQMLSHSPSSSHNHYTF 65

Query: 134 TFLLRLCSFLHPVH-GLQLHARLLKSGFHSHLFLQNSLLSFYSSAADIPSTRR 289
           T+ L+ CS LH +  GL++HARL+KSG  + LF++NSLL FY S+ D+ S  R
Sbjct: 66  TYALKACSSLHALSKGLEIHARLVKSGHITDLFIKNSLLHFYLSSNDVLSATR 118


>ref|XP_004139030.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like isoform 1 [Cucumis sativus]
           gi|449442523|ref|XP_004139031.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like isoform 2 [Cucumis sativus]
          Length = 517

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
 Frame = +2

Query: 2   FNPLAMIPRLSYKPLLRSISPDDALQQLDRLLHLSPFPSDHRTYTFLLRLCSFLHPVH-G 178
           FNPL          L+ SI P++ L   +++L   P   +H T+T+ L+ C FLH    G
Sbjct: 31  FNPLL-------GSLVNSIFPENGLFLYNQMLRY-PSSHNHFTFTYALKACCFLHQTQKG 82

Query: 179 LQLHARLLKSGFHSHLFLQNSLLSFYSSAADIPS 280
           L++HA L+KSG  S +F+QNSLL FY    D+ S
Sbjct: 83  LEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSS 116


>gb|EXB93300.1| hypothetical protein L484_015288 [Morus notabilis]
          Length = 461

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = +2

Query: 92  LLHLSPFPSDHRTYTFLLRLCSFLHP-VHGLQLHARLLKSGFHSHLFLQNSLLSFYSSAA 268
           +LH      +H T+T+ L+ C+ LH    GL++HA +LK G+H  +F+QNSLL FY++  
Sbjct: 1   MLHFPTNCYNHYTFTYALKACNSLHAHPKGLEIHAHVLKCGYHHDIFIQNSLLHFYTTKN 60

Query: 269 DIPSTRR 289
           DI S  R
Sbjct: 61  DIISASR 67


>ref|XP_004299839.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 502

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
 Frame = +2

Query: 8   PLAMIPRLSYKPLLRSISPDDALQQLDRLLHLSPFPSDHRTYTFLLRLCSFLHPVH-GLQ 184
           P  + P L +  L  S +P +AL   +++LH  P   +H T+T+ L+ C  LH  H G +
Sbjct: 17  PQVLNPWLGF--LTNSSAPQNALLLYNQMLH-HPTSHNHYTFTYALKACCLLHSPHKGQE 73

Query: 185 LHARLLKSGFHSHLFLQNSLLSFYSSAADIPS 280
           + A + KSG  S  F+QNSLL FY   +DI S
Sbjct: 74  IQAHVTKSGHISDTFIQNSLLHFYVIQSDIVS 105


>ref|XP_004154679.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like, partial [Cucumis sativus]
          Length = 472

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
 Frame = +2

Query: 107 PFPSDHRTYTFLLRLCSFLHPVH-GLQLHARLLKSGFHSHLFLQNSLLSFYSSAADIPS 280
           P   +H T+T+ L+ C FLH    GL++HA L+KSG  S +F+QNSLL FY    D+ S
Sbjct: 13  PISHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSS 71


>ref|XP_002325053.2| hypothetical protein POPTR_0018s10010g [Populus trichocarpa]
           gi|550318436|gb|EEF03618.2| hypothetical protein
           POPTR_0018s10010g [Populus trichocarpa]
          Length = 595

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
 Frame = +2

Query: 104 SPFPSDHRTYTFLLRLCSFLHPV-HGLQLHARLLKSGFHSHLFLQNSLLSFYSSAADIPS 280
           SPFP +H T+ F+L+ C++L  +  G Q HA LLK GF S +++ NSL+ FY+S   + S
Sbjct: 109 SPFPDNH-TFPFVLKACAYLFALFEGKQAHAHLLKLGFQSDVYINNSLIHFYASCGSLES 167

Query: 281 TR 286
            +
Sbjct: 168 AK 169


>emb|CBI24302.3| unnamed protein product [Vitis vinifera]
          Length = 541

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
 Frame = +2

Query: 23  PRLSYKPLLRSISPDDALQQLDRLLHLSPFPSDHRTYTFLLRLCSFLHPVHG-LQLHARL 199
           P L +  LL S+SP DAL   ++++ L     +H T+T  L   S LH +H  L++HAR 
Sbjct: 44  PPLIFNTLLPSLSPQDALLLYNQMV-LHRTSHNHFTFTHALIASSSLHALHKTLEIHARA 102

Query: 200 LKSGFHSHLFLQNSLLSFY 256
           +KSG +S +F+QN+LL  Y
Sbjct: 103 IKSGHYSDIFIQNTLLHSY 121