BLASTX nr result
ID: Zingiber25_contig00040348
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00040348
(495 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006650856.1| PREDICTED: probable polygalacturonase-like i... 78 1e-12
ref|NP_001051812.1| Os03g0833800 [Oryza sativa Japonica Group] g... 78 1e-12
gb|ACN35154.1| unknown [Zea mays] 72 8e-11
gb|ACN28107.1| unknown [Zea mays] gi|414873755|tpg|DAA52312.1| T... 72 8e-11
ref|NP_001151479.1| polygalacturonase precursor [Zea mays] gi|19... 72 8e-11
gb|EMT19370.1| Putative polygalacturonase [Aegilops tauschii] 70 2e-10
ref|XP_003563034.1| PREDICTED: probable polygalacturonase-like [... 70 2e-10
dbj|BAJ96905.1| predicted protein [Hordeum vulgare subsp. vulgare] 69 5e-10
dbj|BAJ94566.1| predicted protein [Hordeum vulgare subsp. vulgare] 69 5e-10
gb|ABF99735.1| glycoside hydrolase family 28 protein, putative, ... 67 2e-09
gb|EMS54613.1| putative polygalacturonase [Triticum urartu] 67 2e-09
ref|XP_006657587.1| PREDICTED: probable polygalacturonase-like i... 66 5e-09
ref|XP_006657586.1| PREDICTED: probable polygalacturonase-like i... 66 5e-09
ref|XP_003557344.1| PREDICTED: probable polygalacturonase-like [... 65 9e-09
ref|XP_002535132.1| Polygalacturonase precursor, putative [Ricin... 64 2e-08
ref|XP_004955888.1| PREDICTED: probable polygalacturonase-like i... 63 3e-08
ref|XP_002463589.1| hypothetical protein SORBIDRAFT_01g002550 [S... 63 5e-08
gb|EEE66877.1| hypothetical protein OsJ_23693 [Oryza sativa Japo... 63 5e-08
gb|EEC81792.1| hypothetical protein OsI_25505 [Oryza sativa Indi... 63 5e-08
gb|EOX95459.1| Pectin lyase-like superfamily protein isoform 1 [... 62 6e-08
>ref|XP_006650856.1| PREDICTED: probable polygalacturonase-like isoform X1 [Oryza
brachyantha] gi|573926658|ref|XP_006650857.1| PREDICTED:
probable polygalacturonase-like isoform X2 [Oryza
brachyantha]
Length = 476
Score = 77.8 bits (190), Expect = 1e-12
Identities = 33/58 (56%), Positives = 49/58 (84%)
Frame = +2
Query: 320 LMKTSAVLRILLVLATVGQFLWTAMASSYCKEMGSSTYRPHSVTVTEFGAVGDGVTLN 493
+ +++++L++LLV T+ W++++S+YCK+M SS YRPHSVT+TEFGAVGDGVTLN
Sbjct: 1 MRRSASLLQVLLVFITMVATQWSSVSSTYCKDMASSVYRPHSVTITEFGAVGDGVTLN 58
>ref|NP_001051812.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|40714685|gb|AAR88591.1| putative polygalacturonase
[Oryza sativa Japonica Group]
gi|108711938|gb|ABF99733.1| glycoside hydrolase family
28 protein, putative, expressed [Oryza sativa Japonica
Group] gi|108711939|gb|ABF99734.1| glycoside hydrolase
family 28 protein, putative, expressed [Oryza sativa
Japonica Group] gi|113550283|dbj|BAF13726.1|
Os03g0833800 [Oryza sativa Japonica Group]
gi|215694675|dbj|BAG89866.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 476
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/58 (58%), Positives = 48/58 (82%)
Frame = +2
Query: 320 LMKTSAVLRILLVLATVGQFLWTAMASSYCKEMGSSTYRPHSVTVTEFGAVGDGVTLN 493
+ +++++LR+LLV T+ W+ ++S+YCK+M SS YRPHSVT+TEFGAVGDGVTLN
Sbjct: 1 MRRSASLLRVLLVFITMVGTQWSNVSSTYCKDMASSVYRPHSVTITEFGAVGDGVTLN 58
>gb|ACN35154.1| unknown [Zea mays]
Length = 430
Score = 72.0 bits (175), Expect = 8e-11
Identities = 35/58 (60%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Frame = +2
Query: 323 MKTSAVL-RILLVLATVGQFLWTAMASSYCKEMGSSTYRPHSVTVTEFGAVGDGVTLN 493
MK SA L ++LLV V + W+ ++S YCK+M + YRPHSVT+TEFGAVGDGVTLN
Sbjct: 1 MKRSASLFQVLLVFTAVIEIQWSTVSSIYCKDMPPNVYRPHSVTITEFGAVGDGVTLN 58
>gb|ACN28107.1| unknown [Zea mays] gi|414873755|tpg|DAA52312.1| TPA:
polygalacturonase isoform 1 [Zea mays]
gi|414873756|tpg|DAA52313.1| TPA: polygalacturonase
isoform 2 [Zea mays]
Length = 477
Score = 72.0 bits (175), Expect = 8e-11
Identities = 35/58 (60%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Frame = +2
Query: 323 MKTSAVL-RILLVLATVGQFLWTAMASSYCKEMGSSTYRPHSVTVTEFGAVGDGVTLN 493
MK SA L ++LLV V + W+ ++S YCK+M + YRPHSVT+TEFGAVGDGVTLN
Sbjct: 1 MKRSASLFQVLLVFTAVIEIQWSTVSSIYCKDMPPNVYRPHSVTITEFGAVGDGVTLN 58
>ref|NP_001151479.1| polygalacturonase precursor [Zea mays] gi|195647062|gb|ACG42999.1|
polygalacturonase [Zea mays]
Length = 477
Score = 72.0 bits (175), Expect = 8e-11
Identities = 35/58 (60%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Frame = +2
Query: 323 MKTSAVL-RILLVLATVGQFLWTAMASSYCKEMGSSTYRPHSVTVTEFGAVGDGVTLN 493
MK SA L ++LLV V + W+ ++S YCK+M + YRPHSVT+TEFGAVGDGVTLN
Sbjct: 1 MKRSASLFQVLLVFTAVIEIQWSTVSSIYCKDMPPNVYRPHSVTITEFGAVGDGVTLN 58
>gb|EMT19370.1| Putative polygalacturonase [Aegilops tauschii]
Length = 540
Score = 70.5 bits (171), Expect = 2e-10
Identities = 30/56 (53%), Positives = 43/56 (76%)
Frame = +2
Query: 326 KTSAVLRILLVLATVGQFLWTAMASSYCKEMGSSTYRPHSVTVTEFGAVGDGVTLN 493
+++ V + LLV T+ + W++++ YC +M S+ YRPHSVT+TEFGAVGDGVTLN
Sbjct: 99 RSAPVFQALLVFLTIIETQWSSVSGMYCADMASTVYRPHSVTITEFGAVGDGVTLN 154
>ref|XP_003563034.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 475
Score = 70.5 bits (171), Expect = 2e-10
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = +2
Query: 320 LMKTSAVLRILLVLATVGQFLWTAMASSYCKEMGSSTYRPHSVTVTEFGAVGDGVTLN 493
+ ++++V R LLV + + W ++ YCK+M S YRPHSVT+TEFGAVGDGV LN
Sbjct: 1 MRRSASVFRALLVFTAIVETQWPGVSGIYCKDMASGVYRPHSVTITEFGAVGDGVALN 58
>dbj|BAJ96905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 69.3 bits (168), Expect = 5e-10
Identities = 29/58 (50%), Positives = 42/58 (72%)
Frame = +2
Query: 320 LMKTSAVLRILLVLATVGQFLWTAMASSYCKEMGSSTYRPHSVTVTEFGAVGDGVTLN 493
+ ++ + LLV T+ + W++++ YC +M S+ YRPHSVT+TEFGAVGDGVTLN
Sbjct: 1 MARSKPTFQALLVFLTIVETQWSSVSGMYCADMASTVYRPHSVTITEFGAVGDGVTLN 58
>dbj|BAJ94566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 69.3 bits (168), Expect = 5e-10
Identities = 29/58 (50%), Positives = 42/58 (72%)
Frame = +2
Query: 320 LMKTSAVLRILLVLATVGQFLWTAMASSYCKEMGSSTYRPHSVTVTEFGAVGDGVTLN 493
+ ++ + LLV T+ + W++++ YC +M S+ YRPHSVT+TEFGAVGDGVTLN
Sbjct: 1 MARSKPTFQALLVFLTIVETQWSSVSGMYCADMASTVYRPHSVTITEFGAVGDGVTLN 58
>gb|ABF99735.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group] gi|218194041|gb|EEC76468.1|
hypothetical protein OsI_14200 [Oryza sativa Indica
Group] gi|222626115|gb|EEE60247.1| hypothetical protein
OsJ_13254 [Oryza sativa Japonica Group]
Length = 460
Score = 67.4 bits (163), Expect = 2e-09
Identities = 28/37 (75%), Positives = 34/37 (91%)
Frame = +2
Query: 383 WTAMASSYCKEMGSSTYRPHSVTVTEFGAVGDGVTLN 493
W+ ++S+YCK+M SS YRPHSVT+TEFGAVGDGVTLN
Sbjct: 6 WSNVSSTYCKDMASSVYRPHSVTITEFGAVGDGVTLN 42
>gb|EMS54613.1| putative polygalacturonase [Triticum urartu]
Length = 541
Score = 67.0 bits (162), Expect = 2e-09
Identities = 28/49 (57%), Positives = 39/49 (79%)
Frame = +2
Query: 347 ILLVLATVGQFLWTAMASSYCKEMGSSTYRPHSVTVTEFGAVGDGVTLN 493
+L+ L T+ + W++++ YC +M S+ YRPHSVT+TEFGAVGDGVTLN
Sbjct: 107 LLVFLITIIETQWSSVSGMYCADMASTVYRPHSVTITEFGAVGDGVTLN 155
>ref|XP_006657587.1| PREDICTED: probable polygalacturonase-like isoform X2 [Oryza
brachyantha]
Length = 442
Score = 65.9 bits (159), Expect = 5e-09
Identities = 30/57 (52%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Frame = +2
Query: 326 KTSAVLRILLVLATV-GQFLWTAMASSYCKEMGSSTYRPHSVTVTEFGAVGDGVTLN 493
++++ L++LLV ATV WT + YC ++ +S +RPHSV++TEFGAVGDGVTLN
Sbjct: 4 RSASALQVLLVFATVFAGTQWTTSSGMYCNDLTASVHRPHSVSITEFGAVGDGVTLN 60
>ref|XP_006657586.1| PREDICTED: probable polygalacturonase-like isoform X1 [Oryza
brachyantha]
Length = 480
Score = 65.9 bits (159), Expect = 5e-09
Identities = 30/57 (52%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Frame = +2
Query: 326 KTSAVLRILLVLATV-GQFLWTAMASSYCKEMGSSTYRPHSVTVTEFGAVGDGVTLN 493
++++ L++LLV ATV WT + YC ++ +S +RPHSV++TEFGAVGDGVTLN
Sbjct: 4 RSASALQVLLVFATVFAGTQWTTSSGMYCNDLTASVHRPHSVSITEFGAVGDGVTLN 60
>ref|XP_003557344.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 479
Score = 65.1 bits (157), Expect = 9e-09
Identities = 27/59 (45%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Frame = +2
Query: 320 LMKTSAVLRILLVLATVG-QFLWTAMASSYCKEMGSSTYRPHSVTVTEFGAVGDGVTLN 493
+ +++++ + LLV TV + W++++ YCK++ +S YRPHSV++TEFGAVGDG+T N
Sbjct: 1 MSRSASIFQALLVFTTVAAEIQWSSVSGMYCKDLTASVYRPHSVSITEFGAVGDGMTRN 59
>ref|XP_002535132.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223523955|gb|EEF27252.1| Polygalacturonase precursor,
putative [Ricinus communis]
Length = 476
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/49 (61%), Positives = 34/49 (69%)
Frame = +2
Query: 347 ILLVLATVGQFLWTAMASSYCKEMGSSTYRPHSVTVTEFGAVGDGVTLN 493
+LLVLA W SS+CK S+ RPHSVT+TEFGAVGDGVTLN
Sbjct: 20 LLLVLALFSDVTWHIRGSSHCKRANSADIRPHSVTITEFGAVGDGVTLN 68
>ref|XP_004955888.1| PREDICTED: probable polygalacturonase-like isoform X1 [Setaria
italica] gi|514726069|ref|XP_004955889.1| PREDICTED:
probable polygalacturonase-like isoform X2 [Setaria
italica]
Length = 480
Score = 63.2 bits (152), Expect = 3e-08
Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = +2
Query: 329 TSAVLRILLVLAT-VGQFLWTAMASSYCKEMGSSTYRPHSVTVTEFGAVGDGVTLN 493
++ + R+LLV AT V Q W++++ YC ++ S RPHS ++T+FGAVGDGVTLN
Sbjct: 4 SATIFRVLLVFATFVAQTQWSSVSGMYCNDLTPSVERPHSASITDFGAVGDGVTLN 59
>ref|XP_002463589.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
gi|241917443|gb|EER90587.1| hypothetical protein
SORBIDRAFT_01g002550 [Sorghum bicolor]
Length = 459
Score = 62.8 bits (151), Expect = 5e-08
Identities = 25/37 (67%), Positives = 32/37 (86%)
Frame = +2
Query: 383 WTAMASSYCKEMGSSTYRPHSVTVTEFGAVGDGVTLN 493
W+ ++S YCK+M + YRPHSVT+TEFGA+GDGVTLN
Sbjct: 6 WSTVSSIYCKDMPPNVYRPHSVTITEFGAIGDGVTLN 42
>gb|EEE66877.1| hypothetical protein OsJ_23693 [Oryza sativa Japonica Group]
Length = 506
Score = 62.8 bits (151), Expect = 5e-08
Identities = 28/59 (47%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Frame = +2
Query: 320 LMKTSAVLRILLVLATV-GQFLWTAMASSYCKEMGSSTYRPHSVTVTEFGAVGDGVTLN 493
+ ++++ L++LLV ATV W ++ YC ++ +S +RPHSV++TEFGAV DGVTLN
Sbjct: 30 MSRSASALQVLLVFATVFAATQWATSSAMYCNDLTASVHRPHSVSITEFGAVNDGVTLN 88
>gb|EEC81792.1| hypothetical protein OsI_25505 [Oryza sativa Indica Group]
Length = 506
Score = 62.8 bits (151), Expect = 5e-08
Identities = 28/59 (47%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Frame = +2
Query: 320 LMKTSAVLRILLVLATV-GQFLWTAMASSYCKEMGSSTYRPHSVTVTEFGAVGDGVTLN 493
+ ++++ L++LLV ATV W ++ YC ++ +S +RPHSV++TEFGAV DGVTLN
Sbjct: 30 MSRSASALQVLLVFATVFAATQWATSSAMYCNDLTASVHRPHSVSITEFGAVNDGVTLN 88
>gb|EOX95459.1| Pectin lyase-like superfamily protein isoform 1 [Theobroma cacao]
gi|508703564|gb|EOX95460.1| Pectin lyase-like
superfamily protein isoform 1 [Theobroma cacao]
Length = 468
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = +2
Query: 320 LMKTSAVLRILLVLATVGQFLWTAMASSYCKEMGSSTYRPHSVTVTEFGAVGDGVTLN 493
+ ++ ++L +LL+LA V W S +CK RPHSVT+TEFGAVGDGVTLN
Sbjct: 1 MKRSFSLLDVLLLLAFVSHTTWAVKGSLHCKRTNLGETRPHSVTITEFGAVGDGVTLN 58