BLASTX nr result

ID: Zingiber25_contig00040292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00040292
         (368 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006586321.1| PREDICTED: pentatricopeptide repeat-containi...    68   1e-09
ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    61   1e-07
gb|ESW31938.1| hypothetical protein PHAVU_002G280500g [Phaseolus...    58   1e-06
ref|XP_004309554.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06
dbj|BAJ53111.1| JHL07K02.1 [Jatropha curcas]                           57   2e-06
ref|XP_006436989.1| hypothetical protein CICLE_v10033340mg, part...    57   3e-06
ref|XP_006485061.1| PREDICTED: pentatricopeptide repeat-containi...    55   7e-06
ref|XP_004503812.1| PREDICTED: pentatricopeptide repeat-containi...    55   7e-06

>ref|XP_006586321.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61800-like [Glycine max]
          Length = 496

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 37/117 (31%), Positives = 51/117 (43%)
 Frame = +1

Query: 16  RRCKSLRHLKAIHAHATVHGLTSLYPSPXXXXXXXXXXXXXXXXXNHRXXXXXXXXXXXX 195
           ++CKS+  L  +HAH+   GL  L+  P                 N              
Sbjct: 8   KQCKSISQLHQVHAHSITTGLLPLHTFPILNNILSTLSSLLTTSSNSNSIITFYALSL-- 65

Query: 196 XXXXXFHAIPFPSAFPYNLLMRVHTXXXXXXXXXXXFACMRRSAVPPDLHTFPFALK 366
                FH+IP PS F +N L+R+HT           F+ +RR ++PPD HTFPF LK
Sbjct: 66  -----FHSIPNPSTFSFNTLIRIHTLLLSPLPALHLFSTLRRLSLPPDFHTFPFVLK 117


>ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g61800 [Vitis vinifera]
          Length = 576

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 40/118 (33%), Positives = 48/118 (40%), Gaps = 1/118 (0%)
 Frame = +1

Query: 16  RRCKSLRHLKAIHAHATVHGLT-SLYPSPXXXXXXXXXXXXXXXXXNHRXXXXXXXXXXX 192
           R+CKSL+ L  +HAH    GL   L+ S                  N             
Sbjct: 23  RQCKSLKQLHQVHAHTITTGLLWGLHHSSLLLTNILTAFTALLPTTN---ASPTTPAALT 79

Query: 193 XXXXXXFHAIPFPSAFPYNLLMRVHTXXXXXXXXXXXFACMRRSAVPPDLHTFPFALK 366
                 F+ IP PS F YN ++R HT           F  MRR +VPPD HTFPF LK
Sbjct: 80  GYALSVFNRIPNPSTFGYNTMIRAHTLLSSPLAALVIFVRMRRLSVPPDTHTFPFCLK 137


>gb|ESW31938.1| hypothetical protein PHAVU_002G280500g [Phaseolus vulgaris]
          Length = 498

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 34/119 (28%), Positives = 48/119 (40%)
 Frame = +1

Query: 10  LHRRCKSLRHLKAIHAHATVHGLTSLYPSPXXXXXXXXXXXXXXXXXNHRXXXXXXXXXX 189
           L  +CKS+  L  IH H    G+  L P                    +           
Sbjct: 8   LINQCKSISQLYQIHGHTITAGV--LPPHTLPIFNNILSTLTTLLSSPNTTTTHYSNSII 65

Query: 190 XXXXXXXFHAIPFPSAFPYNLLMRVHTXXXXXXXXXXXFACMRRSAVPPDLHTFPFALK 366
                  FH++P P+ F +N L+R+HT           F+ +RR ++PPD HTFPF LK
Sbjct: 66  TYYALSLFHSLPNPTTFSFNTLIRIHTLLLSPLPALRLFSTLRRLSLPPDFHTFPFVLK 124


>ref|XP_004309554.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61800-like [Fragaria vesca subsp. vesca]
          Length = 527

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 37/119 (31%), Positives = 48/119 (40%)
 Frame = +1

Query: 10  LHRRCKSLRHLKAIHAHATVHGLTSLYPSPXXXXXXXXXXXXXXXXXNHRXXXXXXXXXX 189
           L + CK+ + L  IHAH T    T+    P                 +            
Sbjct: 10  LIKHCKTPKQLHQIHAHTTTATATATASHPKILPNLLHTFTSLLKPSSS--------PTS 61

Query: 190 XXXXXXXFHAIPFPSAFPYNLLMRVHTXXXXXXXXXXXFACMRRSAVPPDLHTFPFALK 366
                  F+ IP PS F +N L+R HT           FA +RR ++PPD HTFPFALK
Sbjct: 62  LTYATSLFNLIPNPSTFSFNNLIRAHTLLSSPLPALHLFASLRRLSLPPDFHTFPFALK 120


>dbj|BAJ53111.1| JHL07K02.1 [Jatropha curcas]
          Length = 248

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 36/119 (30%), Positives = 49/119 (41%)
 Frame = +1

Query: 10  LHRRCKSLRHLKAIHAHATVHGLTSLYPSPXXXXXXXXXXXXXXXXXNHRXXXXXXXXXX 189
           L ++CK++ HL  +HA+A  +G  SL  S                   +           
Sbjct: 17  LIKQCKTIHHLHQLHANAITNGFLSLNSSSQKILTKILYSL-------NATATSKSSTSL 69

Query: 190 XXXXXXXFHAIPFPSAFPYNLLMRVHTXXXXXXXXXXXFACMRRSAVPPDLHTFPFALK 366
                  F AI  PS F YNL++R HT           F  MRR ++PPD H+FPF  K
Sbjct: 70  LQYAVSVFSAITNPSPFCYNLVIRAHTLHSSPLSALRFFLQMRRFSIPPDFHSFPFVFK 128


>ref|XP_006436989.1| hypothetical protein CICLE_v10033340mg, partial [Citrus clementina]
           gi|557539185|gb|ESR50229.1| hypothetical protein
           CICLE_v10033340mg, partial [Citrus clementina]
          Length = 527

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 35/119 (29%), Positives = 51/119 (42%)
 Frame = +1

Query: 10  LHRRCKSLRHLKAIHAHATVHGLTSLYPSPXXXXXXXXXXXXXXXXXNHRXXXXXXXXXX 189
           L +RCK+++ +  IHAH    GL  L+ SP                 +            
Sbjct: 10  LIKRCKTIKQIHQIHAHFLTKGL--LFLSPCHILTTILYAITTFKPISSASSPTTDPLSY 67

Query: 190 XXXXXXXFHAIPFPSAFPYNLLMRVHTXXXXXXXXXXXFACMRRSAVPPDLHTFPFALK 366
                  F+ IP+PS F YN ++R HT           F+ MR  ++PPD ++FPF LK
Sbjct: 68  ALSI---FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLK 123


>ref|XP_006485061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61800-like [Citrus sinensis]
          Length = 523

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 34/119 (28%), Positives = 51/119 (42%)
 Frame = +1

Query: 10  LHRRCKSLRHLKAIHAHATVHGLTSLYPSPXXXXXXXXXXXXXXXXXNHRXXXXXXXXXX 189
           L +RCK+++ +  IHAH    GL  L+ SP                 +            
Sbjct: 6   LIKRCKTIKQIHQIHAHFLTKGL--LFLSPCHILTTILYAITTFKPISSASSPTTDPLSY 63

Query: 190 XXXXXXXFHAIPFPSAFPYNLLMRVHTXXXXXXXXXXXFACMRRSAVPPDLHTFPFALK 366
                  F+ IP+PS F YN ++R HT           F+ MR  ++PPD ++FPF L+
Sbjct: 64  ALSI---FNNIPYPSTFSYNTIIRAHTLFSSPLNAVVLFSQMRTVSIPPDFYSFPFLLR 119


>ref|XP_004503812.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61800-like [Cicer arietinum]
          Length = 494

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 34/119 (28%), Positives = 48/119 (40%)
 Frame = +1

Query: 10  LHRRCKSLRHLKAIHAHATVHGLTSLYPSPXXXXXXXXXXXXXXXXXNHRXXXXXXXXXX 189
           L ++CKS++ L  IHAH      T L P                    +           
Sbjct: 6   LIKQCKSIKKLHQIHAHTIT---TGLLPHHTLSILNSILSTLTSLLLPNNNISTCSNSSL 62

Query: 190 XXXXXXXFHAIPFPSAFPYNLLMRVHTXXXXXXXXXXXFACMRRSAVPPDLHTFPFALK 366
                  F++IP P+ F YN L+R+HT           F  +RR ++P D HTFP+ LK
Sbjct: 63  TTYALTLFNSIPNPTTFTYNTLIRIHTLLSSPLTAFHLFLSLRRLSLPLDFHTFPYILK 121


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