BLASTX nr result
ID: Zingiber25_contig00040274
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00040274
(726 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002454621.1| hypothetical protein SORBIDRAFT_04g034420 [S... 75 2e-11
ref|XP_004954053.1| PREDICTED: pentatricopeptide repeat-containi... 75 2e-11
dbj|BAD16914.1| pentatricopeptide (PPR) repeat-containing protei... 74 6e-11
gb|EEE57873.1| hypothetical protein OsJ_08529 [Oryza sativa Japo... 74 6e-11
gb|EAY87679.1| hypothetical protein OsI_09093 [Oryza sativa Indi... 74 6e-11
gb|AFW64322.1| hypothetical protein ZEAMMB73_176484 [Zea mays] 73 8e-11
ref|XP_006340426.1| PREDICTED: pentatricopeptide repeat-containi... 69 1e-09
ref|XP_004251424.1| PREDICTED: pentatricopeptide repeat-containi... 67 6e-09
ref|XP_003573036.1| PREDICTED: pentatricopeptide repeat-containi... 67 8e-09
dbj|BAK01831.1| predicted protein [Hordeum vulgare subsp. vulgare] 66 1e-08
ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 65 2e-08
ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containi... 65 2e-08
ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containi... 65 2e-08
emb|CBI24422.3| unnamed protein product [Vitis vinifera] 65 2e-08
ref|XP_003596872.1| Pentatricopeptide repeat-containing protein ... 64 5e-08
gb|ABD32771.1| Tetratricopeptide-like helical [Medicago truncatula] 64 5e-08
ref|XP_006417992.1| hypothetical protein EUTSA_v10009524mg [Eutr... 64 7e-08
gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays] 63 9e-08
gb|EMT11227.1| hypothetical protein F775_16951 [Aegilops tauschii] 62 2e-07
ref|XP_002889563.1| PDE247 [Arabidopsis lyrata subsp. lyrata] gi... 62 2e-07
>ref|XP_002454621.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
gi|241934452|gb|EES07597.1| hypothetical protein
SORBIDRAFT_04g034420 [Sorghum bicolor]
Length = 496
Score = 75.5 bits (184), Expect = 2e-11
Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Frame = -1
Query: 243 SPRDLVSWTSAMARHARRGCLLDASHTFGAMLS--AGVEPNYVTLVALVSACADFPSSPF 70
+PRD+VSWTS +AR AR+G L A+ + AMLS A PN VTL+ ++SACAD PSSP
Sbjct: 28 APRDVVSWTSTIARAARQGDLHAAAASLCAMLSSPAAPAPNDVTLLTVLSACADSPSSPL 87
Query: 69 ALSLGLAIHAQALK 28
A L L +HA+ALK
Sbjct: 88 ARPLALTLHARALK 101
>ref|XP_004954053.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Setaria italica]
Length = 496
Score = 75.1 bits (183), Expect = 2e-11
Identities = 42/74 (56%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Frame = -1
Query: 243 SPRDLVSWTSAMARHARRGCLLDASHTFGAMLS--AGVEPNYVTLVALVSACADFPSSPF 70
+PRD+VSWTSA+AR AR+G L A+ AMLS A PN VTL+ ++SACA PSSP
Sbjct: 28 APRDVVSWTSAIARAARQGDLPAAAAALSAMLSSPAAPAPNDVTLLTVLSACAGSPSSPL 87
Query: 69 ALSLGLAIHAQALK 28
A L L++HA ALK
Sbjct: 88 ARPLALSLHAHALK 101
>dbj|BAD16914.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group] gi|215704291|dbj|BAG93131.1|
unnamed protein product [Oryza sativa Japonica Group]
Length = 527
Score = 73.6 bits (179), Expect = 6e-11
Identities = 40/73 (54%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Frame = -1
Query: 240 PRDLVSWTSAMARHARRGCLLDASHTFGAMLS--AGVEPNYVTLVALVSACADFPSSPFA 67
PRD+ SWTSA+AR A++G L A+ AMLS A PN VTL+ ++SACAD PSSP A
Sbjct: 61 PRDVASWTSAIARPAKQGDLPAAAAALSAMLSSPAAPVPNDVTLLTVLSACADSPSSPLA 120
Query: 66 LSLGLAIHAQALK 28
L L++HA+ LK
Sbjct: 121 RRLALSVHARVLK 133
>gb|EEE57873.1| hypothetical protein OsJ_08529 [Oryza sativa Japonica Group]
Length = 500
Score = 73.6 bits (179), Expect = 6e-11
Identities = 40/73 (54%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Frame = -1
Query: 240 PRDLVSWTSAMARHARRGCLLDASHTFGAMLS--AGVEPNYVTLVALVSACADFPSSPFA 67
PRD+ SWTSA+AR A++G L A+ AMLS A PN VTL+ ++SACAD PSSP A
Sbjct: 61 PRDVASWTSAIARPAKQGDLPAAAAALSAMLSSPAAPVPNDVTLLTVLSACADSPSSPLA 120
Query: 66 LSLGLAIHAQALK 28
L L++HA+ LK
Sbjct: 121 RRLALSVHARVLK 133
>gb|EAY87679.1| hypothetical protein OsI_09093 [Oryza sativa Indica Group]
Length = 493
Score = 73.6 bits (179), Expect = 6e-11
Identities = 40/73 (54%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Frame = -1
Query: 240 PRDLVSWTSAMARHARRGCLLDASHTFGAMLS--AGVEPNYVTLVALVSACADFPSSPFA 67
PRD+ SWTSA+AR A++G L A+ AMLS A PN VTL+ ++SACAD PSSP A
Sbjct: 27 PRDVASWTSAIARPAKQGDLPAAAAALSAMLSSPAAPVPNDVTLLTVLSACADSPSSPLA 86
Query: 66 LSLGLAIHAQALK 28
L L++HA+ LK
Sbjct: 87 RRLALSVHARVLK 99
>gb|AFW64322.1| hypothetical protein ZEAMMB73_176484 [Zea mays]
Length = 496
Score = 73.2 bits (178), Expect = 8e-11
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Frame = -1
Query: 243 SPRDLVSWTSAMARHARRGCLLDASHTFGAMLS--AGVEPNYVTLVALVSACADFPSSPF 70
+PRD+VSWTS ++R AR+G L A+ + AM+S A PN VTL+ ++SACAD PSSP
Sbjct: 28 APRDVVSWTSTISRAARQGDLHAAAASLCAMVSSPAAPAPNDVTLLTVLSACADSPSSPL 87
Query: 69 ALSLGLAIHAQALK 28
A L L +HA+ALK
Sbjct: 88 ASPLALTLHARALK 101
>ref|XP_006340426.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Solanum tuberosum]
Length = 509
Score = 69.3 bits (168), Expect = 1e-09
Identities = 35/75 (46%), Positives = 48/75 (64%)
Frame = -1
Query: 252 HNSSPRDLVSWTSAMARHARRGCLLDASHTFGAMLSAGVEPNYVTLVALVSACADFPSSP 73
+ S+ SWTS +ARH + G L++A F M ++GVEPN++T V L+S CA FP+
Sbjct: 39 YRSNNDSTASWTSLIARHCKNGRLIEAVSEFTRMRNSGVEPNHITFVTLLSGCAHFPAQ- 97
Query: 72 FALSLGLAIHAQALK 28
ALSLG A+H A K
Sbjct: 98 -ALSLGSALHGYARK 111
>ref|XP_004251424.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Solanum lycopersicum]
Length = 507
Score = 67.0 bits (162), Expect = 6e-09
Identities = 34/75 (45%), Positives = 46/75 (61%)
Frame = -1
Query: 252 HNSSPRDLVSWTSAMARHARRGCLLDASHTFGAMLSAGVEPNYVTLVALVSACADFPSSP 73
+ S+ SWTS +ARH + G L++A F M ++GVEPN++T V L+S CA FP
Sbjct: 37 YRSNNDSTASWTSLIARHCKNGRLIEAVAEFTRMRNSGVEPNHITFVTLLSCCAHFPDQ- 95
Query: 72 FALSLGLAIHAQALK 28
ALS G A+H A K
Sbjct: 96 -ALSFGSALHGYARK 109
>ref|XP_003573036.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Brachypodium distachyon]
Length = 484
Score = 66.6 bits (161), Expect = 8e-09
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Frame = -1
Query: 240 PRDLVSWTSAMARHARRGCLLDASHTFGAMLS--AGVEPNYVTLVALVSACADFPSSPFA 67
PRD+VSWTSA+AR AR G L A+ AMLS A PN VTL+ ++SACA SS A
Sbjct: 28 PRDVVSWTSAIARPAREGDLQGAAAALSAMLSSPAAPPPNDVTLLTVLSACAGDSSSALA 87
Query: 66 LSLGLAIHAQALK 28
L L++HA A+K
Sbjct: 88 RPLALSLHALAVK 100
>dbj|BAK01831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 484
Score = 66.2 bits (160), Expect = 1e-08
Identities = 38/72 (52%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Frame = -1
Query: 237 RDLVSWTSAMARHARRGCLLDASHTFGAMLS--AGVEPNYVTLVALVSACADFPSSPFAL 64
RD+VSWT+A+AR AR G L + AMLS A PN VTL+ ++SACA PSSP A
Sbjct: 29 RDVVSWTAAIARPAREGDLPATAAALSAMLSSPAAPAPNDVTLLTVLSACAGAPSSPLAR 88
Query: 63 SLGLAIHAQALK 28
L L++HA A K
Sbjct: 89 PLALSLHALAAK 100
>ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05750, chloroplastic-like [Cucumis sativus]
Length = 525
Score = 65.5 bits (158), Expect = 2e-08
Identities = 33/68 (48%), Positives = 44/68 (64%)
Frame = -1
Query: 231 LVSWTSAMARHARRGCLLDASHTFGAMLSAGVEPNYVTLVALVSACADFPSSPFALSLGL 52
+V WTS++AR+ R G L +A+ F M AGVEPN++T + L+SACADFPS F + L
Sbjct: 57 IVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSL 116
Query: 51 AIHAQALK 28
H A K
Sbjct: 117 --HGYACK 122
>ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Cucumis sativus]
Length = 525
Score = 65.5 bits (158), Expect = 2e-08
Identities = 33/68 (48%), Positives = 44/68 (64%)
Frame = -1
Query: 231 LVSWTSAMARHARRGCLLDASHTFGAMLSAGVEPNYVTLVALVSACADFPSSPFALSLGL 52
+V WTS++AR+ R G L +A+ F M AGVEPN++T + L+SACADFPS F + L
Sbjct: 57 IVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSL 116
Query: 51 AIHAQALK 28
H A K
Sbjct: 117 --HGYACK 122
>ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 65.5 bits (158), Expect = 2e-08
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = -1
Query: 252 HNSSPRD-LVSWTSAMARHARRGCLLDASHTFGAMLSAGVEPNYVTLVALVSACADFPSS 76
H SP D +VSWTS++A H R G L +A+ F M AGV PN++T + L+SAC DFP
Sbjct: 46 HTHSPIDPIVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLE 105
Query: 75 PFALSLGLAIHAQALK 28
L G +IHA K
Sbjct: 106 --GLRFGGSIHAYVRK 119
Score = 57.8 bits (138), Expect = 4e-06
Identities = 30/73 (41%), Positives = 45/73 (61%)
Frame = -1
Query: 243 SPRDLVSWTSAMARHARRGCLLDASHTFGAMLSAGVEPNYVTLVALVSACADFPSSPFAL 64
S RD +SWTS + ++GC A F M AGVEP+YVT++++++ACA+ AL
Sbjct: 185 SERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLAACANLG----AL 240
Query: 63 SLGLAIHAQALKR 25
LGL I+ +K+
Sbjct: 241 GLGLWINRFVMKQ 253
>emb|CBI24422.3| unnamed protein product [Vitis vinifera]
Length = 502
Score = 65.5 bits (158), Expect = 2e-08
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = -1
Query: 252 HNSSPRD-LVSWTSAMARHARRGCLLDASHTFGAMLSAGVEPNYVTLVALVSACADFPSS 76
H SP D +VSWTS++A H R G L +A+ F M AGV PN++T + L+SAC DFP
Sbjct: 46 HTHSPIDPIVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLE 105
Query: 75 PFALSLGLAIHAQALK 28
L G +IHA K
Sbjct: 106 --GLRFGGSIHAYVRK 119
Score = 57.8 bits (138), Expect = 4e-06
Identities = 30/73 (41%), Positives = 45/73 (61%)
Frame = -1
Query: 243 SPRDLVSWTSAMARHARRGCLLDASHTFGAMLSAGVEPNYVTLVALVSACADFPSSPFAL 64
S RD +SWTS + ++GC A F M AGVEP+YVT++++++ACA+ AL
Sbjct: 185 SERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLAACANLG----AL 240
Query: 63 SLGLAIHAQALKR 25
LGL I+ +K+
Sbjct: 241 GLGLWINRFVMKQ 253
>ref|XP_003596872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240903|gb|ABD32761.1| Tetratricopeptide-like
helical [Medicago truncatula]
gi|355485920|gb|AES67123.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 517
Score = 63.9 bits (154), Expect = 5e-08
Identities = 31/75 (41%), Positives = 45/75 (60%)
Frame = -1
Query: 252 HNSSPRDLVSWTSAMARHARRGCLLDASHTFGAMLSAGVEPNYVTLVALVSACADFPSSP 73
H + VSWTS+++ H + L A+ F ML A VEPN++TL+ L+SACA PS
Sbjct: 45 HKPNSNQTVSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACAHSPSKT 104
Query: 72 FALSLGLAIHAQALK 28
+++ G A+H A K
Sbjct: 105 -SITFGAALHTHAFK 118
>gb|ABD32771.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 497
Score = 63.9 bits (154), Expect = 5e-08
Identities = 31/75 (41%), Positives = 45/75 (60%)
Frame = -1
Query: 252 HNSSPRDLVSWTSAMARHARRGCLLDASHTFGAMLSAGVEPNYVTLVALVSACADFPSSP 73
H + VSWTS+++ H + L A+ F ML A VEPN++TL+ L+SACA PS
Sbjct: 45 HKPNSNQTVSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACAHSPSKT 104
Query: 72 FALSLGLAIHAQALK 28
+++ G A+H A K
Sbjct: 105 -SITFGAALHTHAFK 118
>ref|XP_006417992.1| hypothetical protein EUTSA_v10009524mg [Eutrema salsugineum]
gi|557095763|gb|ESQ36345.1| hypothetical protein
EUTSA_v10009524mg [Eutrema salsugineum]
Length = 500
Score = 63.5 bits (153), Expect = 7e-08
Identities = 34/76 (44%), Positives = 45/76 (59%)
Frame = -1
Query: 255 IHNSSPRDLVSWTSAMARHARRGCLLDASHTFGAMLSAGVEPNYVTLVALVSACADFPSS 76
++ S+ VSWTS + +R G L DA+ F M AGVEPN++T +AL+S C DFPS
Sbjct: 34 LNQSTSETTVSWTSRITLLSRNGRLADAAKEFSDMRLAGVEPNHITFIALLSGCGDFPSG 93
Query: 75 PFALSLGLAIHAQALK 28
A LG +H A K
Sbjct: 94 SEA--LGDLLHGYACK 107
>gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 63.2 bits (152), Expect = 9e-08
Identities = 32/72 (44%), Positives = 49/72 (68%)
Frame = -1
Query: 240 PRDLVSWTSAMARHARRGCLLDASHTFGAMLSAGVEPNYVTLVALVSACADFPSSPFALS 61
P D+++W++ +A +A+RGC +A F M+ G EPN VT+++L+SACA S ALS
Sbjct: 357 PLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACA----SLGALS 412
Query: 60 LGLAIHAQALKR 25
G+ IHA +LK+
Sbjct: 413 QGMEIHAYSLKK 424
>gb|EMT11227.1| hypothetical protein F775_16951 [Aegilops tauschii]
Length = 903
Score = 61.6 bits (148), Expect = 2e-07
Identities = 32/73 (43%), Positives = 49/73 (67%)
Frame = -1
Query: 234 DLVSWTSAMARHARRGCLLDASHTFGAMLSAGVEPNYVTLVALVSACADFPSSPFALSLG 55
D+V+WT+ +A +A+RGC +A + F ML +G EPN +T+++++SACA S A S G
Sbjct: 376 DVVTWTAVIAGYAQRGCGQEALNVFRQMLFSGSEPNSITIISVLSACA----SLGAYSQG 431
Query: 54 LAIHAQALKRRRL 16
+ HA +LK R L
Sbjct: 432 METHAYSLKNRLL 444
>ref|XP_002889563.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
gi|297335405|gb|EFH65822.1| PDE247 [Arabidopsis lyrata
subsp. lyrata]
Length = 500
Score = 61.6 bits (148), Expect = 2e-07
Identities = 32/76 (42%), Positives = 45/76 (59%)
Frame = -1
Query: 255 IHNSSPRDLVSWTSAMARHARRGCLLDASHTFGAMLSAGVEPNYVTLVALVSACADFPSS 76
++ S+ + VSWTS + R G L +A+ F M AGVEPN++T +A++S C DFPS
Sbjct: 28 LNQSTSENTVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIAILSGCGDFPSG 87
Query: 75 PFALSLGLAIHAQALK 28
A LG +H A K
Sbjct: 88 SEA--LGDLLHGYACK 101