BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00040080
         (853 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006432869.1| hypothetical protein CICLE_v10000274mg [Citr...   168   3e-39
ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containi...   168   3e-39
emb|CBI29222.3| unnamed protein product [Vitis vinifera]              168   3e-39
gb|EMJ18352.1| hypothetical protein PRUPE_ppa001463mg [Prunus pe...   161   2e-37
ref|XP_004249905.1| PREDICTED: pentatricopeptide repeat-containi...   159   1e-36
ref|XP_006351033.1| PREDICTED: pentatricopeptide repeat-containi...   153   9e-35
gb|EOY25407.1| Tetratricopeptide repeat-like superfamily protein...   144   4e-32
ref|XP_002303480.2| pentatricopeptide repeat-containing family p...   142   1e-31
ref|XP_003548529.2| PREDICTED: pentatricopeptide repeat-containi...   140   6e-31
ref|XP_003628993.1| Pentatricopeptide repeat-containing protein ...   139   2e-30
gb|AHB18408.1| pentatricopeptide repeat-containing protein [Goss...   138   3e-30
ref|XP_004509525.1| PREDICTED: pentatricopeptide repeat-containi...   138   3e-30
ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containi...   134   5e-29
ref|XP_006282558.1| hypothetical protein CARUB_v10004123mg [Caps...   133   9e-29
sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-c...   129   1e-27
emb|CAA18631.1| putative protein [Arabidopsis thaliana] gi|72687...   129   1e-27
ref|NP_567587.1| pentatricopeptide repeat-containing protein [Ar...   129   1e-27
ref|XP_006413978.1| hypothetical protein EUTSA_v10024401mg [Eutr...   129   2e-27
ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arab...   128   3e-27
gb|ESW28323.1| hypothetical protein PHAVU_003G277400g [Phaseolus...   127   5e-27

>ref|XP_006432869.1| hypothetical protein CICLE_v10000274mg [Citrus clementina]
           gi|568835123|ref|XP_006471629.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X1 [Citrus sinensis]
           gi|568835125|ref|XP_006471630.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X2 [Citrus sinensis]
           gi|557534991|gb|ESR46109.1| hypothetical protein
           CICLE_v10000274mg [Citrus clementina]
          Length = 833

 Score =  168 bits (425), Expect = 3e-39
 Identities = 98/240 (40%), Positives = 140/240 (58%), Gaps = 6/240 (2%)
 Frame = +2

Query: 143 ISPAPFDSSLCQETLSRLCPRRLERILLDLGSSLIRPKPALRFFSFASDSCAFRFTPRSY 322
           +S    D S C+  L  L P+  + +   + S+ + PK AL+FF FAS SC FRFT RSY
Sbjct: 62  LSKQSLDPSKCKLFLPNLSPQEFDTLFFSIRSN-VNPKTALKFFYFASQSCNFRFTVRSY 120

Query: 323 AILLHSLLRSNLTDASXXXXXXXXDPRSTVALFLDDPDQRFREIVLAVVD----TAPSRD 490
            +L+  LL SNL   +        D +  V L+  +P  R  EI   +VD    + P+  
Sbjct: 121 CLLIRLLLFSNLLSPARLLLIRLIDGKMPV-LYASNPSIRHIEIASQMVDLNVTSEPALG 179

Query: 491 SPAFDLLVHLCCTQLRLDDGG--IVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQM 664
               DLLVH+ CTQ +    G  I VF I + +G+ PSLKTCNFL++SL K+  ++    
Sbjct: 180 VQIADLLVHVYCTQFKNLGFGYAIDVFSIFSNKGIFPSLKTCNFLLNSLVKANEVQKGIE 239

Query: 665 VFDRMRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
           VF+ M + VSP+V+ ++  I+A CKR R+E A+ LF++ME  G  PNVVTYN++I G C+
Sbjct: 240 VFETMCRGVSPDVFLFSTAINAFCKRGRIEDAIGLFTKMEELGIAPNVVTYNNIIHGLCR 299



 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 38/86 (44%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
 Frame = +2

Query: 593 PSLKTCNFLMSSLTKSKNLEDAQMVFDRM--RKFVSPNVYSYTMLIDALCKRRRVEQAMA 766
           PSL T + L++ L K +  +DA  V   M  R FV PN   Y  LID  CK+  + +A+ 
Sbjct: 320 PSLITYSILINGLIKLEKFDDANFVLKEMSVRGFV-PNYVVYNTLIDGYCKKGNISEALK 378

Query: 767 LFSEMESSGTLPNVVTYNSLIDGFCK 844
           +  +M S G  PN VT+NSLI GFCK
Sbjct: 379 IRDDMVSKGMSPNSVTFNSLIHGFCK 404



 Score = 63.5 bits (153), Expect = 9e-08
 Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
 Frame = +2

Query: 581 QGLCPSLKTCNFLMSSLTKSKNLEDAQMVFDRMRKF-VSPNVYSYTMLIDALCKRRRVEQ 757
           +G+ P+  T + L+  L     +EDA+ +FD MRK  + PNV  YT LI   CK  ++++
Sbjct: 666 RGILPTSVTYSSLIHGLCNIGLIEDAKCLFDEMRKEGLLPNVACYTALIGGYCKLGQMDE 725

Query: 758 AMALFSEMESSGTLPNVVTYNSLIDGFCK 844
           A ++  EM S    PN +TY  +I G+CK
Sbjct: 726 AESVLQEMASINIHPNKITYTIMIGGYCK 754



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
 Frame = +2

Query: 488 DSPAFDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMV 667
           D   ++ L+  CC   + ++G  +   +I  +G+ P   T N L+  L     +E+A  +
Sbjct: 531 DKVTYNTLILGCCKDGKPEEGFKLKEDMIK-RGIQPDNYTYNLLLHGLCSLGKMEEAIEL 589

Query: 668 FDRMRKFV-SPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
           ++  ++ V  P++Y+Y ++ID  CK  ++E+   LF+EM S     N V YN+LI  +CK
Sbjct: 590 WEECKRTVFGPDIYTYGVMIDGFCKADKIEEGETLFNEMISKKMELNPVVYNTLIRAYCK 649



 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
 Frame = +2

Query: 491  SPAFDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMVF 670
            S  +  L+H  C    ++D   + F  +  +GL P++     L+    K   +++A+ V 
Sbjct: 672  SVTYSSLIHGLCNIGLIEDAKCL-FDEMRKEGLLPNVACYTALIGGYCKLGQMDEAESVL 730

Query: 671  DRMRKF-VSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
              M    + PN  +YT++I   CK   +++A  L + M   G  P+ +TYN  +DG CK
Sbjct: 731  QEMASINIHPNKITYTIMIGGYCKLGDMKEAAKLLNVMAEKGISPDSITYNVFMDGHCK 789


>ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  168 bits (425), Expect = 3e-39
 Identities = 97/240 (40%), Positives = 135/240 (56%), Gaps = 6/240 (2%)
 Frame = +2

Query: 143 ISPAPFDSSLCQETLSRLCPRRLERILLDLGSSLIRPKPALRFFSFASDSCAFRFTPRSY 322
           +S    DS+ C++ +  L P + + +   +  + + PK AL FF FASDSC FRFT RSY
Sbjct: 124 LSNPSLDSTQCKQLIPHLSPHQFDSVFFSVRRN-VNPKTALNFFYFASDSCGFRFTLRSY 182

Query: 323 AILLHSLLRSNLTDASXXXXXXXXDPRSTVALFLDDPDQRFREIVLAVVDTAPSRDS--- 493
            +L+ SL+ S     +        D +  V     DP  R  EI  A+ D     +S   
Sbjct: 183 CVLMRSLIVSGFVSPARLLLIRLIDRKLPV--LFGDPKNRHIEIASAMADLNEVGESGVA 240

Query: 494 -PAFDLLVHLCCTQLRLDD--GGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQM 664
             A DLL+H+ CTQ R       I VF  +  +G+ P++KTC FL+SSL K+  LE +  
Sbjct: 241 VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYW 300

Query: 665 VFDRMRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
           VF+ MR+ VSP+VY ++  I+A CK  +VE A+ LF +ME  G  PNVVTYN+LI G CK
Sbjct: 301 VFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCK 360



 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 34/120 (28%), Positives = 68/120 (56%), Gaps = 1/120 (0%)
 Frame = +2

Query: 488 DSPAFDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMV 667
           D   ++ L+  CC + ++++G   + G +  QG+ P   T N L+  + +   L++A  +
Sbjct: 592 DKITYNTLISGCCKEGKVEEG-FKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNL 650

Query: 668 FDRMR-KFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
           ++  + + + PNVY+Y ++ID  CK  ++E+   LF+E+ +     N V YN+LI  +C+
Sbjct: 651 WNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCR 710



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
 Frame = +2

Query: 500  FDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMVFDRM 679
            + +++   C   ++++G  +   ++T Q L  +    N L+ +  ++ N  +A  + D M
Sbjct: 666  YGVMIDGYCKADKIEEGEKLFTELLT-QNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDM 724

Query: 680  R-KFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
            R K + P   +Y+ LI  +C   R+E A  L  EM   G LPNVV Y +LI G+CK
Sbjct: 725  RSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCK 780



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
 Frame = +2

Query: 500  FDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMVFDRM 679
            +  L+H  C   R++D   ++   +  +GL P++     L+    K   ++    V   M
Sbjct: 736  YSSLIHGMCNIGRMEDAKCLI-DEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEM 794

Query: 680  RKF-VSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCKK 847
              + + PN  +YT++ID   K   ++ A  L  EM   G +P+ VTYN L +GFCK+
Sbjct: 795  SSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKE 851



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
 Frame = +2

Query: 500 FDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMVF-DR 676
           ++ L+H  C    LD+       ++   G+  +L T + L++ L K +   +A  V  + 
Sbjct: 351 YNNLIHGLCKHGNLDEAFRFKEKMVK-DGVNATLITYSVLINGLMKLEKFNEANSVLKET 409

Query: 677 MRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
           + K  +PN   Y  LID  CK   +  A+ +  +M S G  PN VT NS+I GFCK
Sbjct: 410 LEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCK 465


>emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  168 bits (425), Expect = 3e-39
 Identities = 97/240 (40%), Positives = 135/240 (56%), Gaps = 6/240 (2%)
 Frame = +2

Query: 143 ISPAPFDSSLCQETLSRLCPRRLERILLDLGSSLIRPKPALRFFSFASDSCAFRFTPRSY 322
           +S    DS+ C++ +  L P + + +   +  + + PK AL FF FASDSC FRFT RSY
Sbjct: 57  LSNPSLDSTQCKQLIPHLSPHQFDSVFFSVRRN-VNPKTALNFFYFASDSCGFRFTLRSY 115

Query: 323 AILLHSLLRSNLTDASXXXXXXXXDPRSTVALFLDDPDQRFREIVLAVVDTAPSRDS--- 493
            +L+ SL+ S     +        D +  V     DP  R  EI  A+ D     +S   
Sbjct: 116 CVLMRSLIVSGFVSPARLLLIRLIDRKLPV--LFGDPKNRHIEIASAMADLNEVGESGVA 173

Query: 494 -PAFDLLVHLCCTQLRLDD--GGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQM 664
             A DLL+H+ CTQ R       I VF  +  +G+ P++KTC FL+SSL K+  LE +  
Sbjct: 174 VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYW 233

Query: 665 VFDRMRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
           VF+ MR+ VSP+VY ++  I+A CK  +VE A+ LF +ME  G  PNVVTYN+LI G CK
Sbjct: 234 VFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCK 293



 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 34/120 (28%), Positives = 68/120 (56%), Gaps = 1/120 (0%)
 Frame = +2

Query: 488 DSPAFDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMV 667
           D   ++ L+  CC + ++++G   + G +  QG+ P   T N L+  + +   L++A  +
Sbjct: 525 DKITYNTLISGCCKEGKVEEG-FKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNL 583

Query: 668 FDRMR-KFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
           ++  + + + PNVY+Y ++ID  CK  ++E+   LF+E+ +     N V YN+LI  +C+
Sbjct: 584 WNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCR 643



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
 Frame = +2

Query: 500 FDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMVFDRM 679
           + +++   C   ++++G  +   ++T Q L  +    N L+ +  ++ N  +A  + D M
Sbjct: 599 YGVMIDGYCKADKIEEGEKLFTELLT-QNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDM 657

Query: 680 R-KFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
           R K + P   +Y+ LI  +C   R+E A  L  EM   G LPNVV Y +LI G+CK
Sbjct: 658 RSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCK 713



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
 Frame = +2

Query: 500  FDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMVFDRM 679
            +  L+H  C   R++D   ++   +  +GL P++     L+    K   ++    V   M
Sbjct: 669  YSSLIHGMCNIGRMEDAKCLI-DEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEM 727

Query: 680  RKF-VSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCKK 847
              + + PN  +YT++ID   K   ++ A  L  EM   G +P+ VTYN L +GFCK+
Sbjct: 728  SSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKE 784



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
 Frame = +2

Query: 500 FDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMVF-DR 676
           ++ L+H  C    LD+       ++   G+  +L T + L++ L K +   +A  V  + 
Sbjct: 284 YNNLIHGLCKHGNLDEAFRFKEKMVK-DGVNATLITYSVLINGLMKLEKFNEANSVLKET 342

Query: 677 MRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
           + K  +PN   Y  LID  CK   +  A+ +  +M S G  PN VT NS+I GFCK
Sbjct: 343 LEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCK 398


>gb|EMJ18352.1| hypothetical protein PRUPE_ppa001463mg [Prunus persica]
          Length = 821

 Score =  161 bits (408), Expect = 2e-37
 Identities = 94/240 (39%), Positives = 138/240 (57%), Gaps = 6/240 (2%)
 Frame = +2

Query: 143 ISPAPFDSSLCQETLSRLCPRRLERILLDLGSSLIRPKPALRFFSFASDSCAFRFTPRSY 322
           +S    DSS C+  +  L     +R+   + S+ + PK AL FF FAS+S  F+FT RS+
Sbjct: 61  LSKPSLDSSKCKALIPLLSSHEFDRVFCSISSN-VNPKTALHFFYFASESFKFQFTVRSF 119

Query: 323 AILLHSLLRSNLTDASXXXXXXXXDPRSTVALFLDDPDQRFREIVLAVVD----TAPSRD 490
            +L+  L+ SNL   +        D    V +   + +QR  EI +A++D    +     
Sbjct: 120 CVLVRLLILSNLVSPARLLLIRLID--GNVPVLYANHNQRHMEIAIAMLDLNTVSTQGLG 177

Query: 491 SPAFDLLVHLCCTQLRLDDGGIVV--FGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQM 664
             A DLL+H+ CTQ +    G  +  F I + +G+ PSLKTCNFL+SSL K+  L  +  
Sbjct: 178 VQALDLLIHVYCTQFKNMGFGYAIDAFVIFSKKGVFPSLKTCNFLLSSLVKANELHKSYD 237

Query: 665 VFDRMRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
           VF+ M + VSP+VY +T  I+A CK  +V+ A+ LFS+ME  G +PNVVTYN++I G CK
Sbjct: 238 VFEVMCRGVSPDVYLFTTAINAFCKGGKVDDAIGLFSKMEGLGIVPNVVTYNNIIHGLCK 297



 Score = 70.9 bits (172), Expect = 6e-10
 Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
 Frame = +2

Query: 455 VLAVVDTAPSRDSPAFDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLT 634
           V  V+    S D   F   ++  C   ++DD  I +F  + G G+ P++ T N ++  L 
Sbjct: 238 VFEVMCRGVSPDVYLFTTAINAFCKGGKVDDA-IGLFSKMEGLGIVPNVVTYNNIIHGLC 296

Query: 635 KSKNLEDAQMVFDRM-RKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVV 811
           KS+ L +A     +M    VSP++ +Y++LI+ L K  +   A  +  EM + G +PN V
Sbjct: 297 KSRRLVEAFQFKKKMIENNVSPSLITYSVLINGLIKLEKFHDANCVLKEMCNRGFVPNEV 356

Query: 812 TYNSLIDGFCK 844
            YN+LIDG+CK
Sbjct: 357 VYNTLIDGYCK 367



 Score = 63.9 bits (154), Expect = 7e-08
 Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
 Frame = +2

Query: 488 DSPAFDLLVHLCCTQLRLDDGGIVVFGI---ITGQGLCPSLKTCNFLMSSLTKSKNLEDA 658
           +S  ++ L+   CT    D       G+   +  +G+ PS  T + L+  L    ++EDA
Sbjct: 634 NSVVYNTLIRAYCT----DGNMTAALGLRCDMKKKGIQPSCGTYSSLIHGLCNIGDVEDA 689

Query: 659 QMVFDRMRK-FVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDG 835
           + + D MRK  + PNV  YT LI   CK  ++++  + F EM S    PN +TY  +IDG
Sbjct: 690 KCLLDEMRKDGLLPNVVCYTALIHGYCKLGQMDKVRSAFLEMSSDNIQPNKITYTVMIDG 749

Query: 836 FCK 844
           + K
Sbjct: 750 YSK 752



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 41/119 (34%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
 Frame = +2

Query: 500 FDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMVFDRM 679
           ++ ++H  C   RL +       +I    + PSL T + L++ L K +   DA  V   M
Sbjct: 288 YNNIIHGLCKSRRLVEAFQFKKKMIENN-VSPSLITYSVLINGLIKLEKFHDANCVLKEM 346

Query: 680 --RKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCKKN 850
             R FV PN   Y  LID  CK   + +A+ +   M S+G  PN VT NSL+ GFC+ +
Sbjct: 347 CNRGFV-PNEVVYNTLIDGYCKTGNISEALKIRDNMLSNGLTPNSVTLNSLLQGFCRSD 404



 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 35/119 (29%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
 Frame = +2

Query: 488 DSPAFDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMV 667
           D  +++ L+  CC + ++++G   +   +  QG+ P   T N LM  L     ++DA  +
Sbjct: 529 DRISYNTLILGCCKEGKVEEG-FKLKEEMAKQGIEPDTYTYNLLMHGLCNMGKVDDAVKL 587

Query: 668 FDRMR-KFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFC 841
           +D    + + PNVY+Y ++ID  C+  R+++   LFS++ +     N V YN+LI  +C
Sbjct: 588 WDECENRGLVPNVYTYGVMIDGYCQAGRMKEGENLFSKLVNKEVELNSVVYNTLIRAYC 646



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 32/113 (28%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
 Frame = +2

Query: 509 LVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMVFDRMRKF 688
           L+H  C    + +  +++   +  +GL     + N L+    K   +E+   + + M K 
Sbjct: 501 LIHGLCESRSMQEV-VMLLKPMLERGLVLDRISYNTLILGCCKEGKVEEGFKLKEEMAKQ 559

Query: 689 -VSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
            + P+ Y+Y +L+  LC   +V+ A+ L+ E E+ G +PNV TY  +IDG+C+
Sbjct: 560 GIEPDTYTYNLLMHGLCNMGKVDDAVKLWDECENRGLVPNVYTYGVMIDGYCQ 612


>ref|XP_004249905.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Solanum lycopersicum]
          Length = 839

 Score =  159 bits (402), Expect = 1e-36
 Identities = 97/240 (40%), Positives = 139/240 (57%), Gaps = 6/240 (2%)
 Frame = +2

Query: 143 ISPAPFDSSLCQETLSRLCPRRLERILLDLGSSLIRPKPALRFFSFASDSCAFRFTPRSY 322
           +S  P DS   ++ L+ L P++ + I L++ SSL +P   L+FF  AS +C+F FT RSY
Sbjct: 70  LSDPPVDSLKIKDLLTLLNPQQFDAIFLEIHSSL-KPLNVLKFFHVASGTCSFSFTVRSY 128

Query: 323 AILLHSLLRSNLTDASXXXXXXXXDPRSTVALFLDDPDQRFREIVLAVVDTAPSRDSPA- 499
             L+  L+ SN  DA               ALF D   Q+  E+ +++ + +   D    
Sbjct: 129 CTLVRLLIASN-HDAPARLLLIRLIDGKLPALF-DSLQQKHVEVAVSLAELSGVSDFGVA 186

Query: 500 ---FDLLVHLCCTQLRLD--DGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQM 664
              FDLL+HLCCTQ +    D  + VF  +  +G+ PSLKTCNFL+SSL K   L  +  
Sbjct: 187 VRTFDLLLHLCCTQFKSVGFDAALDVFRSLASRGVYPSLKTCNFLLSSLVKENELWKSYE 246

Query: 665 VFDRMRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
           VF+ ++  V P+VY ++  I+A CK  +VE+A  LF +ME+ G LPNVVTYN+LI G CK
Sbjct: 247 VFEILKDGVKPDVYLFSTAINAFCKGGKVEEAQELFRKMENMGILPNVVTYNNLIHGLCK 306



 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 39/120 (32%), Positives = 68/120 (56%), Gaps = 1/120 (0%)
 Frame = +2

Query: 488 DSPAFDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMV 667
           DS  ++ L+   C +  LD G  ++   +  QG+ P + T N L+  L +   +++A ++
Sbjct: 538 DSMTYNTLICAFCKEGNLD-GAFMLREEMVKQGIAPDVSTYNVLLHGLGEKGKVDEALLL 596

Query: 668 FDRMR-KFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
           +D  R K +  ++Y+Y  LI+ LCK  ++E+   LF EM   G  PN++ YN+LI  FC+
Sbjct: 597 WDECRSKGLVCDIYTYGALINGLCKADQLEKGRDLFHEMLRQGLAPNLIVYNTLIGAFCR 656



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
 Frame = +2

Query: 500 FDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMVFDRM 679
           ++ L+H  C    L+D  ++   +I   G+ PS+ T + L++ L K +  ++A  V   M
Sbjct: 297 YNNLIHGLCKNCNLEDAFLLKEEMILN-GVNPSIVTYSMLINCLMKLEKFDEADCVLKEM 355

Query: 680 -RKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCKKN 850
             K + PN   Y  +I+  C    +++A+ + +EM + G  PN  TYNSLI GFCK N
Sbjct: 356 SNKGLVPNEVLYNTIINGYCSAGDIQKALKVRNEMLTKGIFPNSATYNSLIKGFCKVN 413



 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 34/95 (35%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
 Frame = +2

Query: 560 VFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMVFDRM-RKFVSPNVYSYTMLIDALC 736
           +F  +   G+ P++ T N L+  L K+ NLEDA ++ + M    V+P++ +Y+MLI+ L 
Sbjct: 281 LFRKMENMGILPNVVTYNNLIHGLCKNCNLEDAFLLKEEMILNGVNPSIVTYSMLINCLM 340

Query: 737 KRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFC 841
           K  + ++A  +  EM + G +PN V YN++I+G+C
Sbjct: 341 KLEKFDEADCVLKEMSNKGLVPNEVLYNTIINGYC 375



 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 38/117 (32%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
 Frame = +2

Query: 488 DSPAFDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMV 667
           D   +++L+H    + ++D+  ++++     +GL   + T   L++ L K+  LE  + +
Sbjct: 573 DVSTYNVLLHGLGEKGKVDEA-LLLWDECRSKGLVCDIYTYGALINGLCKADQLEKGRDL 631

Query: 668 FDRM-RKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDG 835
           F  M R+ ++PN+  Y  LI A C+   V++A+ L  ++ S G LPNVVTY+SLI G
Sbjct: 632 FHEMLRQGLAPNLIVYNTLIGAFCRNGNVKEALKLRDDIRSRGILPNVVTYSSLIHG 688



 Score = 60.5 bits (145), Expect = 8e-07
 Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
 Frame = +2

Query: 488 DSPAFDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMV 667
           D   +  L++  C   +L+ G  + F  +  QGL P+L   N L+ +  ++ N+++A  +
Sbjct: 608 DIYTYGALINGLCKADQLEKGRDL-FHEMLRQGLAPNLIVYNTLIGAFCRNGNVKEALKL 666

Query: 668 FDRMR-KFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
            D +R + + PNV +Y+ LI  +     +E A  L   M   G LP+VV Y +LI G+CK
Sbjct: 667 RDDIRSRGILPNVVTYSSLIHGMSNIGLIEDAENLIDGMRKEGVLPDVVCYTALIGGYCK 726


>ref|XP_006351033.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Solanum tuberosum]
          Length = 928

 Score =  153 bits (386), Expect = 9e-35
 Identities = 94/240 (39%), Positives = 138/240 (57%), Gaps = 6/240 (2%)
 Frame = +2

Query: 143 ISPAPFDSSLCQETLSRLCPRRLERILLDLGSSLIRPKPALRFFSFASDSCAFRFTPRSY 322
           +S  P DS   ++ L+ L P++ + I L++ SSL +P   L+FF  AS +C F F+ RSY
Sbjct: 159 LSNPPVDSLKIKDLLTLLTPQQFDAIFLEIYSSL-KPLNVLKFFHVASGTCGFSFSVRSY 217

Query: 323 AILLHSLLRSNLTDASXXXXXXXXDPRSTVALFLDDPDQRFREIVLAVVDTAPSRDSPA- 499
             LL  L+ SN    +        D +   ALF D   Q+  E+ +++ + +   D    
Sbjct: 218 CTLLRLLVASNHDVPARLLLIRLIDGKLP-ALF-DTSQQKHVEVAVSLAELSGVSDFGVA 275

Query: 500 ---FDLLVHLCCTQLRLD--DGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQM 664
              FDLL+HLCCTQ +    D  + VF  +  +G+ PSLKTCNFL+SSL K   L  +  
Sbjct: 276 VRTFDLLLHLCCTQFKNVGFDAALDVFRSLASRGVYPSLKTCNFLLSSLVKENELWKSYE 335

Query: 665 VFDRMRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
           VF  ++  V P+VY ++  I+A CK  +V++A  LF +ME+ G +PNVVTYN+LI G CK
Sbjct: 336 VFGILKDGVEPDVYLFSTAINAFCKGGKVDEAKELFRKMENIGIVPNVVTYNNLIHGLCK 395



 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
 Frame = +2

Query: 500 FDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMVFDRM 679
           ++ L+H  C    L+D  ++   +I   G+ PS+ T + L++ L K +  ++A  V   M
Sbjct: 386 YNNLIHGLCKNCNLEDAFLLKEEMILN-GVNPSIVTYSMLINCLMKLEKFDEADCVLKEM 444

Query: 680 -RKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCKKN 850
             K + PN   Y  +I+  C    +++A+ + +EM + G LPN  TYNSLI GFCK N
Sbjct: 445 SNKGLVPNDVLYNTIINGYCSAGDIQKALKVRNEMLTKGILPNSATYNSLIKGFCKVN 502



 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 39/120 (32%), Positives = 68/120 (56%), Gaps = 1/120 (0%)
 Frame = +2

Query: 488  DSPAFDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMV 667
            D   +++L+H    + + D+  ++++     +GL   + T   L++ L K+  LE  + +
Sbjct: 662  DVSTYNVLLHGLGEKGKTDEA-LLLWDECLSKGLVCDIYTYGALINGLCKADQLEKGRDL 720

Query: 668  FDRM-RKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
            F  M R+ ++PN+  Y  LI A C+   V++A+ L  ++ S G LPNVVTY+SLI G  K
Sbjct: 721  FHEMLRQGLAPNLIIYNTLIGAFCRNGNVKEALKLRDDIRSRGILPNVVTYSSLIHGMSK 780



 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 39/120 (32%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
 Frame = +2

Query: 488  DSPAFDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMV 667
            D   +  L++  C   +L+ G  + F  +  QGL P+L   N L+ +  ++ N+++A  +
Sbjct: 697  DIYTYGALINGLCKADQLEKGRDL-FHEMLRQGLAPNLIIYNTLIGAFCRNGNVKEALKL 755

Query: 668  FDRMR-KFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
             D +R + + PNV +Y+ LI  + K   +E A  L   M   G LP+VV Y +LI G+CK
Sbjct: 756  RDDIRSRGILPNVVTYSSLIHGMSKIGLIEDAENLIDGMHKEGVLPDVVCYTALIGGYCK 815


>gb|EOY25407.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
           1 [Theobroma cacao] gi|508778152|gb|EOY25408.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508778153|gb|EOY25409.1| Tetratricopeptide
           repeat-like superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508778154|gb|EOY25410.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508778155|gb|EOY25411.1| Tetratricopeptide
           repeat-like superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508778156|gb|EOY25412.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
          Length = 845

 Score =  144 bits (363), Expect = 4e-32
 Identities = 95/243 (39%), Positives = 130/243 (53%), Gaps = 9/243 (3%)
 Frame = +2

Query: 143 ISPAPFDSSLCQETLSRLCPRRLERILLDLGSSLIRPKPALRFFSFASDSCAFRFTPRSY 322
           +S +  DSS C++ L  L P   +R    + S L  PK  L FF  AS S  FRFT RSY
Sbjct: 75  LSKSSLDSSKCKQLLPLLSPLDFDRFFSAISSHL-NPKTTLHFFYLASQSFNFRFTLRSY 133

Query: 323 AILLHSLLRSNLTDASXXXXXXXXDPRSTVALFLDDPDQR---FREIVLAVVD-TAPSRD 490
            IL+  LL +N +  +        D +    L L  P+       +I  A+ D    S+ 
Sbjct: 134 CILILLLLLANHSSPARLLFIRLIDGK----LPLSSPNNTTIDHIQITTALADLNTLSKG 189

Query: 491 SP---AFDLLVHLCCTQLRLDD--GGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLED 655
            P     D+L+HL CTQ +       I VF  +  +G+ PS KTCNF +SSL K+  L+ 
Sbjct: 190 VPRVMGVDMLLHLYCTQFKNAGFTSAIDVFFTLADKGMFPSSKTCNFFLSSLVKANELQK 249

Query: 656 AQMVFDRMRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDG 835
              VF+ + +FVS +VY  T +I+A CK  R++ A ALFS ME+ G  PNVVTYN++I G
Sbjct: 250 TYQVFETLSRFVSLDVYLCTTMINAFCKGGRIQDAFALFSRMENLGIAPNVVTYNNIIHG 309

Query: 836 FCK 844
            CK
Sbjct: 310 LCK 312



 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
 Frame = +2

Query: 500 FDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMVFDRM 679
           ++ ++H  C   RLD+    +   +T  G+ P+L T + L++ L K    E+A  V   M
Sbjct: 303 YNNIIHGLCKSGRLDEA-FQLKQNMTRHGVQPNLITFSVLINGLIKLNKFEEANFVLKEM 361

Query: 680 R-KFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
             K   PN   Y  LID  CK   +++A+ +  EM S G +PN VT NSL+ G C+
Sbjct: 362 SGKGFVPNEVVYNTLIDGYCKMGNIDEALGVRDEMLSKGMIPNSVTLNSLVQGLCR 417



 Score = 60.5 bits (145), Expect = 8e-07
 Identities = 27/89 (30%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
 Frame = +2

Query: 581 QGLCPSLKTCNFLMSSLTKSKNLEDAQMVFDRMRKF-VSPNVYSYTMLIDALCKRRRVEQ 757
           +G+ P + T N L+  ++    ++DA  ++D  ++  +  NVY+Y +++D  CK  ++E+
Sbjct: 574 RGIQPDIYTYNLLLHGISNMGKMKDATNIWDECKRHGIVSNVYTYAIMMDGYCKVDKIEE 633

Query: 758 AMALFSEMESSGTLPNVVTYNSLIDGFCK 844
              LF E+ ++    N V YN+LI  +CK
Sbjct: 634 CQNLFDELVTNKVDLNAVVYNTLIRAYCK 662



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
 Frame = +2

Query: 581 QGLCPSLKTCNFLMSSLTKSKNLEDAQMVFDRMRKF-VSPNVYSYTMLIDALCKRRRVEQ 757
           +G+ P++ T + L+  L      EDA+ +   MR   + PNV  YT L+   C+  ++++
Sbjct: 679 KGIPPTICTYSSLIHGLCNMGLPEDARQLLLEMRGLGLVPNVVCYTALLGGYCRLGQMDK 738

Query: 758 AMALFSEMESSGTLPNVVTYNSLIDGFCK 844
             +L  EM SS   PN +TY  +IDG+CK
Sbjct: 739 VGSLLQEMSSSNVQPNKITYTVMIDGYCK 767


>ref|XP_002303480.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550342907|gb|EEE78459.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 842

 Score =  142 bits (359), Expect = 1e-31
 Identities = 88/241 (36%), Positives = 132/241 (54%), Gaps = 7/241 (2%)
 Frame = +2

Query: 143 ISPAPFDSSLCQETLSRLCPRRLERILLDLGSSLIRPKPALRFFSFASDSCAFRFTPRSY 322
           +S    D + C+E +  L P+  +   L L S+ + PK AL FF F S++C FRFT RSY
Sbjct: 71  LSNPSLDCAKCKELVPHLSPQEFDSCFLALKSN-VNPKTALNFFHFVSETCKFRFTARSY 129

Query: 323 AILLHSLLRSNLTDASXXXXXXXXDPRSTVALFLDDPDQRFREIVLAVVDT----APSRD 490
            +L+H L+ ++L   +        D +   A +  + + R  EI   + D      P   
Sbjct: 130 CVLIHLLVGNDLLSPARLLLIRLIDGK-VPAFYARNFESRHFEIAQIMADFNLVFEPVIG 188

Query: 491 SPAFDLLVHLCCTQLRLDDGGIV--VFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQM 664
               DLLVH+  TQ +    G    VF ++  +GL PSLKTC FL+SSL K+  L+ +  
Sbjct: 189 VKIADLLVHVYSTQFKHLGFGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYE 248

Query: 665 VFDRM-RKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFC 841
           V+D +    + P+V+ ++ +I+A CK  R + A+ LFS+ME  G  PNVVTYN++I G C
Sbjct: 249 VYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLC 308

Query: 842 K 844
           K
Sbjct: 309 K 309



 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 40/120 (33%), Positives = 70/120 (58%), Gaps = 1/120 (0%)
 Frame = +2

Query: 488 DSPAFDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMV 667
           D   F  +++  C   R DD  I +F  +   G+ P++ T N ++  L KS  L++A   
Sbjct: 261 DVHLFSTMINAFCKGHREDDA-IGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRF 319

Query: 668 FDRM-RKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
            ++M ++ VSP++ +Y++ I+ L K  ++++A  +  EM   G +PN V YN+LIDG+CK
Sbjct: 320 KEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCK 379



 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
 Frame = +2

Query: 500 FDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMVFDRM 679
           ++ ++H  C   RLD+       ++  + + PSL T +  ++ L K + +++A  V   M
Sbjct: 300 YNNIIHGLCKSGRLDEAYRFKEKMVK-EKVSPSLITYSVFINGLIKLEKIDEANCVLKEM 358

Query: 680 RKF-VSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCKKN 850
            +    PN   Y  LID  CK   + +A+ +  +M S G  PN VT NSLI GFCK +
Sbjct: 359 SELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSD 416



 Score = 63.9 bits (154), Expect = 7e-08
 Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 36/129 (27%)
 Frame = +2

Query: 572 ITGQGLCPSLKTCNFLMSSLTKSKNLEDAQ----------MVFDRM-------------- 679
           + G+G  P++ T N L+  L K+ N+++            +VFDR+              
Sbjct: 498 LLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGK 557

Query: 680 ------------RKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNS 823
                       +K + P++Y++ +L+  LC   ++++A  L+ E + +G +PNV TY  
Sbjct: 558 VKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGV 617

Query: 824 LIDGFCKKN 850
           +IDG+CK N
Sbjct: 618 MIDGYCKAN 626



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
 Frame = +2

Query: 488 DSPAFDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMV 667
           D   ++ L+  CC + ++ +G  +   ++  +G+ P + T N L+  L  +  +++A  +
Sbjct: 541 DRITYNTLISGCCKEGKVKEGFELKEEMVK-KGIQPDIYTFNLLLHGLCNADKIDEASRL 599

Query: 668 FDRMRKF-VSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFC 841
           +   +K    PNVY+Y ++ID  CK  +VE+   L +E+ S     N V YNSLI  +C
Sbjct: 600 WHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYC 658



 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
 Frame = +2

Query: 500  FDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMVFDRM 679
            +  L+H  C    +DD   ++   +  +GL P++     ++   +K   +    +V   M
Sbjct: 685  YSSLMHGLCNIGLVDDAKHLL-DEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEM 743

Query: 680  RKF-VSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCKK 847
                + PN ++YT++ID  CK  + ++A  L +EM   G LP+ VTYN+  +G CK+
Sbjct: 744  SSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKE 800


>ref|XP_003548529.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Glycine max]
          Length = 840

 Score =  140 bits (353), Expect = 6e-31
 Identities = 88/239 (36%), Positives = 124/239 (51%), Gaps = 11/239 (4%)
 Frame = +2

Query: 161 DSSLCQETLSRLCPRRLERILLDLGSSLIRPKPALRFFSFASDSCAFRFTPRSYAILLHS 340
           DSS C+  L  L P   +R+ L L  + + PK    FF FA+  C FRFT RSY +LL S
Sbjct: 73  DSSKCKSILPHLTPHHFDRLFLSLHRT-VNPKTTHEFFRFATRHCNFRFTVRSYCLLLRS 131

Query: 341 LLRSNLTDASXXXXXXXXDPR------STVALFLDDPDQRFREIVLAVVDTAPSRDSPAF 502
           LL  +    +        D         T   F D    R REI  ++++     D    
Sbjct: 132 LLADSFVPRARFLLARLIDGHVPTWSSKTTTSFHD----RLREIASSMLELNQGSDEQRL 187

Query: 503 ---DLLVHLCCTQLRLDDGGIV--VFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMV 667
              DLL+H+ C+Q +         +F + + +G+ P LKTCN L+SSL K+  L  +  V
Sbjct: 188 GELDLLLHILCSQFKCLGSRCAFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEV 247

Query: 668 FDRMRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
           FD   + V+P+V+++T  I+A CK  RV  A+ LF +ME  G  PNVVTYN++IDG  K
Sbjct: 248 FDLACQGVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFK 306



 Score = 70.5 bits (171), Expect = 7e-10
 Identities = 48/131 (36%), Positives = 70/131 (53%), Gaps = 1/131 (0%)
 Frame = +2

Query: 458 LAVVDTAPSRDSPAFDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTK 637
           LA    AP  D   F   ++  C   R+ D  + +F  + G G+ P++ T N ++  L K
Sbjct: 250 LACQGVAP--DVFTFTTAINAFCKGGRVGDA-VDLFCKMEGLGVFPNVVTYNNVIDGLFK 306

Query: 638 SKNLEDAQMVFDRM-RKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVT 814
           S   E+A    DRM R  V+P+V +Y +LI  L K    E+A  +  EM S G  PN V 
Sbjct: 307 SGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVV 366

Query: 815 YNSLIDGFCKK 847
           +N+LIDG+C+K
Sbjct: 367 FNALIDGYCRK 377



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
 Frame = +2

Query: 593 PSLKTCNFLMSSLTKSKNLEDAQMVFDRMRKF-VSPNVYSYTMLIDALCKRRRVEQAMAL 769
           PS+ T   L+S L K +  E+A  V   M     +PN   +  LID  C++  + +A+ +
Sbjct: 327 PSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRV 386

Query: 770 FSEMESSGTLPNVVTYNSLIDGFCKKN 850
             EM   G  PN VT+N+L+ GFC+ N
Sbjct: 387 RDEMAMKGMKPNFVTFNTLLQGFCRSN 413



 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
 Frame = +2

Query: 500  FDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDA-QMVFDR 676
            +  L+H  C   R+D+    +F  +  +GL P++     L+    K   ++    ++ + 
Sbjct: 683  YSSLIHGMCCIGRVDEAK-EIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEM 741

Query: 677  MRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCKK 847
                + PN  +YT++ID  CK   +++A  L +EM  +G  P+ VTYN+L  G+CK+
Sbjct: 742  SSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKGYCKE 798



 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 32/133 (24%), Positives = 65/133 (48%), Gaps = 1/133 (0%)
 Frame = +2

Query: 449 EIVLAVVDTAPSRDSPAFDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSS 628
           E++  +++     D  +++ L+  CC   ++++   +   ++  Q   P   T NFLM  
Sbjct: 526 EVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQ-QEFQPDTYTYNFLMKG 584

Query: 629 LTKSKNLEDAQMVFDRMRKF-VSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPN 805
           L     ++D   +    +++   PNVY+Y +L++  CK  R+E A+  F  ++      +
Sbjct: 585 LADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELS 644

Query: 806 VVTYNSLIDGFCK 844
            V YN LI  +C+
Sbjct: 645 SVVYNILIAAYCR 657


>ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355523015|gb|AET03469.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  139 bits (349), Expect = 2e-30
 Identities = 90/231 (38%), Positives = 122/231 (52%), Gaps = 3/231 (1%)
 Frame = +2

Query: 161 DSSLCQETLSRLCPRRLERILLDLGSSLIRPKPALRFFSFASDSCAFRFTPRSYAILLHS 340
           DSS C+  +  L P   E       ++ +  K  L FFSFAS +  FRFT RSY IL+  
Sbjct: 62  DSSKCKTLIPNLTPHEFEHSFFTHHTT-VNLKTTLDFFSFASKNFKFRFTVRSYCILIRL 120

Query: 341 LLRSNLTDASXXXXXXXXDPRSTVALFLDDPDQRFREIVLAVVDTAPSRDSPAFDLLVHL 520
           LL SN    +        +  +   L     D R  EI  A ++    R     DLL+++
Sbjct: 121 LLASNHIPRAKFTLKRLIEGNANTPL--KKTDARLSEIASAFLELG-ERSHGELDLLIYI 177

Query: 521 CCTQLRL--DDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMVFDRM-RKFV 691
            C+Q +          F + T +G+ PSLK+CNFLMSSL KS  L  +  VFD M R  V
Sbjct: 178 LCSQFQHLGFHWAFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGV 237

Query: 692 SPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
             +VY+Y   I+A CK  ++++A+ LF +M   G LPNVVTYN+LIDG CK
Sbjct: 238 LIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCK 288



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
 Frame = +2

Query: 500  FDLLVH-LCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMVFDR 676
            +  ++H +CC  L  +  GI  F  +  +GL P++     L+    K   ++  + +   
Sbjct: 665  YSSIIHGMCCNDLVEEAKGI--FEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQE 722

Query: 677  MRK-FVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCKKN 850
            M    + PN  +YT++ID  CK    ++A  L +EM ++G  P+ VTY  L  G+CK+N
Sbjct: 723  MTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKEN 781



 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 34/116 (29%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
 Frame = +2

Query: 500 FDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMVFDRM 679
           + L++   C   R+D+  + +F  +    +  S    N L+++ +K+ N  +A  + D M
Sbjct: 595 YALMLEGYCNADRIDNA-VSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAM 653

Query: 680 RKF-VSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
           R   + P +++Y+ +I  +C    VE+A  +F EM + G +PNV  Y +LI G+CK
Sbjct: 654 RSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCK 709



 Score = 60.5 bits (145), Expect = 8e-07
 Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
 Frame = +2

Query: 500 FDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMVFDRM 679
           ++ L+   C   RL++  ++  G +    + PSL T   L++ L K +  ++A  V   M
Sbjct: 279 YNNLIDGLCKSGRLEEA-LMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEM 337

Query: 680 -RKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCKKN 850
             K  SPN + +  LID   ++  ++ A+ +  +M   G  PN VT+N+L+ GFC+ N
Sbjct: 338 YSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTN 395


>gb|AHB18408.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
          Length = 846

 Score =  138 bits (347), Expect = 3e-30
 Identities = 92/238 (38%), Positives = 127/238 (53%), Gaps = 4/238 (1%)
 Frame = +2

Query: 143 ISPAPFDSSLCQETLSRLCPRRLERILLDLGSSLIRPKPALRFFSFASDSCAFRFTPRSY 322
           +S    DSS  ++ L  L P   +R  + L S    PK  L FF  AS    FRFT RSY
Sbjct: 87  LSKPSLDSSKSKQLLPLLSPSDFDRFFIAL-SPRADPKTTLNFFHLASRCFNFRFTLRSY 145

Query: 323 AILLHSLLRSNLTDASXXXXXXXXDPRSTVALFLDDPDQRFREIVLAVVDTAPSRDSPA- 499
            IL+  LL SN + A+        D +  +    + P     +I +A+ D   S    A 
Sbjct: 146 YILILLLLLSNNSSAARLLLIRLIDGKLPLFSPNNPPTVNHIQIAIALADLNTSFKGVAG 205

Query: 500 FDLLVHLCCTQLRLDDG---GIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMVF 670
            DLL+HL CTQ + + G    I VF  +  +G+ PS KTCNF ++SL K+  +     VF
Sbjct: 206 VDLLLHLYCTQFK-NVGFTYAIDVFFTLAYKGIFPSTKTCNFFLNSLLKANEVRKTYQVF 264

Query: 671 DRMRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
           + + + VS +VY  T +I+  CK  R++ AMALFS ME+ G  PNVVTYN++I G CK
Sbjct: 265 ETLSRSVSLDVYLCTTMINGFCKGGRIQDAMALFSRMENLGISPNVVTYNNIIHGLCK 322



 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
 Frame = +2

Query: 500 FDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMVFDRM 679
           ++ ++H  C   RLD+    +   +T QG+  SL T + L++ L K    E+A  V   M
Sbjct: 313 YNNIIHGLCKSGRLDEA-FQIKQNMTKQGVDHSLITYSVLINGLIKLDKFEEANSVLKEM 371

Query: 680 R-KFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
             K  +PN + Y  LI   CK   +++A+ +  +M S+G  PN VT+N L+ GFC+
Sbjct: 372 SDKGFAPNEFVYNTLIAGYCKMENIDEALRIKHQMLSNGMKPNSVTFNLLMHGFCR 427



 Score = 60.5 bits (145), Expect = 8e-07
 Identities = 34/121 (28%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
 Frame = +2

Query: 488 DSPAFDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMV 667
           D  +++ L+  CC + ++++   +   +   +G+ P + T N L+  ++    +EDA  V
Sbjct: 554 DRVSYNTLILGCCKEGKVEEAFRLKEEMFK-RGIQPDIYTYNLLILGISNMGKMEDAVKV 612

Query: 668 FDRMRKF-VSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
           +D  +   +  NVY+Y +LID  C   ++E+   L  E+ ++    N V YN+LI  +CK
Sbjct: 613 WDESKSHGLISNVYTYAILIDGYCNVDQIEEGQNLLDEVVTTKLELNAVIYNTLIRAYCK 672

Query: 845 K 847
           K
Sbjct: 673 K 673



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
 Frame = +2

Query: 500  FDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMVFDRM 679
            +  L+H  C  + L D    +   + G GL P++     L+   +K   ++    +   M
Sbjct: 698  YSSLIHGMCN-IGLPDDAKRLLVEMRGLGLLPNVVCYAALIGGYSKLGQMDTVASLIQEM 756

Query: 680  RKF-VSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCKK 847
              + + PN  +YT++I+  CK  ++ +A  L +EM   G  P+ VTYN+ ++G CK+
Sbjct: 757  SSYDIQPNKVTYTIMINGYCKLAKMNEAAKLLTEMIKRGIAPDAVTYNAFMNGICKE 813


>ref|XP_004509525.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X1 [Cicer arietinum]
           gi|502153968|ref|XP_004509526.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X2 [Cicer arietinum]
           gi|502153970|ref|XP_004509527.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X3 [Cicer arietinum]
           gi|502153972|ref|XP_004509528.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X4 [Cicer arietinum]
           gi|502153974|ref|XP_004509529.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X5 [Cicer arietinum]
           gi|502153976|ref|XP_004509530.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X6 [Cicer arietinum]
           gi|502153978|ref|XP_004509531.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X7 [Cicer arietinum]
           gi|502153980|ref|XP_004509532.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X8 [Cicer arietinum]
           gi|502153982|ref|XP_004509533.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X9 [Cicer arietinum]
           gi|502153984|ref|XP_004509534.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X10 [Cicer arietinum]
          Length = 835

 Score =  138 bits (347), Expect = 3e-30
 Identities = 88/233 (37%), Positives = 126/233 (54%), Gaps = 5/233 (2%)
 Frame = +2

Query: 161 DSSLCQETLSRLCPRRLERILLDLGSSLIRPKPALRFFSFASDSCAFRFTPRSYAILLHS 340
           DSS C+  L  L P + + +     S+ +  K  L FF FAS+   F FT RSY +L+  
Sbjct: 70  DSSKCKSILPHLTPHQFDTLFFTHHST-VNLKTTLDFFRFASNQFKFCFTVRSYCLLIRL 128

Query: 341 LLRSNLTDASXXXXXXXXDPRSTVALFLDDPDQRFREIVLAVVDTA--PSRDSPAFDLLV 514
           LL SN    +        D   +  L   + D R  E+  + ++ +    R     DLL+
Sbjct: 129 LLCSNHLPRARFFMKRLIDGNVSTPLL--NRDDRLSEMASSFLELSRLTERSHGELDLLL 186

Query: 515 HLCCTQLRL--DDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMVFDRM-RK 685
           H+ C+Q +         +F + T  G+ PSLKTCNFL+SSL KS  L  +  VFD + R 
Sbjct: 187 HILCSQFQHLGFHWAFDIFTLFTSNGVFPSLKTCNFLLSSLVKSNELHKSYRVFDVVCRG 246

Query: 686 FVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
            VS +VY+++  I+A  K  +++ A+ LFS+ME  G LPNVVTYN+LIDG CK
Sbjct: 247 GVSLDVYTFSTAINAFSKGGKIDDAVGLFSKMEEQGVLPNVVTYNNLIDGLCK 299



 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
 Frame = +2

Query: 593 PSLKTCNFLMSSLTKSKNLEDAQMVFDRM-RKFVSPNVYSYTMLIDALCKRRRVEQAMAL 769
           PSL T    ++ L K++  ++A  V   M  K  SPN   +  LID  C++  +  A+ +
Sbjct: 320 PSLVTYGIFINGLMKNEKFDEANSVLVEMYSKGFSPNEIVFNALIDGYCRKGNMNVALRI 379

Query: 770 FSEMESSGTLPNVVTYNSLIDGFCKKN 850
             +M S G  PN VT+N+L+ GFC+ N
Sbjct: 380 RDDMMSKGMKPNAVTFNTLLQGFCRSN 406



 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 28/88 (31%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
 Frame = +2

Query: 584 GLCPSLKTCNFLMSSLTKSKNLEDAQMVFDRMR-KFVSPNVYSYTMLIDALCKRRRVEQA 760
           G+ P+++T + L+  + +   +E+A+ +F+ +R + + PNV+ YT LI   CK  +++  
Sbjct: 669 GILPTIQTYSSLIHGMCRIGRVEEAKEIFEEIRNEALLPNVFCYTALIGGYCKLGQMDAV 728

Query: 761 MALFSEMESSGTLPNVVTYNSLIDGFCK 844
            ++  EM S    PN +TY  +I G+CK
Sbjct: 729 PSILLEMTSKSIQPNKITYTIMIHGYCK 756



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 1/116 (0%)
 Frame = +2

Query: 500 FDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMVFDRM 679
           + L++   C   R+D+  + +F  +  + +  S    N L+++ +K+ N  +A  + D M
Sbjct: 607 YALMLEGYCKADRIDNA-VSLFNNLVNKEVELSSVVYNILIAAHSKAGNFMEAFKLRDAM 665

Query: 680 RKF-VSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
           +   + P + +Y+ LI  +C+  RVE+A  +F E+ +   LPNV  Y +LI G+CK
Sbjct: 666 KSSGILPTIQTYSSLIHGMCRIGRVEEAKEIFEEIRNEALLPNVFCYTALIGGYCK 721


>ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  134 bits (336), Expect = 5e-29
 Identities = 88/240 (36%), Positives = 124/240 (51%), Gaps = 6/240 (2%)
 Frame = +2

Query: 143 ISPAPFDSSLCQETLSRLCPRRLERILLDLGSSLIRPKPALRFFSFASDSCAFRFTPRSY 322
           +S +  DSS C   L  L P + +++   +G     P   L FF FAS+S  FRFT  SY
Sbjct: 54  LSHSSLDSSKCSALLPHLSPSQFDQLFFSIGLKA-NPMTCLNFFYFASNSFKFRFTIHSY 112

Query: 323 AILLHSLLRSNLTDASXXXXXXXXDPRSTVALFLDDPDQRFREIVLAVVDTAPSRD---- 490
             L+  L+RS     +        D    V     D ++   EI  A+            
Sbjct: 113 CTLILLLIRSKFIPPARLLLIRLIDGNLPVLNL--DSEKFHIEIANALFGLTSVVGRFEW 170

Query: 491 SPAFDLLVHLCCTQLRL--DDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQM 664
           + AFDLL+H+  TQ R       + VF ++  +G  PSLKTCNFL+SSL K+   E    
Sbjct: 171 TQAFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCE 230

Query: 665 VFDRMRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
           VF  M +   P+V+S+T +I+ALCK  ++E A+ LF +ME  G  PNVVTYN +I+G C+
Sbjct: 231 VFRVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQ 290



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 37/118 (31%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
 Frame = +2

Query: 500  FDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMVFDRM 679
            +  L+H  C    ++D   ++   +  +G  P++     L+    K   ++ A+  +  M
Sbjct: 666  YSSLIHGVCNIGLVEDAKHLI-DEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEM 724

Query: 680  RKF-VSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCKKN 850
              F + PN ++YT++ID  CK   +E+A  L  +M+ SG +P+VVTYN L +GFCK N
Sbjct: 725  ISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKAN 782



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
 Frame = +2

Query: 488 DSPAFDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMV 667
           D   ++ L+   C   +LDD  I ++      GL  ++ T   +M    K+  +ED + +
Sbjct: 557 DIYTYNFLLRGLCNVGKLDDA-IKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENL 615

Query: 668 FDRM-RKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFC 841
           F+ +  K +  N   Y ++I A C+   V  A+ L   M+S G LPN  TY+SLI G C
Sbjct: 616 FNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVC 674


>ref|XP_006282558.1| hypothetical protein CARUB_v10004123mg [Capsella rubella]
           gi|482551263|gb|EOA15456.1| hypothetical protein
           CARUB_v10004123mg [Capsella rubella]
          Length = 838

 Score =  133 bits (334), Expect = 9e-29
 Identities = 86/242 (35%), Positives = 130/242 (53%), Gaps = 11/242 (4%)
 Frame = +2

Query: 143 ISPAPFDSSLCQETLSRLCPRRLERILLDLGSSLIRPKPALRFFSFASDSCAFRFTPRSY 322
           +S    D  LC++ ++ L P   +R+  +  S  + PK AL FF  ASDS +F F+ RSY
Sbjct: 81  LSKRSLDYELCKQLITVLSPLEFDRLFPEFRSK-VNPKTALNFFRLASDSFSFSFSLRSY 139

Query: 323 AILLHSLLRSNLTDASXXXXXXXXDPRSTVALFLDDPDQRFREIVLAVVDTAPSRDSPAF 502
            +L+  LL +NL   +        +    V   L   D   R+  +A+ D A +R S  F
Sbjct: 140 CLLIGLLLDANLLSPARVTLIRLINGNVPV---LPCGDGGLRDSRVAIAD-AMARLSLCF 195

Query: 503 D---------LLVHLCCTQLRLDDGGIV--VFGIITGQGLCPSLKTCNFLMSSLTKSKNL 649
           D         LL+ + CTQ + D   +   VF  +  +G+ PS  TCN L++SL ++   
Sbjct: 196 DEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPFLANKGMFPSKTTCNILLTSLVRANEF 255

Query: 650 EDAQMVFDRMRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLI 829
           +     F+ + K V P+VY +T  I+A CK  +VE+A+ LFS+ME +G  PNVVTYN++I
Sbjct: 256 QKCCEAFEVVCKGVFPDVYLFTTAINAFCKGGKVEEALVLFSKMEEAGVAPNVVTYNTVI 315

Query: 830 DG 835
           DG
Sbjct: 316 DG 317



 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
 Frame = +2

Query: 488 DSPAFDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDA-QM 664
           D  +++ L+  CC + +LD+  +++  ++  +GL P   T   L   L     +E+A Q 
Sbjct: 552 DRVSYNTLISGCCKKSKLDEAFMLMDEMVK-RGLEPDNYTYCILFRGLFNMNKVEEAIQF 610

Query: 665 VFDRMRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
             D  R  + P+VY+Y+++ID  CK  R E+   LF EM S+   PN V YN LI  +C+
Sbjct: 611 WGDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNKVQPNTVVYNHLIGAYCR 670



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
 Frame = +2

Query: 500 FDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMVFDRM 679
           F   ++  C   ++++  +V+F  +   G+ P++ T N ++  L  S   ++A M  ++M
Sbjct: 276 FTTAINAFCKGGKVEEA-LVLFSKMEEAGVAPNVVTYNTVIDGLGMSGRYDEALMFKEKM 334

Query: 680 -RKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLID 832
             + V P + +Y++L+  L K +R+  A  +  EM   G  PNV+ YN+LID
Sbjct: 335 VERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLID 386


>sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  129 bits (325), Expect = 1e-27
 Identities = 82/241 (34%), Positives = 126/241 (52%), Gaps = 10/241 (4%)
 Frame = +2

Query: 143 ISPAPFDSSLCQETLSRLCPRRLERILLDLGSSLIRPKPALRFFSFASDSCAFRFTPRSY 322
           +S    D   C++ ++ L P   +R+  +  S  + PK AL FF  ASDS +F F+ RSY
Sbjct: 84  LSKRSLDYEQCKQLITVLSPLEFDRLFPEFRSK-VNPKTALDFFRLASDSFSFSFSLRSY 142

Query: 323 AILLHSLLRSNLTDASXXXXXXXXDPRSTVALFLDDPDQRFREIVLAVVDTAPSRD---- 490
            +L+  LL +NL  A+        +    V           R+  +A+ D   S      
Sbjct: 143 CLLIGLLLDANLLSAARVVLIRLINGNVPVL------PCGLRDSRVAIADAMASLSLCFD 196

Query: 491 ----SPAFDLLVHLCCTQLRLDDG--GIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLE 652
                   DLL+ + CTQ + D     + VF ++  +G+ PS  TCN L++SL ++   +
Sbjct: 197 EEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQ 256

Query: 653 DAQMVFDRMRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLID 832
                FD + K VSP+VY +T  I+A CK  +VE+A+ LFS+ME +G  PNVVT+N++ID
Sbjct: 257 KCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVID 316

Query: 833 G 835
           G
Sbjct: 317 G 317



 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
 Frame = +2

Query: 434 DQRFREIVLAVVDTAPSRDSPAFDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCN 613
           D+ FR I   ++      D  +++ L+  CC + +LD+  + +  ++  +GL P   T +
Sbjct: 535 DEAFR-IQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK-RGLKPDNYTYS 592

Query: 614 FLMSSLTKSKNLEDA-QMVFDRMRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESS 790
            L+  L     +E+A Q   D  R  + P+VY+Y+++ID  CK  R E+    F EM S 
Sbjct: 593 ILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 652

Query: 791 GTLPNVVTYNSLIDGFCK 844
              PN V YN LI  +C+
Sbjct: 653 NVQPNTVVYNHLIRAYCR 670



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
 Frame = +2

Query: 488 DSPAFDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDA-QM 664
           D   + +++  CC   R ++G    F  +  + + P+    N L+ +  +S  L  A ++
Sbjct: 622 DVYTYSVMIDGCCKAERTEEGQ-EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 680

Query: 665 VFDRMRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
             D   K +SPN  +YT LI  +    RVE+A  LF EM   G  PNV  Y +LIDG+ K
Sbjct: 681 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 740


>emb|CAA18631.1| putative protein [Arabidopsis thaliana] gi|7268739|emb|CAB78946.1|
           putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  129 bits (325), Expect = 1e-27
 Identities = 82/241 (34%), Positives = 126/241 (52%), Gaps = 10/241 (4%)
 Frame = +2

Query: 143 ISPAPFDSSLCQETLSRLCPRRLERILLDLGSSLIRPKPALRFFSFASDSCAFRFTPRSY 322
           +S    D   C++ ++ L P   +R+  +  S  + PK AL FF  ASDS +F F+ RSY
Sbjct: 60  LSKRSLDYEQCKQLITVLSPLEFDRLFPEFRSK-VNPKTALDFFRLASDSFSFSFSLRSY 118

Query: 323 AILLHSLLRSNLTDASXXXXXXXXDPRSTVALFLDDPDQRFREIVLAVVDTAPSRD---- 490
            +L+  LL +NL  A+        +    V           R+  +A+ D   S      
Sbjct: 119 CLLIGLLLDANLLSAARVVLIRLINGNVPVL------PCGLRDSRVAIADAMASLSLCFD 172

Query: 491 ----SPAFDLLVHLCCTQLRLDDG--GIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLE 652
                   DLL+ + CTQ + D     + VF ++  +G+ PS  TCN L++SL ++   +
Sbjct: 173 EEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQ 232

Query: 653 DAQMVFDRMRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLID 832
                FD + K VSP+VY +T  I+A CK  +VE+A+ LFS+ME +G  PNVVT+N++ID
Sbjct: 233 KCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVID 292

Query: 833 G 835
           G
Sbjct: 293 G 293



 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
 Frame = +2

Query: 434 DQRFREIVLAVVDTAPSRDSPAFDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCN 613
           D+ FR I   ++      D  +++ L+  CC + +LD+  + +  ++  +GL P   T +
Sbjct: 511 DEAFR-IQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK-RGLKPDNYTYS 568

Query: 614 FLMSSLTKSKNLEDA-QMVFDRMRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESS 790
            L+  L     +E+A Q   D  R  + P+VY+Y+++ID  CK  R E+    F EM S 
Sbjct: 569 ILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 628

Query: 791 GTLPNVVTYNSLIDGFCK 844
              PN V YN LI  +C+
Sbjct: 629 NVQPNTVVYNHLIRAYCR 646



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
 Frame = +2

Query: 488 DSPAFDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDA-QM 664
           D   + +++  CC   R ++G    F  +  + + P+    N L+ +  +S  L  A ++
Sbjct: 598 DVYTYSVMIDGCCKAERTEEGQ-EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 656

Query: 665 VFDRMRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
             D   K +SPN  +YT LI  +    RVE+A  LF EM   G  PNV  Y +LIDG+ K
Sbjct: 657 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 716


>ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|334186696|ref|NP_001190771.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis
           thaliana] gi|332658782|gb|AEE84182.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|332658783|gb|AEE84183.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  129 bits (325), Expect = 1e-27
 Identities = 82/241 (34%), Positives = 126/241 (52%), Gaps = 10/241 (4%)
 Frame = +2

Query: 143 ISPAPFDSSLCQETLSRLCPRRLERILLDLGSSLIRPKPALRFFSFASDSCAFRFTPRSY 322
           +S    D   C++ ++ L P   +R+  +  S  + PK AL FF  ASDS +F F+ RSY
Sbjct: 71  LSKRSLDYEQCKQLITVLSPLEFDRLFPEFRSK-VNPKTALDFFRLASDSFSFSFSLRSY 129

Query: 323 AILLHSLLRSNLTDASXXXXXXXXDPRSTVALFLDDPDQRFREIVLAVVDTAPSRD---- 490
            +L+  LL +NL  A+        +    V           R+  +A+ D   S      
Sbjct: 130 CLLIGLLLDANLLSAARVVLIRLINGNVPVL------PCGLRDSRVAIADAMASLSLCFD 183

Query: 491 ----SPAFDLLVHLCCTQLRLDDG--GIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLE 652
                   DLL+ + CTQ + D     + VF ++  +G+ PS  TCN L++SL ++   +
Sbjct: 184 EEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQ 243

Query: 653 DAQMVFDRMRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLID 832
                FD + K VSP+VY +T  I+A CK  +VE+A+ LFS+ME +G  PNVVT+N++ID
Sbjct: 244 KCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVID 303

Query: 833 G 835
           G
Sbjct: 304 G 304



 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
 Frame = +2

Query: 434 DQRFREIVLAVVDTAPSRDSPAFDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCN 613
           D+ FR I   ++      D  +++ L+  CC + +LD+  + +  ++  +GL P   T +
Sbjct: 522 DEAFR-IQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK-RGLKPDNYTYS 579

Query: 614 FLMSSLTKSKNLEDA-QMVFDRMRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESS 790
            L+  L     +E+A Q   D  R  + P+VY+Y+++ID  CK  R E+    F EM S 
Sbjct: 580 ILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 639

Query: 791 GTLPNVVTYNSLIDGFCK 844
              PN V YN LI  +C+
Sbjct: 640 NVQPNTVVYNHLIRAYCR 657



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
 Frame = +2

Query: 488 DSPAFDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDA-QM 664
           D   + +++  CC   R ++G    F  +  + + P+    N L+ +  +S  L  A ++
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQ-EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667

Query: 665 VFDRMRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
             D   K +SPN  +YT LI  +    RVE+A  LF EM   G  PNV  Y +LIDG+ K
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 727


>ref|XP_006413978.1| hypothetical protein EUTSA_v10024401mg [Eutrema salsugineum]
           gi|557115148|gb|ESQ55431.1| hypothetical protein
           EUTSA_v10024401mg [Eutrema salsugineum]
          Length = 837

 Score =  129 bits (323), Expect = 2e-27
 Identities = 80/237 (33%), Positives = 125/237 (52%), Gaps = 6/237 (2%)
 Frame = +2

Query: 143 ISPAPFDSSLCQETLSRLCPRRLERILLDLGSSLIRPKPALRFFSFASDSCAFRFTPRSY 322
           +S    D   C++ ++ L P   +R+  D  S  + PK AL FF  ASDS +F F+ RSY
Sbjct: 81  LSRRSLDYEQCKQLIATLSPHEFDRLFPDFRSK-VNPKTALDFFRLASDSFSFSFSLRSY 139

Query: 323 AILLHSLLRSNLTDASXXXXXXXXDPRSTVALFLDDPDQRFREIVLAVVDTA----PSRD 490
            +L+  LL ++L   +        +    V    +D       I  A+   +    P   
Sbjct: 140 CLLIGLLLDASLLSPARLVLIRLINGNVPVLPSANDSRDGRVAIADAMASLSLCFDPEIR 199

Query: 491 SPAFDLLVHLCCTQLRLDDGGIV--VFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQM 664
               DLL+ + CTQ +     +   +F ++  +GL PS  TCN L++SL ++   +    
Sbjct: 200 MRISDLLIEVYCTQFKRAGCYLALDIFPLLANKGLFPSRTTCNILLTSLVRANEFQKCCE 259

Query: 665 VFDRMRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDG 835
            F+ + K VSP+VY +T +I+A CKR +V +A+ LFS+ME +G  PNVVTYN++IDG
Sbjct: 260 AFEAVCKGVSPDVYLFTTVINAYCKRGKVGEAIELFSKMEEAGVAPNVVTYNTVIDG 316



 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
 Frame = +2

Query: 488 DSPAFDLLVHLCCTQLRLDDGGIVVFGII---TGQGLCPSLKTCNFLMSSLTKSKNLEDA 658
           D+ +++ L+  C  + +L++     FG +     +GL P   T + L+  L     +E+A
Sbjct: 551 DNVSYNTLISGCFRKRKLEEA----FGFMDEMVKRGLKPDNYTYSILIRGLFNMNKVEEA 606

Query: 659 QMVF-DRMRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDG 835
              + D  +  + P+V +Y+++ID  CK  R E+   LF EM  +   PNVV YN LI  
Sbjct: 607 IRFWGDCKQNGMLPDVCTYSVMIDGCCKAERAEEGQKLFDEMIRNNVQPNVVVYNHLIGA 666

Query: 836 FCK 844
           +C+
Sbjct: 667 YCR 669



 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
 Frame = +2

Query: 482 SRDSPAFDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQ 661
           S D   F  +++  C + ++ +  I +F  +   G+ P++ T N ++  L  S   ++A 
Sbjct: 269 SPDVYLFTTVINAYCKRGKVGEA-IELFSKMEEAGVAPNVVTYNTVIDGLGMSGRYDEAF 327

Query: 662 MVFDRM-RKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDG 835
           M  ++M  + V P + +Y++L+  L K +R+  A  +  EM   G  PNV+ YN+LIDG
Sbjct: 328 MFKEKMVERGVEPTLITYSILVKGLIKAKRIGDAYYVVKEMTEKGFPPNVIVYNNLIDG 386


>ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata] gi|297313772|gb|EFH44195.1| hypothetical protein
           ARALYDRAFT_492917 [Arabidopsis lyrata subsp. lyrata]
          Length = 817

 Score =  128 bits (321), Expect = 3e-27
 Identities = 81/241 (33%), Positives = 127/241 (52%), Gaps = 10/241 (4%)
 Frame = +2

Query: 143 ISPAPFDSSLCQETLSRLCPRRLERILLDLGSSLIRPKPALRFFSFASDSCAFRFTPRSY 322
           +S    D   C++ ++ L P   +R+  +     + PK AL FF  ASDS +F F+ RSY
Sbjct: 60  LSKRSLDYEQCKQLITVLSPHEFDRLFPEFRFK-VNPKTALDFFRLASDSFSFSFSLRSY 118

Query: 323 AILLHSLLRSNLTDASXXXXXXXXDPRSTVALFLDDPDQRFREIVLAVVDTAPSRD---- 490
            +L+  LL +NL+  +        +    V   L   +   R+  +A+ D   S      
Sbjct: 119 CLLIGLLLDANLSSPARVVLIRLINGNVPV---LPCGNGGLRDSRVAIADAMASLSLCFD 175

Query: 491 ----SPAFDLLVHLCCTQLRLDDGGIV--VFGIITGQGLCPSLKTCNFLMSSLTKSKNLE 652
                   DLL+ + CTQ + D   +   VF ++  +G+ PS  TCN L++SL ++   +
Sbjct: 176 EEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQ 235

Query: 653 DAQMVFDRMRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLID 832
                F  + K VSP+VY +T  I+A CK  +VE+A+ LFS+ME +G +PNVVTYN++ID
Sbjct: 236 KCCEAFHVVCKGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVID 295

Query: 833 G 835
           G
Sbjct: 296 G 296



 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
 Frame = +2

Query: 488 DSPAFDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDA-QM 664
           D  +++ L+  CC   +LD+  + +  ++  +GL P   T + L+  L     +E+A Q 
Sbjct: 531 DRVSYNTLISGCCGNKKLDEAFMFMDEMVK-KGLKPDNYTYSILIRGLLNMNKVEEAIQF 589

Query: 665 VFDRMRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
             D  R  + P+VY+Y+++ID  CK  R E+   LF EM S+   PN V YN LI  +C+
Sbjct: 590 WGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCR 649



 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
 Frame = +2

Query: 488 DSPAFDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDA-QM 664
           D   + +++  CC   R ++G   +F  +    L P+    N L+ +  +S  L  A ++
Sbjct: 601 DVYTYSVMIDGCCKAERTEEGQ-KLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALEL 659

Query: 665 VFDRMRKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
             D   K +SPN  +YT LI  +    RVE+A  L  EM   G  PNV  Y +LIDG+ K
Sbjct: 660 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGK 719



 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
 Frame = +2

Query: 464 VVDTAPSRDSPAFDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSK 643
           VV    S D   F   ++  C   ++++  I +F  +   G+ P++ T N ++  L  S 
Sbjct: 243 VVCKGVSPDVYLFTTAINAFCKGGKVEEA-IELFSKMEEAGVVPNVVTYNTVIDGLGMSG 301

Query: 644 NLEDAQMVFDRM-RKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYN 820
             ++A M  ++M  + V P + +Y++L+  L K +R+  A  +  EM   G  PNV+ YN
Sbjct: 302 RYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYN 361

Query: 821 SLID 832
           +LID
Sbjct: 362 NLID 365


>gb|ESW28323.1| hypothetical protein PHAVU_003G277400g [Phaseolus vulgaris]
          Length = 837

 Score =  127 bits (319), Expect = 5e-27
 Identities = 84/233 (36%), Positives = 124/233 (53%), Gaps = 5/233 (2%)
 Frame = +2

Query: 161 DSSLCQETLSRLCPRRLERILLDLGSSLIRPKPALRFFSFASDSCAFRFTPRSYAILLHS 340
           DSS C+  L  L P   +R+   +  + + P   L FF  A++   F FT RSY +LL S
Sbjct: 75  DSSKCKSILPHLSPLEFDRLFFPIHHT-VNPITTLDFFRLATNRFKFPFTFRSYCLLLRS 133

Query: 341 LLRSNLTDASXXXXXXXXDPRSTVALFLDDPDQRFREIVLAVVDTAPSRDSP--AFDLLV 514
           LL S+L   +        D    V     D + R REI  ++++     D+     DLL+
Sbjct: 134 LLASSLLPRARSLVTRLIDGH--VPTSFHDRENRLREIASSMLELNQVLDTRHGELDLLL 191

Query: 515 HLCCTQLRLDDG---GIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMVFDRMRK 685
           ++ C++ + D G      +F + + +G+ P LKTCNFL+SSL  +  L  +  VFD   +
Sbjct: 192 YILCSRYK-DFGFRCAFDIFIMFSKRGVFPCLKTCNFLLSSLVTANELHKSYEVFDVTCQ 250

Query: 686 FVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCK 844
            V P+V+ +T  I+A CK  RV  A+ LF +ME  G  PNVVTYN++IDG  K
Sbjct: 251 GVVPDVFMFTAAINAFCKGGRVGDAVDLFHKMEKLGVSPNVVTYNNVIDGLSK 303



 Score = 73.6 bits (179), Expect = 9e-11
 Identities = 44/117 (37%), Positives = 67/117 (57%), Gaps = 1/117 (0%)
 Frame = +2

Query: 500 FDLLVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDAQMVFDRM 679
           F   ++  C   R+ D  + +F  +   G+ P++ T N ++  L+KS  LE+A    DRM
Sbjct: 259 FTAAINAFCKGGRVGDA-VDLFHKMEKLGVSPNVVTYNNVIDGLSKSGRLEEAFRFKDRM 317

Query: 680 -RKFVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCKK 847
            R  V+P+V +Y  LI+ L K  + E+A  +  EM S G  PN V +NSLIDG+C+K
Sbjct: 318 VRSEVNPSVVTYGALINGLMKMEKFEEANEMLEEMYSKGFAPNEVVFNSLIDGYCRK 374



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
 Frame = +2

Query: 593 PSLKTCNFLMSSLTKSKNLEDAQMVFDRM-RKFVSPNVYSYTMLIDALCKRRRVEQAMAL 769
           PS+ T   L++ L K +  E+A  + + M  K  +PN   +  LID  C++  + +A+  
Sbjct: 324 PSVVTYGALINGLMKMEKFEEANEMLEEMYSKGFAPNEVVFNSLIDGYCRKGNMIEALRT 383

Query: 770 FSEMESSGTLPNVVTYNSLIDGFCKKN 850
             EM   G  PN VT+N+L+ GFC+ N
Sbjct: 384 RDEMVLKGMKPNSVTFNTLLQGFCRSN 410



 Score = 57.4 bits (137), Expect = 7e-06
 Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
 Frame = +2

Query: 509  LVHLCCTQLRLDDGGIVVFGIITGQGLCPSLKTCNFLMSSLTKSKNLEDA-QMVFDRMRK 685
            L+H  C   R+D+    +F  +  +GL P +     L+    K   ++    ++ +    
Sbjct: 682  LIHGMCCIGRVDEAK-EIFEKMRNEGLLPDIFCYTALIGGYCKLGQMDKVGSILLEMSSN 740

Query: 686  FVSPNVYSYTMLIDALCKRRRVEQAMALFSEMESSGTLPNVVTYNSLIDGFCKK 847
             +  N  +YT++IDA CK   V++A  L ++M  +G  P+ +TYN+L  G+CK+
Sbjct: 741  SIQLNKITYTIMIDAYCKLGNVKEATELLNQMIRNGIAPDTITYNTLQKGYCKE 794