BLASTX nr result
ID: Zingiber25_contig00039984
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00039984
(334 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003563809.1| PREDICTED: uncharacterized protein LOC100835... 130 2e-28
ref|XP_004951333.1| PREDICTED: nucleolin 2-like [Setaria italica] 129 4e-28
dbj|BAJ92196.1| predicted protein [Hordeum vulgare subsp. vulgar... 129 4e-28
ref|XP_006657035.1| PREDICTED: nucleolin 2-like [Oryza brachyantha] 128 7e-28
gb|EEE65842.1| hypothetical protein OsJ_21610 [Oryza sativa Japo... 126 3e-27
gb|EEC80771.1| hypothetical protein OsI_23281 [Oryza sativa Indi... 126 3e-27
gb|EEC72816.1| hypothetical protein OsI_06525 [Oryza sativa Indi... 126 3e-27
ref|XP_006648497.1| PREDICTED: nucleolin 1-like [Oryza brachyantha] 125 4e-27
ref|NP_001046416.1| Os02g0244600 [Oryza sativa Japonica Group] g... 124 2e-26
gb|EAZ22392.1| hypothetical protein OsJ_06050 [Oryza sativa Japo... 124 2e-26
ref|XP_004488716.1| PREDICTED: polyadenylate-binding protein, cy... 123 2e-26
ref|NP_001042362.1| Os01g0209400 [Oryza sativa Japonica Group] g... 123 3e-26
ref|NP_001130716.1| hypothetical protein [Zea mays] gi|194689926... 123 3e-26
ref|XP_002277842.1| PREDICTED: polyadenylate-binding protein, cy... 123 3e-26
ref|XP_002437116.1| hypothetical protein SORBIDRAFT_10g021290 [S... 122 4e-26
gb|ACG35035.1| CID11 [Zea mays] 122 4e-26
ref|NP_001130545.1| uncharacterized protein LOC100191644 [Zea ma... 122 4e-26
gb|EOY13696.1| CTC-interacting domain 9 [Theobroma cacao] 122 5e-26
gb|EMT30952.1| Splicing factor, arginine/serine-rich 12 [Aegilop... 122 5e-26
ref|XP_002529948.1| RNA-binding protein, putative [Ricinus commu... 121 8e-26
>ref|XP_003563809.1| PREDICTED: uncharacterized protein LOC100835921 [Brachypodium
distachyon]
Length = 351
Score = 130 bits (326), Expect = 2e-28
Identities = 59/79 (74%), Positives = 71/79 (89%)
Frame = +2
Query: 98 QPNRRRRNGYDQGRWRMNDRSRRAEREDSIRRTVYVSAIDYHVTEEKLAKIFSNYGEVVD 277
QPNRRRRNG++QGR RM R RR +REDS+RRTVYVS ID HVTE+KLA++FSN G+VVD
Sbjct: 135 QPNRRRRNGFNQGRRRMGPRPRRTDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGQVVD 194
Query: 278 CRICGDPHSILRFAFIEFS 334
CRICGDP+S++RFAFIEF+
Sbjct: 195 CRICGDPNSVMRFAFIEFA 213
>ref|XP_004951333.1| PREDICTED: nucleolin 2-like [Setaria italica]
Length = 347
Score = 129 bits (324), Expect = 4e-28
Identities = 66/112 (58%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
Frame = +2
Query: 2 PVFVAASSFHGYGPXXXXXXXXXXXXXXXXXXQP-NRRRRNGYDQGRWRMNDRSRRAERE 178
PVFV+A+ + YG P NRRRRN ++QGR R+ R RRA+RE
Sbjct: 100 PVFVSAAEY--YGAAGGGSRDSSSDGSSNGSGNPLNRRRRNSFNQGRRRLGGRPRRADRE 157
Query: 179 DSIRRTVYVSAIDYHVTEEKLAKIFSNYGEVVDCRICGDPHSILRFAFIEFS 334
DS+RRTVYVS ID HVTE+KLA++FSN G+VVDCRICGDPHS+LRFAFIEF+
Sbjct: 158 DSVRRTVYVSDIDQHVTEQKLAEVFSNCGQVVDCRICGDPHSVLRFAFIEFA 209
>dbj|BAJ92196.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326532980|dbj|BAJ89335.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 351
Score = 129 bits (324), Expect = 4e-28
Identities = 59/79 (74%), Positives = 71/79 (89%)
Frame = +2
Query: 98 QPNRRRRNGYDQGRWRMNDRSRRAEREDSIRRTVYVSAIDYHVTEEKLAKIFSNYGEVVD 277
QPNRRRRNG++QGR RM R RR +REDS+RRTVYVS ID HVTE+KLA++FSN G+VVD
Sbjct: 135 QPNRRRRNGFNQGRRRMGVRPRRTDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGQVVD 194
Query: 278 CRICGDPHSILRFAFIEFS 334
CRICGDP+S++RFAFIEF+
Sbjct: 195 CRICGDPNSVMRFAFIEFA 213
>ref|XP_006657035.1| PREDICTED: nucleolin 2-like [Oryza brachyantha]
Length = 286
Score = 128 bits (322), Expect = 7e-28
Identities = 59/79 (74%), Positives = 70/79 (88%)
Frame = +2
Query: 98 QPNRRRRNGYDQGRWRMNDRSRRAEREDSIRRTVYVSAIDYHVTEEKLAKIFSNYGEVVD 277
QPNRRRRN ++QGR RM R RR +REDS+RRTVYVS ID HVTE+KLA++FSN G+VVD
Sbjct: 70 QPNRRRRNSFNQGRRRMGGRPRRTDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGQVVD 129
Query: 278 CRICGDPHSILRFAFIEFS 334
CRICGDP+S+LRFAFIEF+
Sbjct: 130 CRICGDPNSVLRFAFIEFA 148
>gb|EEE65842.1| hypothetical protein OsJ_21610 [Oryza sativa Japonica Group]
Length = 367
Score = 126 bits (317), Expect = 3e-27
Identities = 58/79 (73%), Positives = 70/79 (88%)
Frame = +2
Query: 98 QPNRRRRNGYDQGRWRMNDRSRRAEREDSIRRTVYVSAIDYHVTEEKLAKIFSNYGEVVD 277
QPNRRRR+ ++QGR RM R RR +REDS+RRTVYVS ID HVTE+KLA++FSN G+VVD
Sbjct: 146 QPNRRRRSSFNQGRRRMGGRPRRTDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGQVVD 205
Query: 278 CRICGDPHSILRFAFIEFS 334
CRICGDP+S+LRFAFIEF+
Sbjct: 206 CRICGDPNSVLRFAFIEFA 224
>gb|EEC80771.1| hypothetical protein OsI_23281 [Oryza sativa Indica Group]
Length = 372
Score = 126 bits (317), Expect = 3e-27
Identities = 58/79 (73%), Positives = 70/79 (88%)
Frame = +2
Query: 98 QPNRRRRNGYDQGRWRMNDRSRRAEREDSIRRTVYVSAIDYHVTEEKLAKIFSNYGEVVD 277
QPNRRRR+ ++QGR RM R RR +REDS+RRTVYVS ID HVTE+KLA++FSN G+VVD
Sbjct: 149 QPNRRRRSSFNQGRRRMGGRPRRTDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGQVVD 208
Query: 278 CRICGDPHSILRFAFIEFS 334
CRICGDP+S+LRFAFIEF+
Sbjct: 209 CRICGDPNSVLRFAFIEFA 227
>gb|EEC72816.1| hypothetical protein OsI_06525 [Oryza sativa Indica Group]
Length = 287
Score = 126 bits (316), Expect = 3e-27
Identities = 66/115 (57%), Positives = 81/115 (70%), Gaps = 4/115 (3%)
Frame = +2
Query: 2 PVFVAASSFH---GYGPXXXXXXXXXXXXXXXXXXQP-NRRRRNGYDQGRWRMNDRSRRA 169
PVFV+A+ + G G QP NRRRR+G++QGR R R+RRA
Sbjct: 35 PVFVSAAEYFVGSGAGAGGVGGRDSSSDGSSNGGGQPQNRRRRSGFNQGRRRTGGRTRRA 94
Query: 170 EREDSIRRTVYVSAIDYHVTEEKLAKIFSNYGEVVDCRICGDPHSILRFAFIEFS 334
+REDS+RRTVYVS ID VTE+KLA++FSN G+VVDCRICGDPHS+LRFAFIEF+
Sbjct: 95 DREDSVRRTVYVSDIDQQVTEQKLAEVFSNCGQVVDCRICGDPHSVLRFAFIEFA 149
>ref|XP_006648497.1| PREDICTED: nucleolin 1-like [Oryza brachyantha]
Length = 313
Score = 125 bits (315), Expect = 4e-27
Identities = 58/77 (75%), Positives = 69/77 (89%)
Frame = +2
Query: 104 NRRRRNGYDQGRWRMNDRSRRAEREDSIRRTVYVSAIDYHVTEEKLAKIFSNYGEVVDCR 283
NRRRRNG++QGR R R+RRA+REDS+RRTVYVS ID VTE+KLA++FSN G+VVDCR
Sbjct: 99 NRRRRNGFNQGRRRAGGRTRRADREDSVRRTVYVSDIDQQVTEQKLAEVFSNCGQVVDCR 158
Query: 284 ICGDPHSILRFAFIEFS 334
ICGDPHS+LRFAFIEF+
Sbjct: 159 ICGDPHSVLRFAFIEFA 175
>ref|NP_001046416.1| Os02g0244600 [Oryza sativa Japonica Group]
gi|50252270|dbj|BAD28276.1| putative RNA-binding protein
[Oryza sativa Japonica Group]
gi|113535947|dbj|BAF08330.1| Os02g0244600 [Oryza sativa
Japonica Group]
Length = 359
Score = 124 bits (310), Expect = 2e-26
Identities = 57/77 (74%), Positives = 69/77 (89%)
Frame = +2
Query: 104 NRRRRNGYDQGRWRMNDRSRRAEREDSIRRTVYVSAIDYHVTEEKLAKIFSNYGEVVDCR 283
NRRRR+G++QGR R R+RRA+REDS+RRTVYVS ID VTE+KLA++FSN G+VVDCR
Sbjct: 145 NRRRRSGFNQGRRRTGGRTRRADREDSVRRTVYVSDIDQQVTEQKLAEVFSNCGQVVDCR 204
Query: 284 ICGDPHSILRFAFIEFS 334
ICGDPHS+LRFAFIEF+
Sbjct: 205 ICGDPHSVLRFAFIEFA 221
>gb|EAZ22392.1| hypothetical protein OsJ_06050 [Oryza sativa Japonica Group]
Length = 299
Score = 124 bits (310), Expect = 2e-26
Identities = 57/77 (74%), Positives = 69/77 (89%)
Frame = +2
Query: 104 NRRRRNGYDQGRWRMNDRSRRAEREDSIRRTVYVSAIDYHVTEEKLAKIFSNYGEVVDCR 283
NRRRR+G++QGR R R+RRA+REDS+RRTVYVS ID VTE+KLA++FSN G+VVDCR
Sbjct: 85 NRRRRSGFNQGRRRTGGRTRRADREDSVRRTVYVSDIDQQVTEQKLAEVFSNCGQVVDCR 144
Query: 284 ICGDPHSILRFAFIEFS 334
ICGDPHS+LRFAFIEF+
Sbjct: 145 ICGDPHSVLRFAFIEFA 161
>ref|XP_004488716.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Cicer arietinum]
Length = 299
Score = 123 bits (309), Expect = 2e-26
Identities = 55/77 (71%), Positives = 68/77 (88%)
Frame = +2
Query: 104 NRRRRNGYDQGRWRMNDRSRRAEREDSIRRTVYVSAIDYHVTEEKLAKIFSNYGEVVDCR 283
NRRRRN + QGR R+N RS +A+REDS+RRTVYVS ID HVTEE+LA +F+N G+V+DCR
Sbjct: 84 NRRRRNNFTQGRRRLNGRSLKAQREDSVRRTVYVSDIDQHVTEERLAALFTNCGQVIDCR 143
Query: 284 ICGDPHSILRFAFIEFS 334
ICGDPHS+LRFAF+EF+
Sbjct: 144 ICGDPHSVLRFAFVEFA 160
>ref|NP_001042362.1| Os01g0209400 [Oryza sativa Japonica Group]
gi|56201519|dbj|BAD73038.1| RNA-binding protein -like
[Oryza sativa Japonica Group]
gi|56201749|dbj|BAD73106.1| RNA-binding protein -like
[Oryza sativa Japonica Group]
gi|113531893|dbj|BAF04276.1| Os01g0209400 [Oryza sativa
Japonica Group] gi|215737283|dbj|BAG96212.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 308
Score = 123 bits (308), Expect = 3e-26
Identities = 60/77 (77%), Positives = 69/77 (89%), Gaps = 1/77 (1%)
Frame = +2
Query: 107 RRRRNGY-DQGRWRMNDRSRRAEREDSIRRTVYVSAIDYHVTEEKLAKIFSNYGEVVDCR 283
RRRRNGY QGR RMN+R+R A+REDSIRRTVYVS ID+ VTEE+LA IF+N G+VVDCR
Sbjct: 94 RRRRNGYLSQGRRRMNERARHADREDSIRRTVYVSDIDHTVTEERLADIFANCGQVVDCR 153
Query: 284 ICGDPHSILRFAFIEFS 334
ICGDPHS+LRFAFIEF+
Sbjct: 154 ICGDPHSVLRFAFIEFA 170
>ref|NP_001130716.1| hypothetical protein [Zea mays] gi|194689926|gb|ACF79047.1| unknown
[Zea mays] gi|413954111|gb|AFW86760.1| hypothetical
protein ZEAMMB73_977651 [Zea mays]
Length = 365
Score = 123 bits (308), Expect = 3e-26
Identities = 59/80 (73%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
Frame = +2
Query: 98 QPNRRRRNGYDQGRWRM-NDRSRRAEREDSIRRTVYVSAIDYHVTEEKLAKIFSNYGEVV 274
QPNRRRRNG+ QGR RM R RRA+REDS+RRTVYVS +D HVTE+KLA++FS G+VV
Sbjct: 148 QPNRRRRNGFIQGRRRMMGARPRRADREDSVRRTVYVSDVDQHVTEQKLAEVFSTCGQVV 207
Query: 275 DCRICGDPHSILRFAFIEFS 334
DCRICGDP+S+LRFAFIEF+
Sbjct: 208 DCRICGDPNSVLRFAFIEFA 227
>ref|XP_002277842.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and nuclear
[Vitis vinifera] gi|296088694|emb|CBI38144.3| unnamed
protein product [Vitis vinifera]
Length = 292
Score = 123 bits (308), Expect = 3e-26
Identities = 56/77 (72%), Positives = 69/77 (89%)
Frame = +2
Query: 104 NRRRRNGYDQGRWRMNDRSRRAEREDSIRRTVYVSAIDYHVTEEKLAKIFSNYGEVVDCR 283
NRRRRN Y+QGR R++ R+ RA+REDSIRRTVYVS ID HVTEE+LA +FS+ G+VVDCR
Sbjct: 78 NRRRRNNYNQGRRRLSGRAFRAQREDSIRRTVYVSDIDQHVTEERLAALFSSCGQVVDCR 137
Query: 284 ICGDPHSILRFAFIEFS 334
+CGDPHS+LRFAF+EF+
Sbjct: 138 VCGDPHSVLRFAFVEFA 154
>ref|XP_002437116.1| hypothetical protein SORBIDRAFT_10g021290 [Sorghum bicolor]
gi|241915339|gb|EER88483.1| hypothetical protein
SORBIDRAFT_10g021290 [Sorghum bicolor]
Length = 364
Score = 122 bits (307), Expect = 4e-26
Identities = 59/80 (73%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
Frame = +2
Query: 98 QPNRRRRNGYDQGRWRM-NDRSRRAEREDSIRRTVYVSAIDYHVTEEKLAKIFSNYGEVV 274
QPNRRRRNG+ QGR RM R RR++REDS+RRTVYVS ID HVTE+KLA++FS G+VV
Sbjct: 147 QPNRRRRNGFIQGRRRMMGGRPRRSDREDSVRRTVYVSDIDQHVTEQKLAEVFSTCGQVV 206
Query: 275 DCRICGDPHSILRFAFIEFS 334
DCRICGDP+S+LRFAFIEF+
Sbjct: 207 DCRICGDPNSVLRFAFIEFA 226
>gb|ACG35035.1| CID11 [Zea mays]
Length = 378
Score = 122 bits (307), Expect = 4e-26
Identities = 59/80 (73%), Positives = 67/80 (83%), Gaps = 1/80 (1%)
Frame = +2
Query: 98 QPNRRRRNGYDQGRWR-MNDRSRRAEREDSIRRTVYVSAIDYHVTEEKLAKIFSNYGEVV 274
QPNRRRRN ++ GR R R RR +REDS+RRTVYVS ID HVTE+KLA++FSN G VV
Sbjct: 161 QPNRRRRNSFNHGRRRGAGGRPRRGDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGRVV 220
Query: 275 DCRICGDPHSILRFAFIEFS 334
DCRICGDPHS+LRFAFIEFS
Sbjct: 221 DCRICGDPHSVLRFAFIEFS 240
>ref|NP_001130545.1| uncharacterized protein LOC100191644 [Zea mays]
gi|194689440|gb|ACF78804.1| unknown [Zea mays]
gi|224030729|gb|ACN34440.1| unknown [Zea mays]
gi|413926010|gb|AFW65942.1| CID11 [Zea mays]
Length = 379
Score = 122 bits (307), Expect = 4e-26
Identities = 59/80 (73%), Positives = 67/80 (83%), Gaps = 1/80 (1%)
Frame = +2
Query: 98 QPNRRRRNGYDQGRWR-MNDRSRRAEREDSIRRTVYVSAIDYHVTEEKLAKIFSNYGEVV 274
QPNRRRRN ++ GR R R RR +REDS+RRTVYVS ID HVTE+KLA++FSN G VV
Sbjct: 162 QPNRRRRNSFNHGRRRGAGGRPRRGDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGRVV 221
Query: 275 DCRICGDPHSILRFAFIEFS 334
DCRICGDPHS+LRFAFIEFS
Sbjct: 222 DCRICGDPHSVLRFAFIEFS 241
>gb|EOY13696.1| CTC-interacting domain 9 [Theobroma cacao]
Length = 305
Score = 122 bits (306), Expect = 5e-26
Identities = 56/77 (72%), Positives = 68/77 (88%)
Frame = +2
Query: 104 NRRRRNGYDQGRWRMNDRSRRAEREDSIRRTVYVSAIDYHVTEEKLAKIFSNYGEVVDCR 283
NRRRRN Y+QGR R+N R+ RA+REDSIRRTVYVS ID +TEE+LA +FSN G+VVDCR
Sbjct: 91 NRRRRNNYNQGRRRLNGRAFRAQREDSIRRTVYVSDIDQTITEERLAGLFSNCGQVVDCR 150
Query: 284 ICGDPHSILRFAFIEFS 334
+CGDPHS+LRFAF+EF+
Sbjct: 151 VCGDPHSVLRFAFVEFA 167
>gb|EMT30952.1| Splicing factor, arginine/serine-rich 12 [Aegilops tauschii]
Length = 308
Score = 122 bits (306), Expect = 5e-26
Identities = 59/86 (68%), Positives = 71/86 (82%), Gaps = 7/86 (8%)
Frame = +2
Query: 98 QPNRRRRNGYDQGRWRMNDRSRRAEREDSIRRTVYVSAIDYHVTEEKLAKIFSNYGE--- 268
QPNRRRRNG++QGR RM R RR +REDS+RRTVYVS ID HVTE+KLA++FSN G+
Sbjct: 118 QPNRRRRNGFNQGRRRMGVRPRRTDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGQIFH 177
Query: 269 ----VVDCRICGDPHSILRFAFIEFS 334
VVDCRICGDP+S++RFAFIEF+
Sbjct: 178 DRTAVVDCRICGDPNSVMRFAFIEFA 203
>ref|XP_002529948.1| RNA-binding protein, putative [Ricinus communis]
gi|223530546|gb|EEF32425.1| RNA-binding protein,
putative [Ricinus communis]
Length = 281
Score = 121 bits (304), Expect = 8e-26
Identities = 54/77 (70%), Positives = 69/77 (89%)
Frame = +2
Query: 104 NRRRRNGYDQGRWRMNDRSRRAEREDSIRRTVYVSAIDYHVTEEKLAKIFSNYGEVVDCR 283
NRR+RN Y+QG+ R+N R+ RA+R+DSIRRTVYVS ID HVTEE+LA +FS+ G+VVDCR
Sbjct: 84 NRRKRNNYNQGKRRLNGRAYRAQRDDSIRRTVYVSDIDQHVTEERLAGLFSSCGQVVDCR 143
Query: 284 ICGDPHSILRFAFIEFS 334
+CGDPHS+LRFAF+EF+
Sbjct: 144 VCGDPHSVLRFAFVEFA 160