BLASTX nr result
ID: Zingiber25_contig00039953
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00039953
(395 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004972830.1| PREDICTED: probable RNA polymerase II transc... 97 2e-18
ref|XP_004972829.1| PREDICTED: probable RNA polymerase II transc... 97 2e-18
ref|XP_002443866.1| hypothetical protein SORBIDRAFT_07g003540 [S... 96 6e-18
gb|AFW61225.1| hypothetical protein ZEAMMB73_026868 [Zea mays] 94 2e-17
gb|AFW61224.1| BSD domain containing protein [Zea mays] 94 2e-17
gb|ACG24327.1| BSD domain containing protein [Zea mays] 94 2e-17
ref|NP_001061583.1| Os08g0338200 [Oryza sativa Japonica Group] g... 91 1e-16
gb|EEC83408.1| hypothetical protein OsI_28861 [Oryza sativa Indi... 91 1e-16
ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [A... 90 3e-16
gb|EPS73151.1| hypothetical protein M569_01605, partial [Genlise... 88 1e-15
gb|EMT19668.1| hypothetical protein F775_30844 [Aegilops tauschii] 86 4e-15
dbj|BAK05807.1| predicted protein [Hordeum vulgare subsp. vulgare] 86 4e-15
ref|XP_003573495.1| PREDICTED: probable RNA polymerase II transc... 86 7e-15
gb|ACF22789.1| transcription factor related protein [Brachypodiu... 86 7e-15
gb|EMS68190.1| hypothetical protein TRIUR3_14719 [Triticum urartu] 85 9e-15
gb|EMS48309.1| hypothetical protein TRIUR3_27691 [Triticum urartu] 83 4e-14
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc... 83 4e-14
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera] 83 4e-14
dbj|BAK04994.1| predicted protein [Hordeum vulgare subsp. vulgare] 82 6e-14
ref|XP_006589336.1| PREDICTED: probable RNA polymerase II transc... 82 1e-13
>ref|XP_004972830.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1-like isoform X2 [Setaria italica]
Length = 476
Score = 97.4 bits (241), Expect = 2e-18
Identities = 46/70 (65%), Positives = 60/70 (85%), Gaps = 1/70 (1%)
Frame = +2
Query: 188 MAVITMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSK-DG 364
M +T+ AKYKTT+K+PG PG+L+M +D F+FTPNDPRSA KL V+FR+IKGHKF+K DG
Sbjct: 1 MGSLTIGAKYKTTLKDPGTPGILRMNDDKFTFTPNDPRSAMKLNVEFRSIKGHKFNKVDG 60
Query: 365 SKQALLNLTQ 394
+K ALLNL++
Sbjct: 61 NKPALLNLSK 70
>ref|XP_004972829.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1-like isoform X1 [Setaria italica]
Length = 600
Score = 97.4 bits (241), Expect = 2e-18
Identities = 46/70 (65%), Positives = 60/70 (85%), Gaps = 1/70 (1%)
Frame = +2
Query: 188 MAVITMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSK-DG 364
M +T+ AKYKTT+K+PG PG+L+M +D F+FTPNDPRSA KL V+FR+IKGHKF+K DG
Sbjct: 1 MGSLTIGAKYKTTLKDPGTPGILRMNDDKFTFTPNDPRSAMKLNVEFRSIKGHKFNKVDG 60
Query: 365 SKQALLNLTQ 394
+K ALLNL++
Sbjct: 61 NKPALLNLSK 70
>ref|XP_002443866.1| hypothetical protein SORBIDRAFT_07g003540 [Sorghum bicolor]
gi|241940216|gb|EES13361.1| hypothetical protein
SORBIDRAFT_07g003540 [Sorghum bicolor]
Length = 600
Score = 95.5 bits (236), Expect = 6e-18
Identities = 45/70 (64%), Positives = 58/70 (82%), Gaps = 1/70 (1%)
Frame = +2
Query: 188 MAVITMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSK-DG 364
M +T+ AKYKTT+K+PG PG+L+M +D F+FTPNDPRSA K VDFR IKGHKF+K +G
Sbjct: 1 MGSMTIGAKYKTTIKDPGTPGILRMNDDRFTFTPNDPRSAMKFNVDFRTIKGHKFNKVEG 60
Query: 365 SKQALLNLTQ 394
+K ALLNL++
Sbjct: 61 NKAALLNLSK 70
>gb|AFW61225.1| hypothetical protein ZEAMMB73_026868 [Zea mays]
Length = 476
Score = 94.0 bits (232), Expect = 2e-17
Identities = 45/70 (64%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
Frame = +2
Query: 188 MAVITMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSK-DG 364
M +T+ AKYKTT+K+PG PG+L+M D F+FTPNDPRSA K VDFR IKGHKF+K +G
Sbjct: 1 MGSMTIGAKYKTTIKDPGTPGILRMNGDRFTFTPNDPRSAMKFNVDFRTIKGHKFNKVEG 60
Query: 365 SKQALLNLTQ 394
+K ALLNL++
Sbjct: 61 NKAALLNLSK 70
>gb|AFW61224.1| BSD domain containing protein [Zea mays]
Length = 600
Score = 94.0 bits (232), Expect = 2e-17
Identities = 45/70 (64%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
Frame = +2
Query: 188 MAVITMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSK-DG 364
M +T+ AKYKTT+K+PG PG+L+M D F+FTPNDPRSA K VDFR IKGHKF+K +G
Sbjct: 1 MGSMTIGAKYKTTIKDPGTPGILRMNGDRFTFTPNDPRSAMKFNVDFRTIKGHKFNKVEG 60
Query: 365 SKQALLNLTQ 394
+K ALLNL++
Sbjct: 61 NKAALLNLSK 70
>gb|ACG24327.1| BSD domain containing protein [Zea mays]
Length = 600
Score = 94.0 bits (232), Expect = 2e-17
Identities = 45/70 (64%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
Frame = +2
Query: 188 MAVITMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSK-DG 364
M +T+ AKYKTT+K+PG PG+L+M D F+FTPNDPRSA K VDFR IKGHKF+K +G
Sbjct: 1 MGSMTIGAKYKTTIKDPGTPGILRMNGDRFTFTPNDPRSAMKFNVDFRTIKGHKFNKVEG 60
Query: 365 SKQALLNLTQ 394
+K ALLNL++
Sbjct: 61 NKAALLNLSK 70
>ref|NP_001061583.1| Os08g0338200 [Oryza sativa Japonica Group]
gi|38636938|dbj|BAD03200.1| unknown protein [Oryza
sativa Japonica Group] gi|113623552|dbj|BAF23497.1|
Os08g0338200 [Oryza sativa Japonica Group]
gi|215686948|dbj|BAG90767.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 604
Score = 91.3 bits (225), Expect = 1e-16
Identities = 48/72 (66%), Positives = 59/72 (81%), Gaps = 3/72 (4%)
Frame = +2
Query: 188 MAVITMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSK-DG 364
M +T+ AKYKTT+K+PG GVL+M ED F+FTP+DPRSA KL VDFR+IKGHKF+K DG
Sbjct: 1 MGSMTIGAKYKTTLKDPGTTGVLRMNEDKFTFTPHDPRSAMKLNVDFRSIKGHKFNKVDG 60
Query: 365 SKQA--LLNLTQ 394
SK A LLNL++
Sbjct: 61 SKPAPPLLNLSK 72
>gb|EEC83408.1| hypothetical protein OsI_28861 [Oryza sativa Indica Group]
gi|222640385|gb|EEE68517.1| hypothetical protein
OsJ_26954 [Oryza sativa Japonica Group]
Length = 625
Score = 91.3 bits (225), Expect = 1e-16
Identities = 48/72 (66%), Positives = 59/72 (81%), Gaps = 3/72 (4%)
Frame = +2
Query: 188 MAVITMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSK-DG 364
M +T+ AKYKTT+K+PG GVL+M ED F+FTP+DPRSA KL VDFR+IKGHKF+K DG
Sbjct: 1 MGSMTIGAKYKTTLKDPGTTGVLRMNEDKFTFTPHDPRSAMKLNVDFRSIKGHKFNKVDG 60
Query: 365 SKQA--LLNLTQ 394
SK A LLNL++
Sbjct: 61 SKPAPPLLNLSK 72
>ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [Amborella trichopoda]
gi|548861733|gb|ERN19104.1| hypothetical protein
AMTR_s00061p00135540 [Amborella trichopoda]
Length = 626
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/68 (67%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
Frame = +2
Query: 194 VITMLAKYKTT-VKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSKDGSK 370
V+TM AKYK + K+PG+ GVL M +D F F PNDP S+ KL V FR IKGHKFSK+GSK
Sbjct: 5 VVTMRAKYKASGPKDPGVAGVLTMRDDSFIFRPNDPSSSVKLDVSFRCIKGHKFSKEGSK 64
Query: 371 QALLNLTQ 394
QALLNLTQ
Sbjct: 65 QALLNLTQ 72
>gb|EPS73151.1| hypothetical protein M569_01605, partial [Genlisea aurea]
Length = 281
Score = 87.8 bits (216), Expect = 1e-15
Identities = 42/62 (67%), Positives = 52/62 (83%), Gaps = 1/62 (1%)
Frame = +2
Query: 209 AKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSKDG-SKQALLN 385
AKYK+TVK+PG+PGV+KM + F PNDP+SA KLKVD R +KGHKF+K+G SKQA+LN
Sbjct: 10 AKYKSTVKDPGVPGVIKMNMETIIFLPNDPKSAMKLKVDCRLLKGHKFTKEGSSKQAMLN 69
Query: 386 LT 391
LT
Sbjct: 70 LT 71
>gb|EMT19668.1| hypothetical protein F775_30844 [Aegilops tauschii]
Length = 611
Score = 86.3 bits (212), Expect = 4e-15
Identities = 46/72 (63%), Positives = 55/72 (76%), Gaps = 3/72 (4%)
Frame = +2
Query: 188 MAVITMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSK-DG 364
M +T+ AKYKTT+K+PG GVL+M ED FTPNDPRS KL VDFR+IKGHKF+K DG
Sbjct: 1 MGTMTIGAKYKTTLKDPGHGGVLRMSEDKLIFTPNDPRSLMKLNVDFRSIKGHKFNKVDG 60
Query: 365 SKQA--LLNLTQ 394
SK LLNL++
Sbjct: 61 SKPTPPLLNLSK 72
>dbj|BAK05807.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 86.3 bits (212), Expect = 4e-15
Identities = 46/72 (63%), Positives = 55/72 (76%), Gaps = 3/72 (4%)
Frame = +2
Query: 188 MAVITMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSK-DG 364
M +T+ AKYKTT+K+PG GVL+M ED FTPNDPRS KL VDFR+IKGHKF+K DG
Sbjct: 1 MGTMTIGAKYKTTLKDPGHGGVLRMSEDKLIFTPNDPRSLMKLSVDFRSIKGHKFNKVDG 60
Query: 365 SKQA--LLNLTQ 394
SK LLNL++
Sbjct: 61 SKPTPPLLNLSK 72
>ref|XP_003573495.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1-like [Brachypodium distachyon]
Length = 602
Score = 85.5 bits (210), Expect = 7e-15
Identities = 45/72 (62%), Positives = 54/72 (75%), Gaps = 3/72 (4%)
Frame = +2
Query: 188 MAVITMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSK-DG 364
M +T+ AKYKTT+K+PG GVL+M ED +F PNDPRS KL VDFR IKGHKF+K DG
Sbjct: 1 MGTMTIGAKYKTTLKDPGTTGVLRMNEDKLAFIPNDPRSLMKLNVDFRTIKGHKFNKVDG 60
Query: 365 SKQA--LLNLTQ 394
SK LLNL++
Sbjct: 61 SKPTPPLLNLSK 72
>gb|ACF22789.1| transcription factor related protein [Brachypodium distachyon]
Length = 576
Score = 85.5 bits (210), Expect = 7e-15
Identities = 45/72 (62%), Positives = 54/72 (75%), Gaps = 3/72 (4%)
Frame = +2
Query: 188 MAVITMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSK-DG 364
M +T+ AKYKTT+K+PG GVL+M ED +F PNDPRS KL VDFR IKGHKF+K DG
Sbjct: 1 MGTMTIGAKYKTTLKDPGTTGVLRMNEDKLAFIPNDPRSLMKLNVDFRTIKGHKFNKVDG 60
Query: 365 SKQA--LLNLTQ 394
SK LLNL++
Sbjct: 61 SKPTPPLLNLSK 72
>gb|EMS68190.1| hypothetical protein TRIUR3_14719 [Triticum urartu]
Length = 667
Score = 85.1 bits (209), Expect = 9e-15
Identities = 45/72 (62%), Positives = 55/72 (76%), Gaps = 3/72 (4%)
Frame = +2
Query: 188 MAVITMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSK-DG 364
M +T+ AKYKTT+++PG GVL+M ED FTPNDPRS KL VDFR+IKGHKF+K DG
Sbjct: 1 MGTMTIGAKYKTTLRDPGHGGVLRMSEDKLIFTPNDPRSLMKLNVDFRSIKGHKFNKVDG 60
Query: 365 SKQA--LLNLTQ 394
SK LLNL++
Sbjct: 61 SKPTPPLLNLSK 72
>gb|EMS48309.1| hypothetical protein TRIUR3_27691 [Triticum urartu]
Length = 592
Score = 82.8 bits (203), Expect = 4e-14
Identities = 44/72 (61%), Positives = 54/72 (75%), Gaps = 3/72 (4%)
Frame = +2
Query: 188 MAVITMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSK-DG 364
M +T+ A+YK T+K+ G GVL+M ED +FTPNDPRS KL VDFR IKGHKF+K DG
Sbjct: 1 MGTMTIGARYKATLKDRGTGGVLRMSEDKLTFTPNDPRSLMKLSVDFRTIKGHKFNKVDG 60
Query: 365 SK--QALLNLTQ 394
SK ALLNL++
Sbjct: 61 SKPTPALLNLSK 72
>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 [Vitis vinifera]
gi|296090002|emb|CBI39821.3| unnamed protein product
[Vitis vinifera]
Length = 602
Score = 82.8 bits (203), Expect = 4e-14
Identities = 42/63 (66%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Frame = +2
Query: 209 AKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSKDGS-KQALLN 385
A+YKT+VK+ G+ GVLKM ED F F PNDP S+ + V+FR IKGHKFSK GS K ALLN
Sbjct: 9 ARYKTSVKDSGVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGGSNKPALLN 68
Query: 386 LTQ 394
LTQ
Sbjct: 69 LTQ 71
>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
Length = 735
Score = 82.8 bits (203), Expect = 4e-14
Identities = 42/63 (66%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Frame = +2
Query: 209 AKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSKDGS-KQALLN 385
A+YKT+VK+ G+ GVLKM ED F F PNDP S+ + V+FR IKGHKFSK GS K ALLN
Sbjct: 9 ARYKTSVKDSGVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGGSNKPALLN 68
Query: 386 LTQ 394
LTQ
Sbjct: 69 LTQ 71
>dbj|BAK04994.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 82.4 bits (202), Expect = 6e-14
Identities = 44/68 (64%), Positives = 53/68 (77%), Gaps = 3/68 (4%)
Frame = +2
Query: 200 TMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSK-DGSK-- 370
T+ AKYK T+K+ G GVL+M ED F+FTPNDPRS KL VDF+ IKGHKF+K DGSK
Sbjct: 1 TIGAKYKATLKDRGTGGVLRMSEDKFTFTPNDPRSLMKLSVDFQTIKGHKFNKVDGSKPT 60
Query: 371 QALLNLTQ 394
ALLNL++
Sbjct: 61 PALLNLSK 68
>ref|XP_006589336.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-3-like isoform X5 [Glycine max]
Length = 523
Score = 81.6 bits (200), Expect = 1e-13
Identities = 41/61 (67%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Frame = +2
Query: 209 AKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSKDGSKQ-ALLN 385
AKYKTTVK+PG PGVLK+ +D F F PNDP S KL V+FR I+GHK +K+GSKQ LLN
Sbjct: 10 AKYKTTVKDPGTPGVLKLTQDRFVFKPNDPTSKTKLDVEFRFIQGHKVTKEGSKQPPLLN 69
Query: 386 L 388
L
Sbjct: 70 L 70