BLASTX nr result

ID: Zingiber25_contig00039950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00039950
         (480 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308925.2| transcriptional activator family protein [Po...    61   2e-07
ref|XP_006489869.1| PREDICTED: DNA helicase INO80-like [Citrus s...    60   2e-07
ref|XP_002323271.2| transcriptional activator family protein [Po...    60   2e-07
ref|XP_006421159.1| hypothetical protein CICLE_v10004142mg [Citr...    60   3e-07
ref|XP_006421158.1| hypothetical protein CICLE_v10004142mg [Citr...    60   3e-07

>ref|XP_002308925.2| transcriptional activator family protein [Populus trichocarpa]
            gi|550335455|gb|EEE92448.2| transcriptional activator
            family protein [Populus trichocarpa]
          Length = 1483

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 35/91 (38%), Positives = 48/91 (52%)
 Frame = +1

Query: 4    PVENDLGKSTHNRKRKSSSQKHNPSKLQNTRKTAAYVAEPDEPSPSGYEEDHPPDQRPKR 183
            P E+     ++N+KRK++S K    K +N++K        D      +  D P  QRPKR
Sbjct: 1382 PSEDTEKLKSNNKKRKAASDKQITPKPRNSQKNELNSTSMDYELDDPFLNDEPQSQRPKR 1441

Query: 184  AKRPTKSVNENLEPAYNSVANTAVD*NSFEY 276
             KRP KSVNE LEPA+   A   VD +  +Y
Sbjct: 1442 LKRPKKSVNEKLEPAF--TATPQVDSSQMQY 1470


>ref|XP_006489869.1| PREDICTED: DNA helicase INO80-like [Citrus sinensis]
          Length = 1524

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
 Frame = +1

Query: 16   DLGK-STHNRKRKSSSQKHNPSKLQNTRKT---AAYVAEPDEPSPSGYEEDHPPDQRPKR 183
            DL K S+ N+KRK++S K    K ++T+KT   A+ V + +   P   +   P  QRPKR
Sbjct: 1428 DLEKASSSNKKRKAASGKQTTPKARSTQKTNEPASTVMDYELDDP--LQATDPQSQRPKR 1485

Query: 184  AKRPTKSVNENLEPAYNSVANT 249
             KRP KS+NENLEPA+ +  +T
Sbjct: 1486 VKRPKKSINENLEPAFTATPST 1507


>ref|XP_002323271.2| transcriptional activator family protein [Populus trichocarpa]
            gi|550320801|gb|EEF05032.2| transcriptional activator
            family protein [Populus trichocarpa]
          Length = 1535

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 33/84 (39%), Positives = 47/84 (55%)
 Frame = +1

Query: 25   KSTHNRKRKSSSQKHNPSKLQNTRKTAAYVAEPDEPSPSGYEEDHPPDQRPKRAKRPTKS 204
            KS ++ KRK++S K   SK +N++K     +  D      +    P  QRPKR KRP KS
Sbjct: 1441 KSPNSNKRKAASDKQITSKPRNSQKNEPNSSPMDYELDDPFPNSEPQSQRPKRLKRPKKS 1500

Query: 205  VNENLEPAYNSVANTAVD*NSFEY 276
            VNE LEPA+   A  ++D +  +Y
Sbjct: 1501 VNEKLEPAF--TATPSIDSSQIQY 1522


>ref|XP_006421159.1| hypothetical protein CICLE_v10004142mg [Citrus clementina]
            gi|557523032|gb|ESR34399.1| hypothetical protein
            CICLE_v10004142mg [Citrus clementina]
          Length = 1524

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
 Frame = +1

Query: 16   DLGK-STHNRKRKSSSQKHNPSKLQNTRKT---AAYVAEPDEPSPSGYEEDHPPDQRPKR 183
            DL K S+ N+KRK++S K    K ++T+KT   A+ V + +   P   +   P  QRPKR
Sbjct: 1428 DLEKASSSNKKRKAASGKQTTPKARSTQKTNEPASTVMDYELDDP--LQAADPQSQRPKR 1485

Query: 184  AKRPTKSVNENLEPAYNSVANT 249
             KRP KS+NENLEPA+ +  +T
Sbjct: 1486 VKRPKKSINENLEPAFTATPST 1507


>ref|XP_006421158.1| hypothetical protein CICLE_v10004142mg [Citrus clementina]
            gi|557523031|gb|ESR34398.1| hypothetical protein
            CICLE_v10004142mg [Citrus clementina]
          Length = 1059

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
 Frame = +1

Query: 16   DLGK-STHNRKRKSSSQKHNPSKLQNTRKT---AAYVAEPDEPSPSGYEEDHPPDQRPKR 183
            DL K S+ N+KRK++S K    K ++T+KT   A+ V + +   P   +   P  QRPKR
Sbjct: 963  DLEKASSSNKKRKAASGKQTTPKARSTQKTNEPASTVMDYELDDP--LQAADPQSQRPKR 1020

Query: 184  AKRPTKSVNENLEPAYNSVANT 249
             KRP KS+NENLEPA+ +  +T
Sbjct: 1021 VKRPKKSINENLEPAFTATPST 1042


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