BLASTX nr result
ID: Zingiber25_contig00039680
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00039680
(320 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006447692.1| hypothetical protein CICLE_v10014827mg [Citr... 72 6e-11
ref|XP_006375548.1| hypothetical protein POPTR_0014s15940g [Popu... 70 4e-10
ref|XP_002320500.1| TATA box-binding protein-associated factor [... 70 4e-10
ref|XP_002528944.1| transcription initiation factor tfiid, putat... 69 8e-10
ref|XP_002298845.1| hypothetical protein POPTR_0001s37010g [Popu... 68 1e-09
ref|XP_006839099.1| hypothetical protein AMTR_s00090p00135570 [A... 67 2e-09
gb|EOY12200.1| Transcription initiation factor tfiid, putative [... 66 5e-09
ref|XP_002264290.1| PREDICTED: transcription initiation factor T... 64 2e-08
gb|EXB81098.1| Transcription initiation factor TFIID subunit 6 [... 64 2e-08
gb|EMJ16839.1| hypothetical protein PRUPE_ppa003876mg [Prunus pe... 64 3e-08
gb|EXB78675.1| Transcription initiation factor TFIID subunit 6 [... 63 5e-08
ref|XP_004149597.1| PREDICTED: transcription initiation factor T... 63 5e-08
ref|XP_003577929.1| PREDICTED: transcription initiation factor T... 62 8e-08
ref|XP_004968859.1| PREDICTED: transcription initiation factor T... 61 2e-07
gb|AFW88946.1| putative TATA binding protein family protein [Zea... 60 3e-07
gb|ACL54361.1| unknown [Zea mays] gi|413956299|gb|AFW88948.1| pu... 60 3e-07
ref|NP_001137111.1| uncharacterized protein LOC100217288 [Zea ma... 60 3e-07
ref|XP_006352529.1| PREDICTED: transcription initiation factor T... 59 5e-07
dbj|BAJ93783.1| predicted protein [Hordeum vulgare subsp. vulgare] 59 5e-07
ref|XP_004304060.1| PREDICTED: transcription initiation factor T... 59 9e-07
>ref|XP_006447692.1| hypothetical protein CICLE_v10014827mg [Citrus clementina]
gi|568830573|ref|XP_006469568.1| PREDICTED:
transcription initiation factor TFIID subunit 6-like
[Citrus sinensis] gi|557550303|gb|ESR60932.1|
hypothetical protein CICLE_v10014827mg [Citrus
clementina]
Length = 542
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/55 (63%), Positives = 44/55 (80%)
Frame = -1
Query: 233 SRREKGGSGAPKGSAVLAQAWKEDLDAGNLLLSLFQLFGEGILSFTPSLEKSFFL 69
S+R+KG S A K SA+L Q WK+DL++G LL+SLF+LFGEGILSF P+ E S FL
Sbjct: 488 SKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAPEMSLFL 542
>ref|XP_006375548.1| hypothetical protein POPTR_0014s15940g [Populus trichocarpa]
gi|550324300|gb|ERP53345.1| hypothetical protein
POPTR_0014s15940g [Populus trichocarpa]
Length = 536
Score = 69.7 bits (169), Expect = 4e-10
Identities = 33/55 (60%), Positives = 45/55 (81%)
Frame = -1
Query: 233 SRREKGGSGAPKGSAVLAQAWKEDLDAGNLLLSLFQLFGEGILSFTPSLEKSFFL 69
++++KG S A K SA+L+Q WK+DL++G+LL+SLF+LFGE ILSF PS E S FL
Sbjct: 482 NQKDKGDSQAIKTSAILSQVWKDDLNSGHLLVSLFELFGESILSFIPSPEMSLFL 536
>ref|XP_002320500.1| TATA box-binding protein-associated factor [Populus trichocarpa]
gi|222861273|gb|EEE98815.1| TATA box-binding
protein-associated factor [Populus trichocarpa]
Length = 532
Score = 69.7 bits (169), Expect = 4e-10
Identities = 33/55 (60%), Positives = 45/55 (81%)
Frame = -1
Query: 233 SRREKGGSGAPKGSAVLAQAWKEDLDAGNLLLSLFQLFGEGILSFTPSLEKSFFL 69
++++KG S A K SA+L+Q WK+DL++G+LL+SLF+LFGE ILSF PS E S FL
Sbjct: 478 NQKDKGDSQAIKTSAILSQVWKDDLNSGHLLVSLFELFGESILSFIPSPEMSLFL 532
>ref|XP_002528944.1| transcription initiation factor tfiid, putative [Ricinus communis]
gi|223531590|gb|EEF33418.1| transcription initiation
factor tfiid, putative [Ricinus communis]
Length = 542
Score = 68.6 bits (166), Expect = 8e-10
Identities = 34/55 (61%), Positives = 39/55 (70%)
Frame = -1
Query: 233 SRREKGGSGAPKGSAVLAQAWKEDLDAGNLLLSLFQLFGEGILSFTPSLEKSFFL 69
+ R KG G K SA+L Q WK+DL +G LL SLF+LFGEGILSF PS E S FL
Sbjct: 488 TERVKGDGGVMKTSAILNQVWKDDLKSGQLLASLFELFGEGILSFIPSPEMSLFL 542
>ref|XP_002298845.1| hypothetical protein POPTR_0001s37010g [Populus trichocarpa]
gi|222846103|gb|EEE83650.1| hypothetical protein
POPTR_0001s37010g [Populus trichocarpa]
Length = 529
Score = 68.2 bits (165), Expect = 1e-09
Identities = 36/54 (66%), Positives = 40/54 (74%)
Frame = -1
Query: 230 RREKGGSGAPKGSAVLAQAWKEDLDAGNLLLSLFQLFGEGILSFTPSLEKSFFL 69
RRE G G K S VLAQAWKED+DAG+LL SLF+LF E + SFTP E SFFL
Sbjct: 477 RREISGRGL-KTSTVLAQAWKEDMDAGHLLASLFELFSESMFSFTPKPELSFFL 529
>ref|XP_006839099.1| hypothetical protein AMTR_s00090p00135570 [Amborella trichopoda]
gi|548841615|gb|ERN01668.1| hypothetical protein
AMTR_s00090p00135570 [Amborella trichopoda]
Length = 548
Score = 67.0 bits (162), Expect = 2e-09
Identities = 33/59 (55%), Positives = 39/59 (66%)
Frame = -1
Query: 245 DSIGSRREKGGSGAPKGSAVLAQAWKEDLDAGNLLLSLFQLFGEGILSFTPSLEKSFFL 69
DS+G R G GA S VL QAWK+D+DAG LL SLF+LFGE + SF E+ FFL
Sbjct: 490 DSVGPMRGVAGRGALNASKVLGQAWKDDMDAGRLLASLFELFGESMFSFIQPPERLFFL 548
>gb|EOY12200.1| Transcription initiation factor tfiid, putative [Theobroma cacao]
Length = 535
Score = 65.9 bits (159), Expect = 5e-09
Identities = 37/62 (59%), Positives = 41/62 (66%)
Frame = -1
Query: 254 VSIDSIGSRREKGGSGAPKGSAVLAQAWKEDLDAGNLLLSLFQLFGEGILSFTPSLEKSF 75
+S D+I R G K S VLAQAWKED AGNLL SLF+LFGE +LSFTP E S
Sbjct: 476 LSNDNISGREASGR--VLKTSTVLAQAWKEDTHAGNLLASLFELFGESMLSFTPKPELSI 533
Query: 74 FL 69
FL
Sbjct: 534 FL 535
>ref|XP_002264290.1| PREDICTED: transcription initiation factor TFIID subunit 6 [Vitis
vinifera] gi|297739126|emb|CBI28777.3| unnamed protein
product [Vitis vinifera]
Length = 543
Score = 64.3 bits (155), Expect = 2e-08
Identities = 33/61 (54%), Positives = 42/61 (68%)
Frame = -1
Query: 251 SIDSIGSRREKGGSGAPKGSAVLAQAWKEDLDAGNLLLSLFQLFGEGILSFTPSLEKSFF 72
+I R+ KG S A K SAVL Q W++DL +G+LL+SLF+LFGE IL F P+ E S F
Sbjct: 483 NISDSRDRKGKGDSRALKMSAVLTQTWRDDLKSGHLLVSLFELFGESILPFIPAPEMSLF 542
Query: 71 L 69
L
Sbjct: 543 L 543
>gb|EXB81098.1| Transcription initiation factor TFIID subunit 6 [Morus notabilis]
Length = 586
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/55 (60%), Positives = 41/55 (74%)
Frame = -1
Query: 233 SRREKGGSGAPKGSAVLAQAWKEDLDAGNLLLSLFQLFGEGILSFTPSLEKSFFL 69
S RE GG K S+VLAQAWKE++DAG+L+ SLF+ FG+ + SFTP E SFFL
Sbjct: 533 SGRELGGQTG-KTSSVLAQAWKENMDAGHLVSSLFEFFGQSMFSFTPKPELSFFL 586
>gb|EMJ16839.1| hypothetical protein PRUPE_ppa003876mg [Prunus persica]
Length = 543
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/55 (54%), Positives = 41/55 (74%)
Frame = -1
Query: 233 SRREKGGSGAPKGSAVLAQAWKEDLDAGNLLLSLFQLFGEGILSFTPSLEKSFFL 69
SRR++ + K SA+L Q WK+DL++G+LL+SLF+LFGE ILSF P+ E FL
Sbjct: 489 SRRDRASGRSLKKSALLTQVWKDDLNSGHLLVSLFELFGEDILSFVPAPEMCLFL 543
>gb|EXB78675.1| Transcription initiation factor TFIID subunit 6 [Morus notabilis]
Length = 541
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/57 (50%), Positives = 40/57 (70%)
Frame = -1
Query: 239 IGSRREKGGSGAPKGSAVLAQAWKEDLDAGNLLLSLFQLFGEGILSFTPSLEKSFFL 69
+ + KG K SA+L Q WK+DL++G+LL+SLF+LFGE ILSF P+ E S F+
Sbjct: 485 VSDTKSKGNCKYLKTSAILTQVWKDDLNSGHLLVSLFELFGESILSFIPAPEMSLFI 541
>ref|XP_004149597.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Cucumis sativus] gi|449503215|ref|XP_004161891.1|
PREDICTED: transcription initiation factor TFIID subunit
6-like [Cucumis sativus]
Length = 535
Score = 62.8 bits (151), Expect = 5e-08
Identities = 31/44 (70%), Positives = 33/44 (75%)
Frame = -1
Query: 200 KGSAVLAQAWKEDLDAGNLLLSLFQLFGEGILSFTPSLEKSFFL 69
KGS LA AWKEDLDAG L+ SLFQLFGE + SF P E SFFL
Sbjct: 492 KGSTALAIAWKEDLDAGPLITSLFQLFGEDLFSFIPKPELSFFL 535
>ref|XP_003577929.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Brachypodium distachyon]
Length = 545
Score = 62.0 bits (149), Expect = 8e-08
Identities = 32/61 (52%), Positives = 42/61 (68%)
Frame = -1
Query: 251 SIDSIGSRREKGGSGAPKGSAVLAQAWKEDLDAGNLLLSLFQLFGEGILSFTPSLEKSFF 72
SI + RR++G + A + SAVL QAWKED DAG+LL SL+++FGE I SF E S F
Sbjct: 485 SITQVPIRRDQGNNHAQRVSAVLRQAWKEDQDAGHLLESLYEVFGEAIFSFIQPPEISIF 544
Query: 71 L 69
+
Sbjct: 545 V 545
>ref|XP_004968859.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Setaria italica]
Length = 540
Score = 60.8 bits (146), Expect = 2e-07
Identities = 33/61 (54%), Positives = 40/61 (65%)
Frame = -1
Query: 251 SIDSIGSRREKGGSGAPKGSAVLAQAWKEDLDAGNLLLSLFQLFGEGILSFTPSLEKSFF 72
SI S RR++G A K S VL QAWKED DAG+LL SL+++FGE I SF E S F
Sbjct: 480 SIPSAVIRRDQGSDLAQKVSTVLRQAWKEDQDAGHLLGSLYEVFGEAIFSFVQPPEMSLF 539
Query: 71 L 69
+
Sbjct: 540 V 540
>gb|AFW88946.1| putative TATA binding protein family protein [Zea mays]
Length = 334
Score = 60.1 bits (144), Expect = 3e-07
Identities = 32/61 (52%), Positives = 40/61 (65%)
Frame = -1
Query: 251 SIDSIGSRREKGGSGAPKGSAVLAQAWKEDLDAGNLLLSLFQLFGEGILSFTPSLEKSFF 72
SI S RR++G A + SAVL QAWKED D G+LL SL+++FGE I SF E S F
Sbjct: 274 SIPSAAVRRDQGSDLAQRVSAVLRQAWKEDQDTGHLLGSLYEVFGEAIFSFVQPPEISLF 333
Query: 71 L 69
+
Sbjct: 334 V 334
>gb|ACL54361.1| unknown [Zea mays] gi|413956299|gb|AFW88948.1| putative TATA
binding protein family protein [Zea mays]
Length = 545
Score = 60.1 bits (144), Expect = 3e-07
Identities = 32/61 (52%), Positives = 40/61 (65%)
Frame = -1
Query: 251 SIDSIGSRREKGGSGAPKGSAVLAQAWKEDLDAGNLLLSLFQLFGEGILSFTPSLEKSFF 72
SI S RR++G A + SAVL QAWKED D G+LL SL+++FGE I SF E S F
Sbjct: 485 SIPSAAVRRDQGSDLAQRVSAVLRQAWKEDQDTGHLLGSLYEVFGEAIFSFVQPPEISLF 544
Query: 71 L 69
+
Sbjct: 545 V 545
>ref|NP_001137111.1| uncharacterized protein LOC100217288 [Zea mays]
gi|194698392|gb|ACF83280.1| unknown [Zea mays]
Length = 107
Score = 60.1 bits (144), Expect = 3e-07
Identities = 32/61 (52%), Positives = 40/61 (65%)
Frame = -1
Query: 251 SIDSIGSRREKGGSGAPKGSAVLAQAWKEDLDAGNLLLSLFQLFGEGILSFTPSLEKSFF 72
SI S RR++G A + SAVL QAWKED D G+LL SL+++FGE I SF E S F
Sbjct: 47 SIPSAAVRRDQGSDLAQRVSAVLRQAWKEDQDTGHLLGSLYEVFGEAIFSFVQPPEISLF 106
Query: 71 L 69
+
Sbjct: 107 V 107
>ref|XP_006352529.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Solanum tuberosum]
Length = 546
Score = 59.3 bits (142), Expect = 5e-07
Identities = 33/58 (56%), Positives = 39/58 (67%)
Frame = -1
Query: 242 SIGSRREKGGSGAPKGSAVLAQAWKEDLDAGNLLLSLFQLFGEGILSFTPSLEKSFFL 69
+IG R G G K S +L QAWKEDLDA LL SLF+ FGE + +FTPS E +FFL
Sbjct: 490 TIGRRDMTAGQGQ-KTSVLLDQAWKEDLDAVRLLPSLFECFGERMFTFTPSPELAFFL 546
>dbj|BAJ93783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 547
Score = 59.3 bits (142), Expect = 5e-07
Identities = 31/54 (57%), Positives = 38/54 (70%)
Frame = -1
Query: 230 RREKGGSGAPKGSAVLAQAWKEDLDAGNLLLSLFQLFGEGILSFTPSLEKSFFL 69
RR++G + A + SAVL QAWKED DAG+LL SL ++FGE I SF E S FL
Sbjct: 494 RRDQGSNHAQRVSAVLRQAWKEDQDAGHLLGSLHEVFGEAIFSFIQPPELSIFL 547
>ref|XP_004304060.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Fragaria vesca subsp. vesca]
Length = 542
Score = 58.5 bits (140), Expect = 9e-07
Identities = 32/57 (56%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Frame = -1
Query: 233 SRREKGGSGAP--KGSAVLAQAWKEDLDAGNLLLSLFQLFGEGILSFTPSLEKSFFL 69
SR G+ A K SAVL Q WK++L++G LL+SLFQLFGE IL F P+ E S FL
Sbjct: 486 SRGRSNGADAQSLKKSAVLNQVWKDELNSGKLLVSLFQLFGEDILPFIPAPEMSLFL 542