BLASTX nr result
ID: Zingiber25_contig00039519
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00039519
(581 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI16093.3| unnamed protein product [Vitis vinifera] 106 5e-21
ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containi... 106 5e-21
emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera] 106 5e-21
gb|EEE58776.1| hypothetical protein OsJ_10296 [Oryza sativa Japo... 104 1e-20
gb|EEC74947.1| hypothetical protein OsI_10926 [Oryza sativa Indi... 104 1e-20
ref|NP_001049690.1| Os03g0271300 [Oryza sativa Japonica Group] g... 104 1e-20
gb|ABF95212.1| pentatricopeptide, putative, expressed [Oryza sat... 104 1e-20
gb|AAP06869.1| chloroplast import-associated channel protein hom... 104 1e-20
gb|EMS66882.1| hypothetical protein TRIUR3_05694 [Triticum urartu] 104 2e-20
ref|XP_004295975.1| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20
gb|EMT05023.1| hypothetical protein F775_06976 [Aegilops tauschii] 103 3e-20
ref|XP_006649833.1| PREDICTED: pentatricopeptide repeat-containi... 102 5e-20
ref|XP_004987068.1| PREDICTED: pentatricopeptide repeat-containi... 100 5e-19
gb|EMJ09784.1| hypothetical protein PRUPE_ppa023060mg [Prunus pe... 98 1e-18
ref|XP_003561784.1| PREDICTED: pentatricopeptide repeat-containi... 97 3e-18
gb|EXC10706.1| hypothetical protein L484_025290 [Morus notabilis] 96 5e-18
ref|XP_006358719.1| PREDICTED: pentatricopeptide repeat-containi... 96 9e-18
ref|XP_002319471.1| pentatricopeptide repeat-containing family p... 95 1e-17
dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containi... 95 1e-17
ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group] g... 95 1e-17
>emb|CBI16093.3| unnamed protein product [Vitis vinifera]
Length = 702
Score = 106 bits (264), Expect = 5e-21
Identities = 55/106 (51%), Positives = 65/106 (61%)
Frame = +3
Query: 3 HYACMVDMLGRAGELTEACDLIAEMPMEPDAFVWGALLAASRSHSNIEXXXXXXXXXXXX 182
HYACMVD+LGRAG+L+EA DLI MP+EPD FVWGALL A R+H NIE
Sbjct: 595 HYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFEL 654
Query: 183 EPDSAGSCLLLSNALADAGRRRDAVQVXXXXXXXXXXXXXXXSWLE 320
EP+S GS LLLSN ADAGR +A ++ SW+E
Sbjct: 655 EPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 700
>ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Vitis vinifera]
Length = 545
Score = 106 bits (264), Expect = 5e-21
Identities = 55/106 (51%), Positives = 65/106 (61%)
Frame = +3
Query: 3 HYACMVDMLGRAGELTEACDLIAEMPMEPDAFVWGALLAASRSHSNIEXXXXXXXXXXXX 182
HYACMVD+LGRAG+L+EA DLI MP+EPD FVWGALL A R+H NIE
Sbjct: 438 HYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFEL 497
Query: 183 EPDSAGSCLLLSNALADAGRRRDAVQVXXXXXXXXXXXXXXXSWLE 320
EP+S GS LLLSN ADAGR +A ++ SW+E
Sbjct: 498 EPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 543
>emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 106 bits (264), Expect = 5e-21
Identities = 55/106 (51%), Positives = 65/106 (61%)
Frame = +3
Query: 3 HYACMVDMLGRAGELTEACDLIAEMPMEPDAFVWGALLAASRSHSNIEXXXXXXXXXXXX 182
HYACMVD+LGRAG+L+EA DLI MP+EPD FVWGALL A R+H NIE
Sbjct: 1214 HYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFEL 1273
Query: 183 EPDSAGSCLLLSNALADAGRRRDAVQVXXXXXXXXXXXXXXXSWLE 320
EP+S GS LLLSN ADAGR +A ++ SW+E
Sbjct: 1274 EPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 1319
Score = 72.0 bits (175), Expect = 1e-10
Identities = 40/107 (37%), Positives = 54/107 (50%)
Frame = +3
Query: 3 HYACMVDMLGRAGELTEACDLIAEMPMEPDAFVWGALLAASRSHSNIEXXXXXXXXXXXX 182
H +CMVD+LGRAG+L A D I ++ M+P A +W LLAA R +SN++
Sbjct: 556 HCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKILDL 615
Query: 183 EPDSAGSCLLLSNALADAGRRRDAVQVXXXXXXXXXXXXXXXSWLEV 323
EP+ A + LSN A+ GR DA SW+EV
Sbjct: 616 EPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWIEV 662
>gb|EEE58776.1| hypothetical protein OsJ_10296 [Oryza sativa Japonica Group]
Length = 419
Score = 104 bits (260), Expect = 1e-20
Identities = 53/108 (49%), Positives = 64/108 (59%)
Frame = +3
Query: 3 HYACMVDMLGRAGELTEACDLIAEMPMEPDAFVWGALLAASRSHSNIEXXXXXXXXXXXX 182
HYACMV +LGRAG L EA I MP+EPD FVWGALL A RSH NIE
Sbjct: 311 HYACMVHLLGRAGRLDEAYGFIRAMPLEPDRFVWGALLGACRSHGNIELAELAASRLLAV 370
Query: 183 EPDSAGSCLLLSNALADAGRRRDAVQVXXXXXXXXXXXXXXXSWLEVA 326
EPD+A SCLLLS+ALA+AG++ D ++ SW+E +
Sbjct: 371 EPDNAASCLLLSSALANAGKQDDVFKIKRLVKRRRLKKLDSYSWVETS 418
>gb|EEC74947.1| hypothetical protein OsI_10926 [Oryza sativa Indica Group]
Length = 469
Score = 104 bits (260), Expect = 1e-20
Identities = 53/108 (49%), Positives = 64/108 (59%)
Frame = +3
Query: 3 HYACMVDMLGRAGELTEACDLIAEMPMEPDAFVWGALLAASRSHSNIEXXXXXXXXXXXX 182
HYACMV +LGRAG L EA I MP+EPD FVWGALL A RSH NIE
Sbjct: 361 HYACMVHLLGRAGRLDEAYGFIRAMPLEPDRFVWGALLGACRSHGNIELAELAASRLLAV 420
Query: 183 EPDSAGSCLLLSNALADAGRRRDAVQVXXXXXXXXXXXXXXXSWLEVA 326
EPD+A SCLLLS+ALA+AG++ D ++ SW+E +
Sbjct: 421 EPDNAASCLLLSSALANAGKQDDVFKIKRLVKRRRLKKLDSYSWVETS 468
>ref|NP_001049690.1| Os03g0271300 [Oryza sativa Japonica Group]
gi|113548161|dbj|BAF11604.1| Os03g0271300, partial
[Oryza sativa Japonica Group]
Length = 484
Score = 104 bits (260), Expect = 1e-20
Identities = 53/108 (49%), Positives = 64/108 (59%)
Frame = +3
Query: 3 HYACMVDMLGRAGELTEACDLIAEMPMEPDAFVWGALLAASRSHSNIEXXXXXXXXXXXX 182
HYACMV +LGRAG L EA I MP+EPD FVWGALL A RSH NIE
Sbjct: 376 HYACMVHLLGRAGRLDEAYGFIRAMPLEPDRFVWGALLGACRSHGNIELAELAASRLLAV 435
Query: 183 EPDSAGSCLLLSNALADAGRRRDAVQVXXXXXXXXXXXXXXXSWLEVA 326
EPD+A SCLLLS+ALA+AG++ D ++ SW+E +
Sbjct: 436 EPDNAASCLLLSSALANAGKQDDVFKIKRLVKRRRLKKLDSYSWVETS 483
>gb|ABF95212.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 469
Score = 104 bits (260), Expect = 1e-20
Identities = 53/108 (49%), Positives = 64/108 (59%)
Frame = +3
Query: 3 HYACMVDMLGRAGELTEACDLIAEMPMEPDAFVWGALLAASRSHSNIEXXXXXXXXXXXX 182
HYACMV +LGRAG L EA I MP+EPD FVWGALL A RSH NIE
Sbjct: 361 HYACMVHLLGRAGRLDEAYGFIRAMPLEPDRFVWGALLGACRSHGNIELAELAASRLLAV 420
Query: 183 EPDSAGSCLLLSNALADAGRRRDAVQVXXXXXXXXXXXXXXXSWLEVA 326
EPD+A SCLLLS+ALA+AG++ D ++ SW+E +
Sbjct: 421 EPDNAASCLLLSSALANAGKQDDVFKIKRLVKRRRLKKLDSYSWVETS 468
>gb|AAP06869.1| chloroplast import-associated channel protein homolog [Oryza sativa
Japonica Group]
Length = 1273
Score = 104 bits (260), Expect = 1e-20
Identities = 53/108 (49%), Positives = 64/108 (59%)
Frame = +3
Query: 3 HYACMVDMLGRAGELTEACDLIAEMPMEPDAFVWGALLAASRSHSNIEXXXXXXXXXXXX 182
HYACMV +LGRAG L EA I MP+EPD FVWGALL A RSH NIE
Sbjct: 1165 HYACMVHLLGRAGRLDEAYGFIRAMPLEPDRFVWGALLGACRSHGNIELAELAASRLLAV 1224
Query: 183 EPDSAGSCLLLSNALADAGRRRDAVQVXXXXXXXXXXXXXXXSWLEVA 326
EPD+A SCLLLS+ALA+AG++ D ++ SW+E +
Sbjct: 1225 EPDNAASCLLLSSALANAGKQDDVFKIKRLVKRRRLKKLDSYSWVETS 1272
>gb|EMS66882.1| hypothetical protein TRIUR3_05694 [Triticum urartu]
Length = 563
Score = 104 bits (259), Expect = 2e-20
Identities = 52/108 (48%), Positives = 64/108 (59%)
Frame = +3
Query: 3 HYACMVDMLGRAGELTEACDLIAEMPMEPDAFVWGALLAASRSHSNIEXXXXXXXXXXXX 182
HYACMV +LGRAG L EA D I MP+EPD FVWGALL A RSH N+E
Sbjct: 456 HYACMVHLLGRAGRLVEAHDFIRAMPVEPDCFVWGALLGACRSHGNVELAELAASRVRTV 515
Query: 183 EPDSAGSCLLLSNALADAGRRRDAVQVXXXXXXXXXXXXXXXSWLEVA 326
EP++A S +LLS ALADAG++ D +++ SWLE +
Sbjct: 516 EPENAASYVLLSGALADAGKQNDVLKIKRLVKRRRLKKLDGCSWLETS 563
>ref|XP_004295975.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Fragaria vesca subsp. vesca]
Length = 532
Score = 103 bits (258), Expect = 2e-20
Identities = 55/108 (50%), Positives = 64/108 (59%)
Frame = +3
Query: 3 HYACMVDMLGRAGELTEACDLIAEMPMEPDAFVWGALLAASRSHSNIEXXXXXXXXXXXX 182
HYACMVD+LGRAG LTEA D+I MPMEPD FVWGALL ASR++ NIE
Sbjct: 425 HYACMVDLLGRAGNLTEAYDMIKAMPMEPDLFVWGALLGASRNYGNIELAEVAAKHLSEL 484
Query: 183 EPDSAGSCLLLSNALADAGRRRDAVQVXXXXXXXXXXXXXXXSWLEVA 326
EPDSAG+ LLLS+ ADAG + ++ SW E A
Sbjct: 485 EPDSAGNNLLLSSLYADAGNWINVARLKKMMKKKKLRKLPGCSWTEAA 532
>gb|EMT05023.1| hypothetical protein F775_06976 [Aegilops tauschii]
Length = 458
Score = 103 bits (257), Expect = 3e-20
Identities = 52/108 (48%), Positives = 63/108 (58%)
Frame = +3
Query: 3 HYACMVDMLGRAGELTEACDLIAEMPMEPDAFVWGALLAASRSHSNIEXXXXXXXXXXXX 182
HYACMV +LGRAG L EA D I MPMEPD FVWGALL A RSH N++
Sbjct: 351 HYACMVHLLGRAGRLVEAHDFIRAMPMEPDCFVWGALLGACRSHGNVKLAELAASRVRTV 410
Query: 183 EPDSAGSCLLLSNALADAGRRRDAVQVXXXXXXXXXXXXXXXSWLEVA 326
EP++A S +LLS ALADAG++ D ++ SWLE +
Sbjct: 411 EPENAASYVLLSGALADAGKQNDVFKIKRLVKRRRLKRLDGCSWLETS 458
>ref|XP_006649833.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Oryza brachyantha]
Length = 486
Score = 102 bits (255), Expect = 5e-20
Identities = 52/108 (48%), Positives = 64/108 (59%)
Frame = +3
Query: 3 HYACMVDMLGRAGELTEACDLIAEMPMEPDAFVWGALLAASRSHSNIEXXXXXXXXXXXX 182
HYACMV +LGRAG L EA D I MP++PD FVWGALL A RSH N+E
Sbjct: 378 HYACMVHLLGRAGRLDEAYDFIEAMPLDPDRFVWGALLGACRSHGNVELAELAASRLLAV 437
Query: 183 EPDSAGSCLLLSNALADAGRRRDAVQVXXXXXXXXXXXXXXXSWLEVA 326
EPD+A S LLLS+ALA+AG++ DA + SW+E +
Sbjct: 438 EPDNAASYLLLSSALANAGKQDDAFMIKKLVKRRRLKKLDSCSWVETS 485
>ref|XP_004987068.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Setaria italica]
Length = 469
Score = 99.8 bits (247), Expect = 5e-19
Identities = 50/106 (47%), Positives = 62/106 (58%)
Frame = +3
Query: 3 HYACMVDMLGRAGELTEACDLIAEMPMEPDAFVWGALLAASRSHSNIEXXXXXXXXXXXX 182
HYACMV +LGRAG+L EA D I MP+EPD FVWGALL A RSH +++
Sbjct: 362 HYACMVHLLGRAGKLAEAYDFIKAMPLEPDCFVWGALLGACRSHGDVKLAELAASRLLTV 421
Query: 183 EPDSAGSCLLLSNALADAGRRRDAVQVXXXXXXXXXXXXXXXSWLE 320
EP +A +CLL S+ALA AGR+ D ++ SWLE
Sbjct: 422 EPANAANCLLYSDALASAGRQDDVLKTKRLAKRRRMKKLDGCSWLE 467
>gb|EMJ09784.1| hypothetical protein PRUPE_ppa023060mg [Prunus persica]
Length = 428
Score = 98.2 bits (243), Expect = 1e-18
Identities = 50/108 (46%), Positives = 65/108 (60%)
Frame = +3
Query: 3 HYACMVDMLGRAGELTEACDLIAEMPMEPDAFVWGALLAASRSHSNIEXXXXXXXXXXXX 182
H+ACMVD+LGRAG+LTEA D+I MPMEPD FVWGALL A R++ NI+
Sbjct: 321 HFACMVDLLGRAGKLTEAYDMIKAMPMEPDLFVWGALLGACRNYGNIDLAEVAAKHLSEL 380
Query: 183 EPDSAGSCLLLSNALADAGRRRDAVQVXXXXXXXXXXXXXXXSWLEVA 326
EP+SAG+ LLLS+ AD+G + ++ SW+E A
Sbjct: 381 EPESAGNNLLLSSLYADSGSWGNVARLKKMMMKNKLRKLPGRSWMEAA 428
>ref|XP_003561784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Brachypodium distachyon]
Length = 466
Score = 97.1 bits (240), Expect = 3e-18
Identities = 51/108 (47%), Positives = 60/108 (55%)
Frame = +3
Query: 3 HYACMVDMLGRAGELTEACDLIAEMPMEPDAFVWGALLAASRSHSNIEXXXXXXXXXXXX 182
HYACMV +LGRAG L EA I MP+EPD FVWGALL A RSH N+E
Sbjct: 359 HYACMVHLLGRAGRLAEAHVFIKAMPVEPDRFVWGALLGACRSHGNVELAEMAASRLLTV 418
Query: 183 EPDSAGSCLLLSNALADAGRRRDAVQVXXXXXXXXXXXXXXXSWLEVA 326
EP +A S LLLS ALA AG++ D ++ SWLE +
Sbjct: 419 EPGNAASYLLLSGALASAGKQTDVFKIKRLVKRRRLKRLDGCSWLETS 466
>gb|EXC10706.1| hypothetical protein L484_025290 [Morus notabilis]
Length = 544
Score = 96.3 bits (238), Expect = 5e-18
Identities = 48/106 (45%), Positives = 62/106 (58%)
Frame = +3
Query: 3 HYACMVDMLGRAGELTEACDLIAEMPMEPDAFVWGALLAASRSHSNIEXXXXXXXXXXXX 182
HYAC++D+LGRAG+L EA D+I MP+EPD FVWGALL A R+H NI+
Sbjct: 437 HYACLIDLLGRAGKLNEAYDMIKAMPIEPDLFVWGALLGACRNHGNIDIAEIAARHLSEL 496
Query: 183 EPDSAGSCLLLSNALADAGRRRDAVQVXXXXXXXXXXXXXXXSWLE 320
EP+SAG+ LLLS ADAG + ++ SW+E
Sbjct: 497 EPESAGNKLLLSGLYADAGSWGNVARLKKTTFRKRLRKFQGCSWIE 542
>ref|XP_006358719.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Solanum tuberosum]
Length = 527
Score = 95.5 bits (236), Expect = 9e-18
Identities = 50/108 (46%), Positives = 63/108 (58%)
Frame = +3
Query: 3 HYACMVDMLGRAGELTEACDLIAEMPMEPDAFVWGALLAASRSHSNIEXXXXXXXXXXXX 182
H+ACMVD+LGRAG+L EA DLI M +EPD FVWGALL A R H N++
Sbjct: 420 HFACMVDLLGRAGKLDEAYDLIQTMSIEPDLFVWGALLGACRQHGNMDLAAVAAEKLAKL 479
Query: 183 EPDSAGSCLLLSNALADAGRRRDAVQVXXXXXXXXXXXXXXXSWLEVA 326
EP+SAGS +LLS+ ADA + + +V SW+EVA
Sbjct: 480 EPESAGSSVLLSSLYADANKWVNVAKVKRVIKKKKLKKVPGCSWVEVA 527
>ref|XP_002319471.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222857847|gb|EEE95394.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 703
Score = 95.1 bits (235), Expect = 1e-17
Identities = 48/107 (44%), Positives = 61/107 (57%)
Frame = +3
Query: 3 HYACMVDMLGRAGELTEACDLIAEMPMEPDAFVWGALLAASRSHSNIEXXXXXXXXXXXX 182
HYACMVD+LGRAG+L EA +LI MP+E DA VWGALL+A R+H N++
Sbjct: 469 HYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQL 528
Query: 183 EPDSAGSCLLLSNALADAGRRRDAVQVXXXXXXXXXXXXXXXSWLEV 323
EP SAG +LLSN A R +D ++ SW+EV
Sbjct: 529 EPSSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEV 575
>dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 94.7 bits (234), Expect = 1e-17
Identities = 48/107 (44%), Positives = 62/107 (57%)
Frame = +3
Query: 3 HYACMVDMLGRAGELTEACDLIAEMPMEPDAFVWGALLAASRSHSNIEXXXXXXXXXXXX 182
HY CM+D+LGRAG L EA DL+ +MP EPD+ +WGALL ASR H N E
Sbjct: 522 HYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFEL 581
Query: 183 EPDSAGSCLLLSNALADAGRRRDAVQVXXXXXXXXXXXXXXXSWLEV 323
EP++AG +LLSN A +G+ RDA ++ SW+EV
Sbjct: 582 EPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEV 628
>ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa
Japonica Group]
Length = 739
Score = 94.7 bits (234), Expect = 1e-17
Identities = 48/107 (44%), Positives = 62/107 (57%)
Frame = +3
Query: 3 HYACMVDMLGRAGELTEACDLIAEMPMEPDAFVWGALLAASRSHSNIEXXXXXXXXXXXX 182
HY CM+D+LGRAG L EA DL+ +MP EPD+ +WGALL ASR H N E
Sbjct: 522 HYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFEL 581
Query: 183 EPDSAGSCLLLSNALADAGRRRDAVQVXXXXXXXXXXXXXXXSWLEV 323
EP++AG +LLSN A +G+ RDA ++ SW+EV
Sbjct: 582 EPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEV 628