BLASTX nr result
ID: Zingiber25_contig00039451
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00039451
(309 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004512569.1| PREDICTED: pentatricopeptide repeat-containi... 128 7e-28
ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containi... 127 2e-27
gb|EMJ08058.1| hypothetical protein PRUPE_ppa027172mg [Prunus pe... 124 2e-26
ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containi... 124 2e-26
emb|CBI40853.3| unnamed protein product [Vitis vinifera] 124 2e-26
gb|ESW30343.1| hypothetical protein PHAVU_002G145200g [Phaseolus... 123 3e-26
ref|XP_004289518.1| PREDICTED: pentatricopeptide repeat-containi... 121 8e-26
gb|EXC35478.1| hypothetical protein L484_026785 [Morus notabilis] 118 7e-25
ref|NP_201360.1| pentatricopeptide repeat-containing protein [Ar... 116 3e-24
ref|XP_002864963.1| pentatricopeptide repeat-containing protein ... 116 3e-24
ref|XP_006394013.1| hypothetical protein EUTSA_v10003720mg [Eutr... 116 4e-24
ref|XP_006280086.1| hypothetical protein CARUB_v10025969mg [Caps... 115 6e-24
ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago t... 110 2e-22
ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago t... 110 2e-22
ref|XP_006342434.1| PREDICTED: pentatricopeptide repeat-containi... 108 6e-22
ref|XP_004253182.1| PREDICTED: pentatricopeptide repeat-containi... 108 6e-22
ref|XP_003590744.1| Pentatricopeptide repeat-containing protein ... 108 7e-22
ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containi... 107 2e-21
gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygr... 107 2e-21
ref|XP_002302000.2| pentatricopeptide repeat-containing family p... 105 5e-21
>ref|XP_004512569.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Cicer arietinum]
Length = 677
Score = 128 bits (322), Expect = 7e-28
Identities = 55/101 (54%), Positives = 80/101 (79%)
Frame = -1
Query: 303 SKRVARNILELDAGDNGTYILMSNIYASLGQWEEVMRMKSTIRRIKVKKDPAMSWIEVDR 124
++++ RNI+EL GD GT+IL++NIYAS G+W EV+ MKS +R +++KK PAMSW+++DR
Sbjct: 492 AEKIMRNIVELAPGDGGTHILLTNIYASAGKWNEVIEMKSALRDLRLKKSPAMSWVDIDR 551
Query: 123 EFHSFMAGDMDHPKAKEIYTELEKLITRTKELGYVPNTKYV 1
E H+FMAGD+ HP+A EI L +LI + K +GY P+TK+V
Sbjct: 552 EVHTFMAGDLSHPRAHEILEMLHELIEKVKTIGYNPDTKFV 592
>ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like isoform X1 [Glycine max]
Length = 676
Score = 127 bits (318), Expect = 2e-27
Identities = 56/101 (55%), Positives = 79/101 (78%)
Frame = -1
Query: 303 SKRVARNILELDAGDNGTYILMSNIYASLGQWEEVMRMKSTIRRIKVKKDPAMSWIEVDR 124
+++V ILEL GD GT+IL++N+YAS G+W +V+ MKSTIR +K+KK PAMSW++VDR
Sbjct: 491 AEKVMSKILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKLKKSPAMSWVDVDR 550
Query: 123 EFHSFMAGDMDHPKAKEIYTELEKLITRTKELGYVPNTKYV 1
E H+FMAGD+ HP++ EI+ L L+ + K LGY PNT++V
Sbjct: 551 EVHTFMAGDLSHPRSLEIFEMLHGLMKKVKTLGYNPNTRFV 591
>gb|EMJ08058.1| hypothetical protein PRUPE_ppa027172mg [Prunus persica]
Length = 650
Score = 124 bits (310), Expect = 2e-26
Identities = 54/101 (53%), Positives = 79/101 (78%)
Frame = -1
Query: 303 SKRVARNILELDAGDNGTYILMSNIYASLGQWEEVMRMKSTIRRIKVKKDPAMSWIEVDR 124
++R +LEL GD G++IL++N+YAS G W +V+ +KST+R +K KK+PAMSW++VDR
Sbjct: 465 AERAVNKVLELAPGDEGSHILLTNVYASTGNWSQVIGIKSTMRDLKFKKNPAMSWVDVDR 524
Query: 123 EFHSFMAGDMDHPKAKEIYTELEKLITRTKELGYVPNTKYV 1
E H+FMAGD+ H +++EI LEKLI + K LGYVP+T++V
Sbjct: 525 EVHTFMAGDLSHRRSREINETLEKLIEKVKLLGYVPDTRFV 565
>ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 124 bits (310), Expect = 2e-26
Identities = 52/101 (51%), Positives = 79/101 (78%)
Frame = -1
Query: 303 SKRVARNILELDAGDNGTYILMSNIYASLGQWEEVMRMKSTIRRIKVKKDPAMSWIEVDR 124
+KRV +++L D GT++L+SN+YAS G W +V+ MKS +R +++KK+PAMSW++V+R
Sbjct: 566 AKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVER 625
Query: 123 EFHSFMAGDMDHPKAKEIYTELEKLITRTKELGYVPNTKYV 1
E H+FMAGD HP ++I +LE+LI + KELGYVP+T++V
Sbjct: 626 EIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFV 666
>emb|CBI40853.3| unnamed protein product [Vitis vinifera]
Length = 749
Score = 124 bits (310), Expect = 2e-26
Identities = 52/101 (51%), Positives = 79/101 (78%)
Frame = -1
Query: 303 SKRVARNILELDAGDNGTYILMSNIYASLGQWEEVMRMKSTIRRIKVKKDPAMSWIEVDR 124
+KRV +++L D GT++L+SN+YAS G W +V+ MKS +R +++KK+PAMSW++V+R
Sbjct: 535 AKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVER 594
Query: 123 EFHSFMAGDMDHPKAKEIYTELEKLITRTKELGYVPNTKYV 1
E H+FMAGD HP ++I +LE+LI + KELGYVP+T++V
Sbjct: 595 EIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFV 635
>gb|ESW30343.1| hypothetical protein PHAVU_002G145200g [Phaseolus vulgaris]
Length = 676
Score = 123 bits (308), Expect = 3e-26
Identities = 55/101 (54%), Positives = 78/101 (77%)
Frame = -1
Query: 303 SKRVARNILELDAGDNGTYILMSNIYASLGQWEEVMRMKSTIRRIKVKKDPAMSWIEVDR 124
+++V R I EL D GT+IL++N+YAS G+W +V+ MKSTIR +K+KK PAMSW++VDR
Sbjct: 491 AEKVMRKIHELAPEDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKLKKSPAMSWVDVDR 550
Query: 123 EFHSFMAGDMDHPKAKEIYTELEKLITRTKELGYVPNTKYV 1
E H+FMAGD+ HP+A EI+ L L+ + K LGY P+T++V
Sbjct: 551 EVHTFMAGDLSHPRAHEIFEMLHGLMEKVKTLGYNPDTRFV 591
>ref|XP_004289518.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Fragaria vesca subsp. vesca]
Length = 719
Score = 121 bits (304), Expect = 8e-26
Identities = 53/101 (52%), Positives = 76/101 (75%)
Frame = -1
Query: 303 SKRVARNILELDAGDNGTYILMSNIYASLGQWEEVMRMKSTIRRIKVKKDPAMSWIEVDR 124
++R R +LE AGD G+ +L++N+YAS G W +V+ MKST+R ++ KK+PAMSW++VDR
Sbjct: 534 AERALRKVLEFSAGDGGSRVLLTNLYASTGNWNQVIDMKSTMREMQFKKNPAMSWVDVDR 593
Query: 123 EFHSFMAGDMDHPKAKEIYTELEKLITRTKELGYVPNTKYV 1
E H FMAGD+ HP++ EI LEKL + LGYVP+T++V
Sbjct: 594 EVHIFMAGDLSHPRSGEITETLEKLFEEVQILGYVPDTRFV 634
>gb|EXC35478.1| hypothetical protein L484_026785 [Morus notabilis]
Length = 728
Score = 118 bits (296), Expect = 7e-25
Identities = 51/101 (50%), Positives = 74/101 (73%)
Frame = -1
Query: 303 SKRVARNILELDAGDNGTYILMSNIYASLGQWEEVMRMKSTIRRIKVKKDPAMSWIEVDR 124
++R + +L D+ T++LMSN+YAS+G W +V+ MKST+R IK+KK PAMSW+E+D+
Sbjct: 543 AERALSRVRDLAPDDDATHVLMSNLYASIGNWNQVIEMKSTMREIKLKKIPAMSWVEIDK 602
Query: 123 EFHSFMAGDMDHPKAKEIYTELEKLITRTKELGYVPNTKYV 1
E H+FMAGD HP++ EI LE L + LGYVP+T++V
Sbjct: 603 EVHTFMAGDWSHPRSNEILETLEYLFEKVTSLGYVPDTRFV 643
>ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g65570 gi|8978285|dbj|BAA98176.1| unnamed protein
product [Arabidopsis thaliana]
gi|332010689|gb|AED98072.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 116 bits (291), Expect = 3e-24
Identities = 52/102 (50%), Positives = 79/102 (77%), Gaps = 1/102 (0%)
Frame = -1
Query: 303 SKRVARNILELDAGDNGTYILMSNIYASLGQWEEVMRMKSTIRRIKVKKDPAMSWIEVDR 124
++R+ R ILE++ GD GT ILMSN+YAS G+W V+ MKS ++ +K+KK+PAMSW+E+++
Sbjct: 554 AERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINK 613
Query: 123 EFHSFMAGDM-DHPKAKEIYTELEKLITRTKELGYVPNTKYV 1
E H+FMAGD+ HP +++I LE+LI ++K+LGYV + V
Sbjct: 614 ETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCV 655
>ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297310798|gb|EFH41222.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 720
Score = 116 bits (291), Expect = 3e-24
Identities = 52/102 (50%), Positives = 78/102 (76%), Gaps = 1/102 (0%)
Frame = -1
Query: 303 SKRVARNILELDAGDNGTYILMSNIYASLGQWEEVMRMKSTIRRIKVKKDPAMSWIEVDR 124
++R+ R ILE+ GD GT IL+SN+YAS G+W+ V+ MKS ++ +K+KK+PAMSW+E+D+
Sbjct: 536 AERITRKILEIAPGDEGTLILLSNLYASTGKWKRVIEMKSKMKEMKLKKNPAMSWVEIDK 595
Query: 123 EFHSFMAGDM-DHPKAKEIYTELEKLITRTKELGYVPNTKYV 1
E H+FMAGD+ HP +++I LE+LI + K+LGYV + V
Sbjct: 596 ETHTFMAGDLFSHPNSEQILENLEELIKKAKDLGYVEDKSCV 637
>ref|XP_006394013.1| hypothetical protein EUTSA_v10003720mg [Eutrema salsugineum]
gi|557090652|gb|ESQ31299.1| hypothetical protein
EUTSA_v10003720mg [Eutrema salsugineum]
Length = 720
Score = 116 bits (290), Expect = 4e-24
Identities = 54/102 (52%), Positives = 77/102 (75%), Gaps = 1/102 (0%)
Frame = -1
Query: 303 SKRVARNILELDAGDNGTYILMSNIYASLGQWEEVMRMKSTIRRIKVKKDPAMSWIEVDR 124
++R+ R ILE+ GD GT ILMSN+YA+ G+W +V+ MKS ++ +K+KK+PAMSW+EVDR
Sbjct: 536 AERIKRKILEIAPGDEGTLILMSNLYAATGKWNKVIEMKSEMKEMKLKKNPAMSWVEVDR 595
Query: 123 EFHSFMAGDM-DHPKAKEIYTELEKLITRTKELGYVPNTKYV 1
E H+FMAGD+ HP + +I LE+LI + K+LGYV + V
Sbjct: 596 ETHTFMAGDLFSHPNSGQILETLEELIKKAKDLGYVEDKSCV 637
>ref|XP_006280086.1| hypothetical protein CARUB_v10025969mg [Capsella rubella]
gi|482548790|gb|EOA12984.1| hypothetical protein
CARUB_v10025969mg [Capsella rubella]
Length = 720
Score = 115 bits (288), Expect = 6e-24
Identities = 54/102 (52%), Positives = 75/102 (73%), Gaps = 1/102 (0%)
Frame = -1
Query: 303 SKRVARNILELDAGDNGTYILMSNIYASLGQWEEVMRMKSTIRRIKVKKDPAMSWIEVDR 124
++ + R +LE+ GD GT ILMSN+YAS G+W +V+ MKS ++ +++KK+PAMSW+EVDR
Sbjct: 536 AEHITRKVLEIAPGDEGTLILMSNLYASTGKWNKVIEMKSVMKEMRLKKNPAMSWVEVDR 595
Query: 123 EFHSFMAGDMD-HPKAKEIYTELEKLITRTKELGYVPNTKYV 1
E H+FMAGD+ HP +KEI LE LI K+LGYV + V
Sbjct: 596 ETHTFMAGDLFLHPNSKEILETLEDLIRMAKDLGYVEDKSCV 637
>ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514334|gb|AES95957.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 676
Score = 110 bits (275), Expect = 2e-22
Identities = 49/101 (48%), Positives = 74/101 (73%)
Frame = -1
Query: 303 SKRVARNILELDAGDNGTYILMSNIYASLGQWEEVMRMKSTIRRIKVKKDPAMSWIEVDR 124
+++ + +L+ D GT+IL++NIYAS G+W+ V+ MKS R +++KK PAMSW+++DR
Sbjct: 491 AEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDR 550
Query: 123 EFHSFMAGDMDHPKAKEIYTELEKLITRTKELGYVPNTKYV 1
E H+FMAGD+ HP+A EI L +LI + LGY P+TK+V
Sbjct: 551 EVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFV 591
>ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|358344096|ref|XP_003636129.1| Pentatricopeptide
repeat protein [Medicago truncatula]
gi|355501824|gb|AES83027.1| Pentatricopeptide repeat
protein [Medicago truncatula]
gi|355502064|gb|AES83267.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 662
Score = 110 bits (275), Expect = 2e-22
Identities = 49/101 (48%), Positives = 74/101 (73%)
Frame = -1
Query: 303 SKRVARNILELDAGDNGTYILMSNIYASLGQWEEVMRMKSTIRRIKVKKDPAMSWIEVDR 124
+++ + +L+ D GT+IL++NIYAS G+W+ V+ MKS R +++KK PAMSW+++DR
Sbjct: 491 AEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDR 550
Query: 123 EFHSFMAGDMDHPKAKEIYTELEKLITRTKELGYVPNTKYV 1
E H+FMAGD+ HP+A EI L +LI + LGY P+TK+V
Sbjct: 551 EVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFV 591
>ref|XP_006342434.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like isoform X1 [Solanum tuberosum]
Length = 654
Score = 108 bits (271), Expect = 6e-22
Identities = 48/97 (49%), Positives = 72/97 (74%)
Frame = -1
Query: 291 ARNILELDAGDNGTYILMSNIYASLGQWEEVMRMKSTIRRIKVKKDPAMSWIEVDREFHS 112
A+ I++LD D GTYIL+SNIYA +WE+VM ++ +++ VKK+P SWIEV+++ H+
Sbjct: 474 AKQIIKLDPSDAGTYILLSNIYARTQKWEDVMDLRRSMKERGVKKEPGCSWIEVNKQIHA 533
Query: 111 FMAGDMDHPKAKEIYTELEKLITRTKELGYVPNTKYV 1
F+ GD HP+ +EI EL ++I R KE+GYVP+T +V
Sbjct: 534 FIMGDNSHPQKEEINKELNQIIWRLKEVGYVPDTNFV 570
>ref|XP_004253182.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Solanum lycopersicum]
Length = 654
Score = 108 bits (271), Expect = 6e-22
Identities = 48/97 (49%), Positives = 72/97 (74%)
Frame = -1
Query: 291 ARNILELDAGDNGTYILMSNIYASLGQWEEVMRMKSTIRRIKVKKDPAMSWIEVDREFHS 112
A+ I++LD D GTYIL+SNIYA +WE+VM ++ +++ VKK+P SWIEV+++ H+
Sbjct: 474 AKQIIKLDPSDAGTYILLSNIYARTQKWEDVMDLRRSMKERGVKKEPGCSWIEVNKQIHA 533
Query: 111 FMAGDMDHPKAKEIYTELEKLITRTKELGYVPNTKYV 1
F+ GD HP+ +EI EL ++I R KE+GYVP+T +V
Sbjct: 534 FIMGDNSHPQKEEINKELNQIIWRLKEVGYVPDTNFV 570
>ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 795
Score = 108 bits (270), Expect = 7e-22
Identities = 47/99 (47%), Positives = 71/99 (71%)
Frame = -1
Query: 297 RVARNILELDAGDNGTYILMSNIYASLGQWEEVMRMKSTIRRIKVKKDPAMSWIEVDREF 118
+ A +LEL G +GTYI++SN+YA+LGQW+EV R++ +R VKK+P SW+EV+
Sbjct: 613 QAADRLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMV 672
Query: 117 HSFMAGDMDHPKAKEIYTELEKLITRTKELGYVPNTKYV 1
H F+ D HP+ + +YT L++L+ K+LGYVP+TK+V
Sbjct: 673 HVFLVDDARHPEVQAVYTYLQQLVNEMKKLGYVPDTKFV 711
>ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 107 bits (267), Expect = 2e-21
Identities = 50/97 (51%), Positives = 68/97 (70%)
Frame = -1
Query: 291 ARNILELDAGDNGTYILMSNIYASLGQWEEVMRMKSTIRRIKVKKDPAMSWIEVDREFHS 112
A+ IL+LD D GTYIL+SNIYA+ +WE+V ++ +R VKKDP SWIEV ++ H+
Sbjct: 406 AKEILKLDPADAGTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHA 465
Query: 111 FMAGDMDHPKAKEIYTELEKLITRTKELGYVPNTKYV 1
F+ GD HP+ +EI EL +LI R LGYVP+T +V
Sbjct: 466 FILGDNSHPRIEEIKRELSQLIQRLMRLGYVPDTNFV 502
>gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 107 bits (267), Expect = 2e-21
Identities = 48/102 (47%), Positives = 70/102 (68%)
Frame = -1
Query: 306 RSKRVARNILELDAGDNGTYILMSNIYASLGQWEEVMRMKSTIRRIKVKKDPAMSWIEVD 127
R +R A N+L+LD D+G Y+ +SNIYA+ G++E+ +++ + + V K+P SWIEVD
Sbjct: 586 RGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVD 645
Query: 126 REFHSFMAGDMDHPKAKEIYTELEKLITRTKELGYVPNTKYV 1
+ H F D HP+AKEIY EL KL + KE GYVP+T++V
Sbjct: 646 GKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGYVPDTRFV 687
>ref|XP_002302000.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550344162|gb|EEE81273.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 797
Score = 105 bits (263), Expect = 5e-21
Identities = 44/97 (45%), Positives = 69/97 (71%)
Frame = -1
Query: 291 ARNILELDAGDNGTYILMSNIYASLGQWEEVMRMKSTIRRIKVKKDPAMSWIEVDREFHS 112
A + EL +GTY+L+SN+YA GQW ++ +++ +R VKK+P SWIEV+ + HS
Sbjct: 617 AERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHS 676
Query: 111 FMAGDMDHPKAKEIYTELEKLITRTKELGYVPNTKYV 1
F+ GD +HP+ ++IY LE+L+ +++GYVP+TKYV
Sbjct: 677 FLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDTKYV 713