BLASTX nr result
ID: Zingiber25_contig00039373
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00039373
(374 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003635560.1| PREDICTED: polyadenylate-binding protein 2-l... 148 8e-34
emb|CBI33270.3| unnamed protein product [Vitis vinifera] 148 8e-34
ref|XP_002531675.1| poly-A binding protein, putative [Ricinus co... 145 4e-33
ref|XP_006828070.1| hypothetical protein AMTR_s00008p00267630 [A... 145 7e-33
ref|XP_002306300.1| hypothetical protein POPTR_0005s07440g [Popu... 145 7e-33
gb|EMJ07057.1| hypothetical protein PRUPE_ppa011157mg [Prunus pe... 144 1e-32
ref|XP_006580259.1| PREDICTED: polyadenylate-binding protein 2 i... 144 2e-32
gb|ESW31711.1| hypothetical protein PHAVU_002G261500g [Phaseolus... 144 2e-32
gb|AHA84276.1| polyadenylate-binding protein 2 [Phaseolus vulgaris] 144 2e-32
gb|AGV54499.1| RNA binding/nucleic acid binding [Phaseolus vulga... 144 2e-32
ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2 i... 144 2e-32
gb|ACU19123.1| unknown [Glycine max] 144 2e-32
gb|ACJ84516.1| unknown [Medicago truncatula] gi|388501418|gb|AFK... 143 3e-32
ref|XP_006466250.1| PREDICTED: polyadenylate-binding protein 2-l... 142 5e-32
ref|XP_006426355.1| hypothetical protein CICLE_v100264481mg, par... 142 5e-32
ref|XP_006426354.1| hypothetical protein CICLE_v100264481mg, par... 142 5e-32
ref|XP_004504101.1| PREDICTED: polyadenylate-binding protein 2-A... 142 5e-32
gb|EPS60140.1| hypothetical protein M569_14665, partial [Genlise... 141 8e-32
ref|XP_006585263.1| PREDICTED: polyadenylate-binding protein 2-A... 140 1e-31
ref|XP_002866661.1| polyadenylate-binding protein family protein... 140 1e-31
>ref|XP_003635560.1| PREDICTED: polyadenylate-binding protein 2-like, partial [Vitis
vinifera]
Length = 130
Score = 148 bits (373), Expect = 8e-34
Identities = 70/87 (80%), Positives = 77/87 (88%)
Frame = +3
Query: 3 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEAFWLHESELHGRPIKVAAKRT 182
QQHFQSCGTVNRVTILTDK+GQPKGFAYVEFLEVEAVQEA L+ESELHGR +KV AKRT
Sbjct: 19 QQHFQSCGTVNRVTILTDKYGQPKGFAYVEFLEVEAVQEALLLNESELHGRQLKVLAKRT 78
Query: 183 NVPGLKQFRPLRHNPYPMYSYSRPHMP 263
NVPG+KQFRP R NPY Y + RP++P
Sbjct: 79 NVPGMKQFRPRRFNPYMGYRFRRPYVP 105
>emb|CBI33270.3| unnamed protein product [Vitis vinifera]
Length = 145
Score = 148 bits (373), Expect = 8e-34
Identities = 70/87 (80%), Positives = 77/87 (88%)
Frame = +3
Query: 3 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEAFWLHESELHGRPIKVAAKRT 182
QQHFQSCGTVNRVTILTDK+GQPKGFAYVEFLEVEAVQEA L+ESELHGR +KV AKRT
Sbjct: 34 QQHFQSCGTVNRVTILTDKYGQPKGFAYVEFLEVEAVQEALLLNESELHGRQLKVLAKRT 93
Query: 183 NVPGLKQFRPLRHNPYPMYSYSRPHMP 263
NVPG+KQFRP R NPY Y + RP++P
Sbjct: 94 NVPGMKQFRPRRFNPYMGYRFRRPYVP 120
>ref|XP_002531675.1| poly-A binding protein, putative [Ricinus communis]
gi|223528706|gb|EEF30719.1| poly-A binding protein,
putative [Ricinus communis]
Length = 218
Score = 145 bits (367), Expect = 4e-33
Identities = 68/87 (78%), Positives = 76/87 (87%)
Frame = +3
Query: 3 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEAFWLHESELHGRPIKVAAKRT 182
QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEA+QEA L+ESELHGR +KV KRT
Sbjct: 107 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAIQEALLLNESELHGRQLKVLPKRT 166
Query: 183 NVPGLKQFRPLRHNPYPMYSYSRPHMP 263
NVPG+KQ+RP R NPY Y + RP++P
Sbjct: 167 NVPGMKQYRPRRFNPYMGYRFRRPYVP 193
>ref|XP_006828070.1| hypothetical protein AMTR_s00008p00267630 [Amborella trichopoda]
gi|548832705|gb|ERM95486.1| hypothetical protein
AMTR_s00008p00267630 [Amborella trichopoda]
Length = 220
Score = 145 bits (365), Expect = 7e-33
Identities = 69/87 (79%), Positives = 75/87 (86%)
Frame = +3
Query: 3 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEAFWLHESELHGRPIKVAAKRT 182
QQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E+EAVQ A L+ESELHGR +KV AKRT
Sbjct: 109 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVELEAVQNALLLNESELHGRQLKVLAKRT 168
Query: 183 NVPGLKQFRPLRHNPYPMYSYSRPHMP 263
NVPG+KQFRP R NPY Y RP+MP
Sbjct: 169 NVPGMKQFRPRRFNPYLAYRSRRPYMP 195
>ref|XP_002306300.1| hypothetical protein POPTR_0005s07440g [Populus trichocarpa]
gi|222855749|gb|EEE93296.1| hypothetical protein
POPTR_0005s07440g [Populus trichocarpa]
Length = 218
Score = 145 bits (365), Expect = 7e-33
Identities = 69/87 (79%), Positives = 76/87 (87%)
Frame = +3
Query: 3 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEAFWLHESELHGRPIKVAAKRT 182
QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEA L+ESELHGR +KV+ KRT
Sbjct: 107 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEALALNESELHGRQLKVSPKRT 166
Query: 183 NVPGLKQFRPLRHNPYPMYSYSRPHMP 263
NVPG+KQ+RP R NPY Y + RP+ P
Sbjct: 167 NVPGMKQYRPRRINPYMGYRFRRPYAP 193
>gb|EMJ07057.1| hypothetical protein PRUPE_ppa011157mg [Prunus persica]
Length = 221
Score = 144 bits (363), Expect = 1e-32
Identities = 68/87 (78%), Positives = 75/87 (86%)
Frame = +3
Query: 3 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEAFWLHESELHGRPIKVAAKRT 182
QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLE EAVQEA L+ESELHGR +KV KRT
Sbjct: 110 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLETEAVQEALVLNESELHGRQLKVLPKRT 169
Query: 183 NVPGLKQFRPLRHNPYPMYSYSRPHMP 263
NVPG+KQ+RP R NPY Y + RP++P
Sbjct: 170 NVPGMKQYRPRRFNPYMGYRFRRPYVP 196
>ref|XP_006580259.1| PREDICTED: polyadenylate-binding protein 2 isoform X2 [Glycine max]
Length = 141
Score = 144 bits (362), Expect = 2e-32
Identities = 67/87 (77%), Positives = 74/87 (85%)
Frame = +3
Query: 3 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEAFWLHESELHGRPIKVAAKRT 182
QQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E EAVQEA L+ESELHGR +KV KRT
Sbjct: 30 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRT 89
Query: 183 NVPGLKQFRPLRHNPYPMYSYSRPHMP 263
NVPG+KQ+RP R NPY Y + RP+ P
Sbjct: 90 NVPGMKQYRPRRFNPYMAYGFRRPYTP 116
>gb|ESW31711.1| hypothetical protein PHAVU_002G261500g [Phaseolus vulgaris]
Length = 215
Score = 144 bits (362), Expect = 2e-32
Identities = 68/87 (78%), Positives = 74/87 (85%)
Frame = +3
Query: 3 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEAFWLHESELHGRPIKVAAKRT 182
QQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+EVEAVQEA L+ESELHGR +KV KRT
Sbjct: 104 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQEAILLNESELHGRQLKVLPKRT 163
Query: 183 NVPGLKQFRPLRHNPYPMYSYSRPHMP 263
NVPG+KQ RP R NPY Y + RP+ P
Sbjct: 164 NVPGMKQHRPRRFNPYMAYGFRRPYTP 190
>gb|AHA84276.1| polyadenylate-binding protein 2 [Phaseolus vulgaris]
Length = 211
Score = 144 bits (362), Expect = 2e-32
Identities = 68/87 (78%), Positives = 74/87 (85%)
Frame = +3
Query: 3 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEAFWLHESELHGRPIKVAAKRT 182
QQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+EVEAVQEA L+ESELHGR +KV KRT
Sbjct: 100 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQEAILLNESELHGRQLKVLPKRT 159
Query: 183 NVPGLKQFRPLRHNPYPMYSYSRPHMP 263
NVPG+KQ RP R NPY Y + RP+ P
Sbjct: 160 NVPGMKQHRPRRFNPYMXYGFRRPYTP 186
>gb|AGV54499.1| RNA binding/nucleic acid binding [Phaseolus vulgaris]
Length = 215
Score = 144 bits (362), Expect = 2e-32
Identities = 68/87 (78%), Positives = 74/87 (85%)
Frame = +3
Query: 3 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEAFWLHESELHGRPIKVAAKRT 182
QQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+EVEAVQEA L+ESELHGR +KV KRT
Sbjct: 104 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQEAILLNESELHGRQLKVLPKRT 163
Query: 183 NVPGLKQFRPLRHNPYPMYSYSRPHMP 263
NVPG+KQ RP R NPY Y + RP+ P
Sbjct: 164 NVPGMKQHRPRRFNPYMAYGFRRPYTP 190
>ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2 isoform X1 [Glycine max]
Length = 215
Score = 144 bits (362), Expect = 2e-32
Identities = 67/87 (77%), Positives = 74/87 (85%)
Frame = +3
Query: 3 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEAFWLHESELHGRPIKVAAKRT 182
QQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E EAVQEA L+ESELHGR +KV KRT
Sbjct: 104 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRT 163
Query: 183 NVPGLKQFRPLRHNPYPMYSYSRPHMP 263
NVPG+KQ+RP R NPY Y + RP+ P
Sbjct: 164 NVPGMKQYRPRRFNPYMAYGFRRPYTP 190
>gb|ACU19123.1| unknown [Glycine max]
Length = 205
Score = 144 bits (362), Expect = 2e-32
Identities = 67/87 (77%), Positives = 74/87 (85%)
Frame = +3
Query: 3 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEAFWLHESELHGRPIKVAAKRT 182
QQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E EAVQEA L+ESELHGR +KV KRT
Sbjct: 104 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRT 163
Query: 183 NVPGLKQFRPLRHNPYPMYSYSRPHMP 263
NVPG+KQ+RP R NPY Y + RP+ P
Sbjct: 164 NVPGMKQYRPRRFNPYMAYGFRRPYTP 190
>gb|ACJ84516.1| unknown [Medicago truncatula] gi|388501418|gb|AFK38775.1| unknown
[Medicago truncatula]
Length = 216
Score = 143 bits (360), Expect = 3e-32
Identities = 67/87 (77%), Positives = 73/87 (83%)
Frame = +3
Query: 3 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEAFWLHESELHGRPIKVAAKRT 182
QQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E EAVQEA L ESELHGR +KV KRT
Sbjct: 105 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVETEAVQEALLLSESELHGRQLKVLPKRT 164
Query: 183 NVPGLKQFRPLRHNPYPMYSYSRPHMP 263
NVPG+KQ+RP R NPY Y + RP+ P
Sbjct: 165 NVPGMKQYRPRRFNPYMAYGFRRPYAP 191
>ref|XP_006466250.1| PREDICTED: polyadenylate-binding protein 2-like [Citrus sinensis]
Length = 218
Score = 142 bits (358), Expect = 5e-32
Identities = 67/87 (77%), Positives = 75/87 (86%)
Frame = +3
Query: 3 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEAFWLHESELHGRPIKVAAKRT 182
QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLE++AVQEA L+ESELHGR +KV KRT
Sbjct: 107 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRT 166
Query: 183 NVPGLKQFRPLRHNPYPMYSYSRPHMP 263
NVPG+KQ+RP R NPY Y RP++P
Sbjct: 167 NVPGMKQYRPRRFNPYMGYRGRRPYVP 193
>ref|XP_006426355.1| hypothetical protein CICLE_v100264481mg, partial [Citrus
clementina] gi|557528345|gb|ESR39595.1| hypothetical
protein CICLE_v100264481mg, partial [Citrus clementina]
Length = 122
Score = 142 bits (358), Expect = 5e-32
Identities = 67/87 (77%), Positives = 75/87 (86%)
Frame = +3
Query: 3 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEAFWLHESELHGRPIKVAAKRT 182
QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLE++AVQEA L+ESELHGR +KV KRT
Sbjct: 11 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRT 70
Query: 183 NVPGLKQFRPLRHNPYPMYSYSRPHMP 263
NVPG+KQ+RP R NPY Y RP++P
Sbjct: 71 NVPGMKQYRPRRFNPYMGYRGRRPYVP 97
>ref|XP_006426354.1| hypothetical protein CICLE_v100264481mg, partial [Citrus
clementina] gi|557528344|gb|ESR39594.1| hypothetical
protein CICLE_v100264481mg, partial [Citrus clementina]
Length = 114
Score = 142 bits (358), Expect = 5e-32
Identities = 67/87 (77%), Positives = 75/87 (86%)
Frame = +3
Query: 3 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEAFWLHESELHGRPIKVAAKRT 182
QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLE++AVQEA L+ESELHGR +KV KRT
Sbjct: 11 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRT 70
Query: 183 NVPGLKQFRPLRHNPYPMYSYSRPHMP 263
NVPG+KQ+RP R NPY Y RP++P
Sbjct: 71 NVPGMKQYRPRRFNPYMGYRGRRPYVP 97
>ref|XP_004504101.1| PREDICTED: polyadenylate-binding protein 2-A-like [Cicer arietinum]
Length = 221
Score = 142 bits (358), Expect = 5e-32
Identities = 67/87 (77%), Positives = 73/87 (83%)
Frame = +3
Query: 3 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEAFWLHESELHGRPIKVAAKRT 182
QQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E EAVQEA L ESELHGR +KV KRT
Sbjct: 110 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVETEAVQEALLLTESELHGRQLKVLPKRT 169
Query: 183 NVPGLKQFRPLRHNPYPMYSYSRPHMP 263
NVPG+KQ+RP R NPY Y + RP+ P
Sbjct: 170 NVPGMKQYRPRRFNPYMAYGFRRPYPP 196
>gb|EPS60140.1| hypothetical protein M569_14665, partial [Genlisea aurea]
Length = 109
Score = 141 bits (356), Expect = 8e-32
Identities = 67/84 (79%), Positives = 72/84 (85%)
Frame = +3
Query: 3 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEAFWLHESELHGRPIKVAAKRT 182
QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLE EA+QEA L+ESELHGR +KV AKRT
Sbjct: 11 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAIQEALQLNESELHGRQLKVMAKRT 70
Query: 183 NVPGLKQFRPLRHNPYPMYSYSRP 254
NVPG+K FRP R NPY Y + RP
Sbjct: 71 NVPGMKLFRPRRFNPYIAYGFRRP 94
>ref|XP_006585263.1| PREDICTED: polyadenylate-binding protein 2-A [Glycine max]
Length = 218
Score = 140 bits (354), Expect = 1e-31
Identities = 66/87 (75%), Positives = 73/87 (83%)
Frame = +3
Query: 3 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEAFWLHESELHGRPIKVAAKRT 182
QQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E EAVQEA L+ESELHGR +KV KRT
Sbjct: 110 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRT 169
Query: 183 NVPGLKQFRPLRHNPYPMYSYSRPHMP 263
NVPG+KQ+RP NPY Y + RP+ P
Sbjct: 170 NVPGMKQYRPRCFNPYMAYGFRRPYTP 196
>ref|XP_002866661.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata] gi|297312496|gb|EFH42920.1|
polyadenylate-binding protein family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 220
Score = 140 bits (354), Expect = 1e-31
Identities = 68/87 (78%), Positives = 74/87 (85%)
Frame = +3
Query: 3 QQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEAFWLHESELHGRPIKVAAKRT 182
QQHFQ+CGTV+RVTILTDKFGQPKGFAYVEF+EVEAVQEA L+ESELHGR +KV KRT
Sbjct: 109 QQHFQTCGTVHRVTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVLQKRT 168
Query: 183 NVPGLKQFRPLRHNPYPMYSYSRPHMP 263
NVPGLKQFR R NPY Y + RP MP
Sbjct: 169 NVPGLKQFRGRRFNPYMGYRFRRPFMP 195