BLASTX nr result

ID: Zingiber25_contig00039304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00039304
         (250 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006362492.1| PREDICTED: regulator of nonsense transcripts...    62   6e-08
ref|XP_004244550.1| PREDICTED: regulator of nonsense transcripts...    62   6e-08
ref|XP_006358610.1| PREDICTED: regulator of nonsense transcripts...    59   7e-07
ref|XP_004245855.1| PREDICTED: regulator of nonsense transcripts...    57   3e-06
gb|EPS67765.1| hypothetical protein M569_07005, partial [Genlise...    55   1e-05

>ref|XP_006362492.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Solanum
           tuberosum]
          Length = 1264

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 29/39 (74%), Positives = 31/39 (79%)
 Frame = +3

Query: 18  NNLYETPSQPDTGGHAYTFLEFNPQDDFVDYMEFQELSQ 134
           NNLY+T SQPDTG  AYTFLEFN Q +  DY EFQELSQ
Sbjct: 6   NNLYDTASQPDTGNDAYTFLEFNTQGEEFDYPEFQELSQ 44


>ref|XP_004244550.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Solanum
           lycopersicum]
          Length = 1264

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 29/39 (74%), Positives = 31/39 (79%)
 Frame = +3

Query: 18  NNLYETPSQPDTGGHAYTFLEFNPQDDFVDYMEFQELSQ 134
           NNLY+T SQPDTG  AYTFLEFN Q +  DY EFQELSQ
Sbjct: 6   NNLYDTASQPDTGNDAYTFLEFNTQGEEFDYPEFQELSQ 44


>ref|XP_006358610.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Solanum
           tuberosum]
          Length = 1267

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 27/40 (67%), Positives = 31/40 (77%)
 Frame = +3

Query: 15  ANNLYETPSQPDTGGHAYTFLEFNPQDDFVDYMEFQELSQ 134
           +N+LY+T SQPDTG  AYTFLEFN Q +  DY EF ELSQ
Sbjct: 5   SNSLYDTASQPDTGNDAYTFLEFNTQGEEFDYPEFHELSQ 44


>ref|XP_004245855.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Solanum
           lycopersicum]
          Length = 1274

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/39 (66%), Positives = 29/39 (74%)
 Frame = +3

Query: 18  NNLYETPSQPDTGGHAYTFLEFNPQDDFVDYMEFQELSQ 134
           N+LY+T SQPDTG   YTFLEFN Q +  DY EF ELSQ
Sbjct: 6   NSLYDTASQPDTGNDVYTFLEFNTQGEEFDYPEFHELSQ 44


>gb|EPS67765.1| hypothetical protein M569_07005, partial [Genlisea aurea]
          Length = 1245

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/41 (70%), Positives = 33/41 (80%), Gaps = 2/41 (4%)
 Frame = +3

Query: 18  NNLYETPSQPDTGGHAYTFLEFNPQ--DDFVDYMEFQELSQ 134
           ++LYET SQPDTG  AYTF+EFN Q  +DF DY EFQELSQ
Sbjct: 18  SDLYETLSQPDTGNDAYTFIEFNTQGEEDF-DYPEFQELSQ 57


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