BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00039251
         (424 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006830249.1| hypothetical protein AMTR_s00130p00090930 [A...   114   1e-23
ref|XP_006849215.1| hypothetical protein AMTR_s00027p00227320 [A...   110   3e-22
ref|XP_006287361.1| hypothetical protein CARUB_v10000559mg [Caps...    87   2e-15
ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containi...    86   5e-15
gb|AEK82950.1| pentatricopeptide repeat superfamily protein [Cap...    86   5e-15
emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protei...    86   7e-15
ref|XP_006588532.1| PREDICTED: pentatricopeptide repeat-containi...    85   9e-15
ref|XP_002872129.1| predicted protein [Arabidopsis lyrata subsp....    85   9e-15
gb|ESW17910.1| hypothetical protein PHAVU_007G278500g [Phaseolus...    85   1e-14
gb|AFP20359.1| At1g03560-like protein, partial [Capsella grandif...    85   1e-14
gb|AEK82985.1| pentatricopeptide repeat superfamily protein [Cap...    85   1e-14
gb|AEK82984.1| pentatricopeptide repeat superfamily protein [Cap...    85   1e-14
gb|AEK82983.1| pentatricopeptide repeat superfamily protein [Cap...    85   1e-14
gb|AEK83516.1| pentatricopeptide repeat superfamily protein [Cap...    84   1e-14
gb|AEK83515.1| pentatricopeptide repeat superfamily protein [Cap...    84   1e-14
gb|AEK83514.1| pentatricopeptide repeat superfamily protein [Cap...    84   1e-14
gb|AEK83513.1| pentatricopeptide repeat superfamily protein [Cap...    84   1e-14
gb|ACN56986.1| At1g03560-like protein [Capsella rubella] gi|2245...    84   1e-14
gb|AFP20370.1| At1g03560-like protein, partial [Capsella grandif...    84   2e-14
gb|AFP20367.1| At1g03560-like protein, partial [Capsella grandif...    84   2e-14

>ref|XP_006830249.1| hypothetical protein AMTR_s00130p00090930 [Amborella trichopoda]
           gi|548836472|gb|ERM97665.1| hypothetical protein
           AMTR_s00130p00090930 [Amborella trichopoda]
          Length = 654

 Score =  114 bits (286), Expect = 1e-23
 Identities = 55/107 (51%), Positives = 72/107 (67%)
 Frame = +3

Query: 27  EMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSKAG 206
           EML RGY PD  +YTELIRGLC+ GK  EA ++  K+++  + +DHVP+HILI  Y K  
Sbjct: 542 EMLRRGYHPDAFTYTELIRGLCISGKTHEAHELLVKMKKMDVPLDHVPYHILITKYCKEK 601

Query: 207 MLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERM 347
            L  A DLYE+M+EKGL  +  TY++L + L K G+  EA QVY  M
Sbjct: 602 QLNIAFDLYEEMSEKGLRSKACTYHTLIVELTKKGHFKEALQVYHSM 648



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 35/113 (30%), Positives = 62/113 (54%)
 Frame = +3

Query: 9   ARKPIHEMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIK 188
           AR+   EML +G   D++SY  +I+G C+ G +  A + F ++ + GI  D V ++ LI 
Sbjct: 326 ARELWDEMLRKGILVDVVSYNVIIKGFCMGGDMSFAYKFFSEMFKKGISPDIVTYNTLIN 385

Query: 189 SYSKAGMLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERM 347
            + + G LVEA  ++ KM+  G++  + +Y  +   L   G +  A Q+  +M
Sbjct: 386 GHCREGKLVEAWIMHSKMSSNGVLPDHISYALVIQGLCLHGNVCRAHQLLHKM 438



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/107 (31%), Positives = 54/107 (50%)
 Frame = +3

Query: 27  EMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSKAG 206
           +M S G  PD ISY  +I+GLCL G +  A Q+  K+ +  I+ D   ++++I  Y + G
Sbjct: 402 KMSSNGVLPDHISYALVIQGLCLHGNVCRAHQLLHKMLDDSILPDPFVWNLIIDGYGRCG 461

Query: 207 MLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERM 347
            +    ++ + M    +     TYN+L     K GYL  A  + E M
Sbjct: 462 EIELVYEVRDHMLALSVAPNLFTYNALIHTHVKEGYLQGAFMLKEEM 508



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 36/141 (25%), Positives = 75/141 (53%), Gaps = 12/141 (8%)
 Frame = +3

Query: 9   ARKPIHEMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIK 188
           A K + ++L+     ++I+ T L+ G C +G + +A++++ ++   GI++D V ++++IK
Sbjct: 291 ANKLLAKILTEHEASNLITMTILMNGHCREGNMLKARELWDEMLRKGILVDVVSYNVIIK 350

Query: 189 SYSKAGMLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERMDK----- 353
            +   G +  A   + +M +KG+     TYN+L     + G L+EA  ++ +M       
Sbjct: 351 GFCMGGDMSFAYKFFSEMFKKGISPDIVTYNTLINGHCREGKLVEAWIMHSKMSSNGVLP 410

Query: 354 -------LLQHRCLYGQL*RA 395
                  ++Q  CL+G + RA
Sbjct: 411 DHISYALVIQGLCLHGNVCRA 431



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 35/117 (29%), Positives = 58/117 (49%)
 Frame = +3

Query: 9   ARKPIHEMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIK 188
           A K   EM  +G  PDI++Y  LI G C +GK+ EA  +  K+  +G++ DH+ + ++I+
Sbjct: 361 AYKFFSEMFKKGISPDIVTYNTLINGHCREGKLVEAWIMHSKMSSNGVLPDHISYALVIQ 420

Query: 189 SYSKAGMLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERMDKLL 359
                G +  A  L  KM +  ++     +N +     + G   E   VYE  D +L
Sbjct: 421 GLCLHGNVCRAHQLLHKMLDDSILPDPFVWNLIIDGYGRCG---EIELVYEVRDHML 474


>ref|XP_006849215.1| hypothetical protein AMTR_s00027p00227320 [Amborella trichopoda]
           gi|548852702|gb|ERN10796.1| hypothetical protein
           AMTR_s00027p00227320 [Amborella trichopoda]
          Length = 704

 Score =  110 bits (274), Expect = 3e-22
 Identities = 53/107 (49%), Positives = 70/107 (65%)
 Frame = +3

Query: 27  EMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSKAG 206
           EML +GY PD ++YTELIRGLC+ G+  EA ++  K+++  + +DHVP+HILI  Y K  
Sbjct: 592 EMLRKGYHPDTVTYTELIRGLCISGETHEAHELLVKMKKMDVPLDHVPYHILITKYCKEK 651

Query: 207 MLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERM 347
            L  A DLYE+M+EKGL  +  TY +L   L K G   EA QVY  M
Sbjct: 652 QLDIAFDLYEEMSEKGLRSKACTYRTLITELTKKGLFKEALQVYHSM 698



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/107 (29%), Positives = 57/107 (53%)
 Frame = +3

Query: 27  EMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSKAG 206
           EML +G   D++SY  +I G C+ G +  A + F ++ + GI  + V +  LI  + + G
Sbjct: 382 EMLRKGTLVDVVSYNVIINGFCMGGDMSFAYKFFSEMFKKGISPNIVTYSTLINGHCREG 441

Query: 207 MLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERM 347
            LVEA  ++ KM+  G++  + +Y  +   L   G +  A Q+  +M
Sbjct: 442 KLVEAWIMHSKMSSNGVLPDHISYALVIRGLCLHGNVCRAHQLLHKM 488



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 34/117 (29%), Positives = 59/117 (50%)
 Frame = +3

Query: 9   ARKPIHEMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIK 188
           A K   EM  +G  P+I++Y+ LI G C +GK+ EA  +  K+  +G++ DH+ + ++I+
Sbjct: 411 AYKFFSEMFKKGISPNIVTYSTLINGHCREGKLVEAWIMHSKMSSNGVLPDHISYALVIR 470

Query: 189 SYSKAGMLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERMDKLL 359
                G +  A  L  KM +  ++     +N +     + G   E   VYE  D +L
Sbjct: 471 GLCLHGNVCRAHQLLHKMLDDSILPDPFVWNLVIDGYGRCG---EIELVYEVTDHML 524



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/107 (31%), Positives = 53/107 (49%)
 Frame = +3

Query: 27  EMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSKAG 206
           +M S G  PD ISY  +IRGLCL G +  A Q+  K+ +  I+ D   ++++I  Y + G
Sbjct: 452 KMSSNGVLPDHISYALVIRGLCLHGNVCRAHQLLHKMLDDSILPDPFVWNLVIDGYGRCG 511

Query: 207 MLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERM 347
            +    ++ + M    +     TY +L  A  K G L  A  + E M
Sbjct: 512 EIELVYEVTDHMLALNVAPNIFTYKALIHAHVKEGNLQGAFMLKEEM 558


>ref|XP_006287361.1| hypothetical protein CARUB_v10000559mg [Capsella rubella]
           gi|482556067|gb|EOA20259.1| hypothetical protein
           CARUB_v10000559mg [Capsella rubella]
          Length = 582

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 44/84 (52%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
 Frame = +3

Query: 6   LARKPIHEMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILI 185
           LA +   EML RG QPDII+YTEL+RGLC KG+++EA+ +  ++QE+GI +DHVPF IL+
Sbjct: 493 LAFQLYDEMLKRGCQPDIITYTELVRGLCWKGRLKEAENLLSRMQETGIAMDHVPFLILV 552

Query: 186 KSYSKAGMLVEALDLYEK--MTEK 251
           K Y++     EA  +Y+K  MT K
Sbjct: 553 KKYTRLHRPEEANIVYKKWLMTRK 576



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/112 (29%), Positives = 55/112 (49%)
 Frame = +3

Query: 30  MLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSKAGM 209
           ML+ G  PD ISY  +I+GLC+KG ++ A   F  +  S ++ + + ++++I  Y + G 
Sbjct: 361 MLNVGVAPDQISYKVIIQGLCIKGDVERANNFFLSMLTSSLLPEALLWNVVIDGYGRCGD 420

Query: 210 LVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERMDKLLQH 365
              AL +   M   G+     T N+L     KG   ++A Q   +M     H
Sbjct: 421 TSSALSVLNLMLSYGIEPNIYTNNALIHGYVKGKRFIDAWQFKNQMRSTKVH 472


>ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Vitis vinifera]
          Length = 580

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 39/76 (51%), Positives = 53/76 (69%)
 Frame = +3

Query: 3   HLARKPIHEMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHIL 182
           H A +   EML RGY+PDII+YTELIRG C++G + EA+++  K+Q SG+ IDH PF IL
Sbjct: 501 HFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEELLAKLQRSGLSIDHAPFQIL 560

Query: 183 IKSYSKAGMLVEALDL 230
           I+ Y +  +   A DL
Sbjct: 561 IQKYCRTRVPGRAYDL 576



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 35/110 (31%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
 Frame = +3

Query: 21  IHEMLSR-GYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYS 197
           IH ++S+ G  PD+ISY  +I+GLC+ G +  A Q    + E+ +V + + ++++I  + 
Sbjct: 366 IHGVMSKMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHG 425

Query: 198 KAGMLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERM 347
           + G L  AL + ++M   G+     TYN+L  A  KGG +++A  + + M
Sbjct: 426 RHGDLSNALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEM 475



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/108 (29%), Positives = 59/108 (54%)
 Frame = +3

Query: 24  HEMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSKA 203
           ++M+ +G  PD++++  L+ GLC  G +++A  + +++ E G   +   F+  IK Y   
Sbjct: 155 NKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATFNTFIKGYCLN 214

Query: 204 GMLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERM 347
             + +AL L+  M   G+     TYN L  AL K G L +A ++ E++
Sbjct: 215 NNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKI 262


>gb|AEK82950.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 40/111 (36%), Positives = 70/111 (63%)
 Frame = +3

Query: 21  IHEMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSK 200
           +H M+  G++PD+++Y+ ++ GLC  G+++EA   F+  Q +G+ I+ + +  LI    K
Sbjct: 75  LHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGK 134

Query: 201 AGMLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERMDK 353
           AG + EA  L+E+M+EKG       YN+L  AL K G + EA  +++RM++
Sbjct: 135 AGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMMLFKRMEE 185


>emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 47/142 (33%), Positives = 77/142 (54%), Gaps = 12/142 (8%)
 Frame = +3

Query: 9   ARKPIHEMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIK 188
           A K   EM+ R   P+I++Y  LI G C+  ++ EAQQ+F  +     + D V ++ LIK
Sbjct: 345 AEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIK 404

Query: 189 SYSKAGMLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERM------- 347
            + KA  + E ++L+ +M+++GLVG   TYN+L   L + G    A +++++M       
Sbjct: 405 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 464

Query: 348 -----DKLLQHRCLYGQL*RAL 398
                  LL   C YG+L +AL
Sbjct: 465 DIITYSILLDGLCKYGKLEKAL 486



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 37/109 (33%), Positives = 59/109 (54%)
 Frame = +3

Query: 21  IHEMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSK 200
           I  M++RG QPD+ +Y  ++ GLC +G I  A  + KK+++  I  + V ++ +I    K
Sbjct: 209 IDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCK 268

Query: 201 AGMLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERM 347
              + +A DL+ KM  KG+     TYNSL   L   G   +AS++   M
Sbjct: 269 YKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDM 317



 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 41/132 (31%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
 Frame = +3

Query: 6   LARKPIHEMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILI 185
           +A+K   +M+S G  PDII+Y+ L+ GLC  GK+++A  VF+ +Q+S +  +   ++I+I
Sbjct: 449 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMI 508

Query: 186 KSYSKAGMLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERM--DKLL 359
           +   KAG + +  DL+  ++ KG+      Y ++     + G   EA  ++  M  D  L
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 568

Query: 360 QHRCLYGQL*RA 395
                Y  L RA
Sbjct: 569 PDSGCYNTLIRA 580



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 33/108 (30%), Positives = 62/108 (57%)
 Frame = +3

Query: 30  MLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSKAGM 209
           M+S+   PD+++Y  LI+G C   +++E  ++F+++ + G+V + V ++ LI+   +AG 
Sbjct: 387 MVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 446

Query: 210 LVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERMDK 353
              A  +++KM   G+     TY+ L   L K G L +A  V+E + K
Sbjct: 447 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 494



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 34/108 (31%), Positives = 60/108 (55%)
 Frame = +3

Query: 24  HEMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSKA 203
           ++M ++G +PD+ +Y  LI  LC  G+  +A ++   + E  I  + V F+ LI +++K 
Sbjct: 280 NKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKE 339

Query: 204 GMLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERM 347
           G L+EA  L+++M ++ +     TYNSL         L EA Q++  M
Sbjct: 340 GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 387


>ref|XP_006588532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16640,
           mitochondrial-like isoform X2 [Glycine max]
           gi|571481023|ref|XP_006588533.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g16640,
           mitochondrial-like isoform X3 [Glycine max]
           gi|571481025|ref|XP_006588534.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g16640,
           mitochondrial-like isoform X4 [Glycine max]
           gi|571481027|ref|XP_003537043.2| PREDICTED:
           pentatricopeptide repeat-containing protein At5g16640,
           mitochondrial-like isoform X1 [Glycine max]
           gi|571481029|ref|XP_006588535.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g16640,
           mitochondrial-like isoform X5 [Glycine max]
          Length = 578

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 48/113 (42%), Positives = 68/113 (60%)
 Frame = +3

Query: 9   ARKPIHEMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIK 188
           ARK  H M+ RG QPD I+YT L+ G CL  K+ EA+ +F  + E G+V D   ++ILIK
Sbjct: 302 ARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIK 361

Query: 189 SYSKAGMLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERM 347
            Y K   + EA++L E M  K LV    TYNS+   L K G +++A ++ + M
Sbjct: 362 GYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEM 414



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 40/113 (35%), Positives = 60/113 (53%)
 Frame = +3

Query: 9   ARKPIHEMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIK 188
           AR+  + M+ RG Q DII+Y  L+ G CL  K+ EA+++F  + E G   D + + IL+ 
Sbjct: 267 ARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMH 326

Query: 189 SYSKAGMLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERM 347
            Y     + EA +L+  M E+GLV    +YN L     K   + EA  + E M
Sbjct: 327 GYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDM 379


>ref|XP_002872129.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317966|gb|EFH48388.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 588

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 46/94 (48%), Positives = 63/94 (67%), Gaps = 2/94 (2%)
 Frame = +3

Query: 6   LARKPIHEMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILI 185
           LA +   EML RG QPDII+YTEL+RGLC KG+++EA+ +  ++Q SGI +DHVPF IL+
Sbjct: 491 LAFQLYDEMLKRGCQPDIITYTELVRGLCWKGRLKEAESLLSRMQVSGITMDHVPFLILV 550

Query: 186 KSYSKAGMLVEALDLYEK--MTEKGLVGRYSTYN 281
           K Y++     EA  +Y+K  +T  G V   S  N
Sbjct: 551 KKYTRLQRPDEAYLVYKKWLVTRNGGVSCPSILN 584


>gb|ESW17910.1| hypothetical protein PHAVU_007G278500g [Phaseolus vulgaris]
          Length = 581

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 51/126 (40%), Positives = 75/126 (59%)
 Frame = +3

Query: 9   ARKPIHEMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIK 188
           A++  H M+ RG QPDII+YT L+ G CL  K+ EA+++F+ +   G+V D   ++ILIK
Sbjct: 303 AKRLFHRMIERGEQPDIITYTILMHGYCLIDKVDEARKLFQGMIVRGLVPDVWSYNILIK 362

Query: 189 SYSKAGMLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERMDKLLQHR 368
            Y K   + EA++L + M  K LV    TYNSL   L K G +++A ++ + M     H 
Sbjct: 363 GYCKIERVDEAVNLLKHMFLKNLVPNIITYNSLVDGLCKSGEILDAWKLVDEM-----HY 417

Query: 369 CLYGQL 386
           C  GQL
Sbjct: 418 C--GQL 421


>gb|AFP20359.1| At1g03560-like protein, partial [Capsella grandiflora]
          Length = 212

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 39/111 (35%), Positives = 70/111 (63%)
 Frame = +3

Query: 21  IHEMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSK 200
           +H M+  G++PD+++Y+ ++ GLC  G+++EA   F+  + +G+ I+ + +  LI    K
Sbjct: 77  LHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSIFYSSLIDGLGK 136

Query: 201 AGMLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERMDK 353
           AG + EA  L+E+M+EKG       YN+L  AL K G + EA  +++RM++
Sbjct: 137 AGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 187


>gb|AEK82985.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
           gi|341605767|gb|AEK82986.1| pentatricopeptide repeat
           superfamily protein [Capsella grandiflora]
           gi|341605769|gb|AEK82987.1| pentatricopeptide repeat
           superfamily protein [Capsella grandiflora]
           gi|341605771|gb|AEK82988.1| pentatricopeptide repeat
           superfamily protein [Capsella grandiflora]
          Length = 208

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 39/111 (35%), Positives = 70/111 (63%)
 Frame = +3

Query: 21  IHEMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSK 200
           +H M+  G++PD+++Y+ ++ GLC  G+++EA   F+  + +G+ I+ + +  LI    K
Sbjct: 75  LHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSIFYSSLIDGLGK 134

Query: 201 AGMLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERMDK 353
           AG + EA  L+E+M+EKG       YN+L  AL K G + EA  +++RM++
Sbjct: 135 AGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 185


>gb|AEK82984.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 39/111 (35%), Positives = 70/111 (63%)
 Frame = +3

Query: 21  IHEMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSK 200
           +H M+  G++PD+++Y+ ++ GLC  G+++EA   F+  + +G+ I+ + +  LI    K
Sbjct: 75  LHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSIFYSSLIDGLGK 134

Query: 201 AGMLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERMDK 353
           AG + EA  L+E+M+EKG       YN+L  AL K G + EA  +++RM++
Sbjct: 135 AGRIDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAMTLFKRMEE 185


>gb|AEK82983.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 39/111 (35%), Positives = 70/111 (63%)
 Frame = +3

Query: 21  IHEMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSK 200
           +H M+  G++PD+++Y+ ++ GLC  G+++EA   F+  + +G+ I+ + +  LI    K
Sbjct: 75  LHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSIFYSSLIDGLGK 134

Query: 201 AGMLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERMDK 353
           AG + EA  L+E+M+EKG       YN+L  AL K G + EA  +++RM++
Sbjct: 135 AGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 185


>gb|AEK83516.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
          Length = 207

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 39/111 (35%), Positives = 70/111 (63%)
 Frame = +3

Query: 21  IHEMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSK 200
           +H M+  G++PD+++Y+ ++ GLC  G+++EA   F+  + +G+ I+ + +  LI    K
Sbjct: 72  LHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGK 131

Query: 201 AGMLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERMDK 353
           AG + EA  L+E+M+EKG       YN+L  AL K G + EA  +++RM++
Sbjct: 132 AGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVNEAMTLFKRMEE 182



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/108 (28%), Positives = 57/108 (52%)
 Frame = +3

Query: 30  MLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSKAGM 209
           M+ +G +P++  YT LI G    G +++A ++  ++ + G   D V + +++    K G 
Sbjct: 40  MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 99

Query: 210 LVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERMDK 353
           + EALD ++     GL      Y+SL   L K G + EA +++E M +
Sbjct: 100 VEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSE 147


>gb|AEK83515.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
          Length = 206

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 39/111 (35%), Positives = 70/111 (63%)
 Frame = +3

Query: 21  IHEMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSK 200
           +H M+  G++PD+++Y+ ++ GLC  G+++EA   F+  + +G+ I+ + +  LI    K
Sbjct: 71  LHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGK 130

Query: 201 AGMLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERMDK 353
           AG + EA  L+E+M+EKG       YN+L  AL K G + EA  +++RM++
Sbjct: 131 AGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVNEAMTLFKRMEE 181



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/108 (28%), Positives = 57/108 (52%)
 Frame = +3

Query: 30  MLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSKAGM 209
           M+ +G +P++  YT LI G    G +++A ++  ++ + G   D V + +++    K G 
Sbjct: 39  MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 98

Query: 210 LVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERMDK 353
           + EALD ++     GL      Y+SL   L K G + EA +++E M +
Sbjct: 99  VEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSE 146


>gb|AEK83514.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
          Length = 208

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 39/111 (35%), Positives = 70/111 (63%)
 Frame = +3

Query: 21  IHEMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSK 200
           +H M+  G++PD+++Y+ ++ GLC  G+++EA   F+  + +G+ I+ + +  LI    K
Sbjct: 72  LHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGK 131

Query: 201 AGMLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERMDK 353
           AG + EA  L+E+M+EKG       YN+L  AL K G + EA  +++RM++
Sbjct: 132 AGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVNEAMTLFKRMEE 182



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/108 (28%), Positives = 57/108 (52%)
 Frame = +3

Query: 30  MLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSKAGM 209
           M+ +G +P++  YT LI G    G +++A ++  ++ + G   D V + +++    K G 
Sbjct: 40  MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 99

Query: 210 LVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERMDK 353
           + EALD ++     GL      Y+SL   L K G + EA +++E M +
Sbjct: 100 VEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSE 147


>gb|AEK83513.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
          Length = 205

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 39/111 (35%), Positives = 70/111 (63%)
 Frame = +3

Query: 21  IHEMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSK 200
           +H M+  G++PD+++Y+ ++ GLC  G+++EA   F+  + +G+ I+ + +  LI    K
Sbjct: 72  LHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGK 131

Query: 201 AGMLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERMDK 353
           AG + EA  L+E+M+EKG       YN+L  AL K G + EA  +++RM++
Sbjct: 132 AGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVNEAMTLFKRMEE 182



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/108 (28%), Positives = 57/108 (52%)
 Frame = +3

Query: 30  MLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSKAGM 209
           M+ +G +P++  YT LI G    G +++A ++  ++ + G   D V + +++    K G 
Sbjct: 40  MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 99

Query: 210 LVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERMDK 353
           + EALD ++     GL      Y+SL   L K G + EA +++E M +
Sbjct: 100 VEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSE 147


>gb|ACN56986.1| At1g03560-like protein [Capsella rubella]
           gi|224576631|gb|ACN56989.1| At1g03560-like protein
           [Capsella rubella] gi|224576633|gb|ACN56990.1|
           At1g03560-like protein [Capsella rubella]
          Length = 196

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 39/111 (35%), Positives = 70/111 (63%)
 Frame = +3

Query: 21  IHEMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSK 200
           +H M+  G++PD+++Y+ ++ GLC  G+++EA   F+  + +G+ I+ + +  LI    K
Sbjct: 45  LHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGK 104

Query: 201 AGMLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERMDK 353
           AG + EA  L+E+M+EKG       YN+L  AL K G + EA  +++RM++
Sbjct: 105 AGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVNEAMTLFKRMEE 155



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/108 (28%), Positives = 57/108 (52%)
 Frame = +3

Query: 30  MLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSKAGM 209
           M+ +G +P++  YT LI G    G +++A ++  ++ + G   D V + +++    K G 
Sbjct: 13  MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 72

Query: 210 LVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERMDK 353
           + EALD ++     GL      Y+SL   L K G + EA +++E M +
Sbjct: 73  VEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSE 120


>gb|AFP20370.1| At1g03560-like protein, partial [Capsella grandiflora]
          Length = 212

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 39/111 (35%), Positives = 70/111 (63%)
 Frame = +3

Query: 21  IHEMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSK 200
           +H M+  G++PD+++Y+ ++ GLC  G+++EA   F+  + +G+ I+ + +  LI    K
Sbjct: 77  LHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGK 136

Query: 201 AGMLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERMDK 353
           AG + EA  L+E+M+EKG       YN+L  AL K G + EA  +++RM++
Sbjct: 137 AGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMALFKRMEE 187



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/108 (28%), Positives = 57/108 (52%)
 Frame = +3

Query: 30  MLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSKAGM 209
           M+ +G +P++  YT LI G    G +++A ++  ++ + G   D V + +++    K G 
Sbjct: 45  MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 104

Query: 210 LVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERMDK 353
           + EALD ++     GL      Y+SL   L K G + EA +++E M +
Sbjct: 105 VEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSE 152


>gb|AFP20367.1| At1g03560-like protein, partial [Capsella grandiflora]
          Length = 212

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 39/111 (35%), Positives = 70/111 (63%)
 Frame = +3

Query: 21  IHEMLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSK 200
           +H M+  G++PD+++Y+ ++ GLC  G+++EA   F+  + +G+ I+ + +  LI    K
Sbjct: 77  LHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGK 136

Query: 201 AGMLVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERMDK 353
           AG + EA  L+E+M+EKG       YN+L  AL K G + EA  +++RM++
Sbjct: 137 AGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEE 187



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/108 (28%), Positives = 57/108 (52%)
 Frame = +3

Query: 30  MLSRGYQPDIISYTELIRGLCLKGKIQEAQQVFKKVQESGIVIDHVPFHILIKSYSKAGM 209
           M+ +G +P++  YT LI G    G +++A ++  ++ + G   D V + +++    K G 
Sbjct: 45  MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 104

Query: 210 LVEALDLYEKMTEKGLVGRYSTYNSLFIALRKGGYLMEASQVYERMDK 353
           + EALD ++     GL      Y+SL   L K G + EA +++E M +
Sbjct: 105 VEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSE 152