BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00039192
         (392 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18084.3| unnamed protein product [Vitis vinifera]               83   3e-14
ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat...    83   3e-14
gb|EXB41949.1| hypothetical protein L484_002200 [Morus notabilis]      78   1e-12
ref|XP_004305093.1| PREDICTED: putative pentatricopeptide repeat...    76   5e-12
gb|EMJ08254.1| hypothetical protein PRUPE_ppb002198mg [Prunus pe...    75   7e-12
ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat...    75   9e-12
ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat...    75   9e-12
gb|EOY19146.1| Pentatricopeptide repeat (PPR) superfamily protei...    71   1e-10
ref|XP_002309169.1| pentatricopeptide repeat-containing family p...    67   2e-09
ref|XP_002323645.2| pentatricopeptide repeat-containing family p...    67   3e-09
ref|XP_003539649.2| PREDICTED: putative pentatricopeptide repeat...    65   9e-09
ref|XP_006469116.1| PREDICTED: uncharacterized protein LOC102612...    64   2e-08
ref|XP_002526706.1| pentatricopeptide repeat-containing protein,...    63   5e-08
gb|ESW05840.1| hypothetical protein PHAVU_011G213900g [Phaseolus...    62   8e-08
ref|XP_006429514.1| hypothetical protein CICLE_v10011209mg [Citr...    62   8e-08
ref|XP_004487107.1| PREDICTED: putative pentatricopeptide repeat...    62   8e-08
ref|XP_003519723.2| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
ref|XP_006827330.1| hypothetical protein AMTR_s00010p00267800 [A...    62   1e-07
gb|EPS63455.1| hypothetical protein M569_11327 [Genlisea aurea]        62   1e-07
ref|XP_002302824.2| hypothetical protein POPTR_0002s22590g [Popu...    61   1e-07

>emb|CBI18084.3| unnamed protein product [Vitis vinifera]
          Length = 496

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 47/105 (44%), Positives = 58/105 (55%)
 Frame = -2

Query: 319 KPIHAHAFRXXXXXXXXXXXXXXXSYFDVGQSSHALLLFRAAHQSDNIFLWNTVIRGLVS 140
           K +HAH  R                 FD   +++   LF    Q  NIFLWNT+IRGLVS
Sbjct: 31  KHLHAHLLRFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQP-NIFLWNTMIRGLVS 89

Query: 139 VQQMEDAVRSFTLMRLEGPSPDNFTVPLVLKACARLLHAGLGMQI 5
               +DA+  + LMR EG  P+NFT P VLKACARLL   LG++I
Sbjct: 90  NDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKI 134


>ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 47/105 (44%), Positives = 58/105 (55%)
 Frame = -2

Query: 319 KPIHAHAFRXXXXXXXXXXXXXXXSYFDVGQSSHALLLFRAAHQSDNIFLWNTVIRGLVS 140
           K +HAH  R                 FD   +++   LF    Q  NIFLWNT+IRGLVS
Sbjct: 31  KHLHAHLLRFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQP-NIFLWNTMIRGLVS 89

Query: 139 VQQMEDAVRSFTLMRLEGPSPDNFTVPLVLKACARLLHAGLGMQI 5
               +DA+  + LMR EG  P+NFT P VLKACARLL   LG++I
Sbjct: 90  NDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKI 134


>gb|EXB41949.1| hypothetical protein L484_002200 [Morus notabilis]
          Length = 688

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 45/105 (42%), Positives = 58/105 (55%)
 Frame = -2

Query: 319 KPIHAHAFRXXXXXXXXXXXXXXXSYFDVGQSSHALLLFRAAHQSDNIFLWNTVIRGLVS 140
           K +HA   R                 FD G +S+ LL+FR   Q  NI++WNTVIRGLVS
Sbjct: 33  KHVHASLLRLGLDQDNFLLNLFFRYAFDFGNTSYPLLVFRHTKQP-NIYVWNTVIRGLVS 91

Query: 139 VQQMEDAVRSFTLMRLEGPSPDNFTVPLVLKACARLLHAGLGMQI 5
               +DA+  +  MR +G  P+ FT P VLKACARL    LG++I
Sbjct: 92  SHCFDDAIDFYFSMRRQGFLPNGFTFPFVLKACARLSDFQLGLRI 136


>ref|XP_004305093.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Fragaria vesca subsp. vesca]
          Length = 688

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 38/79 (48%), Positives = 55/79 (69%)
 Frame = -2

Query: 241 FDVGQSSHALLLFRAAHQSDNIFLWNTVIRGLVSVQQMEDAVRSFTLMRLEGPSPDNFTV 62
           FD  Q+++ALL+F    +  N++L+NT+IRGLVS +  EDA+R +  MR EG  PD++T 
Sbjct: 59  FDFRQTNYALLVFHRTAEP-NVYLFNTIIRGLVSHECWEDAIRLYGSMRTEGLFPDSYTF 117

Query: 61  PLVLKACARLLHAGLGMQI 5
           P VLKACAR L   +G+ +
Sbjct: 118 PFVLKACARRLDLQIGLSV 136


>gb|EMJ08254.1| hypothetical protein PRUPE_ppb002198mg [Prunus persica]
          Length = 636

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 41/79 (51%), Positives = 51/79 (64%)
 Frame = -2

Query: 241 FDVGQSSHALLLFRAAHQSDNIFLWNTVIRGLVSVQQMEDAVRSFTLMRLEGPSPDNFTV 62
           FD G +S++ L+F    Q  NIFLWNT+IRGLVS    +DA+  F  MR EG  P++FT 
Sbjct: 7   FDFGHASYSRLVFDQTTQP-NIFLWNTMIRGLVSDDCFDDAIEFFISMRTEGILPNSFTF 65

Query: 61  PLVLKACARLLHAGLGMQI 5
           P VLKACAR     LG+ I
Sbjct: 66  PFVLKACARRSDFPLGLNI 84


>ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 43/105 (40%), Positives = 57/105 (54%)
 Frame = -2

Query: 319 KPIHAHAFRXXXXXXXXXXXXXXXSYFDVGQSSHALLLFRAAHQSDNIFLWNTVIRGLVS 140
           K IHA   R                  D G ++++ L+F    +  NIFLWNT+IRGLVS
Sbjct: 33  KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEP-NIFLWNTMIRGLVS 91

Query: 139 VQQMEDAVRSFTLMRLEGPSPDNFTVPLVLKACARLLHAGLGMQI 5
               +DA+  +  MR  G  P+NFT+P VLKACAR L   LG++I
Sbjct: 92  KDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKI 136


>ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 43/105 (40%), Positives = 57/105 (54%)
 Frame = -2

Query: 319 KPIHAHAFRXXXXXXXXXXXXXXXSYFDVGQSSHALLLFRAAHQSDNIFLWNTVIRGLVS 140
           K IHA   R                  D G ++++ L+F    +  NIFLWNT+IRGLVS
Sbjct: 33  KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEP-NIFLWNTMIRGLVS 91

Query: 139 VQQMEDAVRSFTLMRLEGPSPDNFTVPLVLKACARLLHAGLGMQI 5
               +DA+  +  MR  G  P+NFT+P VLKACAR L   LG++I
Sbjct: 92  KDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKI 136


>gb|EOY19146.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           isoform 1 [Theobroma cacao] gi|508727250|gb|EOY19147.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative isoform 1 [Theobroma cacao]
          Length = 688

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 42/105 (40%), Positives = 59/105 (56%)
 Frame = -2

Query: 319 KPIHAHAFRXXXXXXXXXXXXXXXSYFDVGQSSHALLLFRAAHQSDNIFLWNTVIRGLVS 140
           K +HA  FR               + F  GQ+++A L+F    Q  NI+LWNT+I+GLVS
Sbjct: 33  KQVHAALFRLGLHQHNYLLNIILKATFHFGQTNYACLIFNQTKQP-NIYLWNTMIQGLVS 91

Query: 139 VQQMEDAVRSFTLMRLEGPSPDNFTVPLVLKACARLLHAGLGMQI 5
                +A + +  MR +G  P++FT P VLKA ARLL   LG++I
Sbjct: 92  GDCFLEAAQFYASMRSQGFLPNSFTFPFVLKAYARLLDLQLGIRI 136


>ref|XP_002309169.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222855145|gb|EEE92692.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 619

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 37/105 (35%), Positives = 58/105 (55%)
 Frame = -2

Query: 319 KPIHAHAFRXXXXXXXXXXXXXXXSYFDVGQSSHALLLFRAAHQSDNIFLWNTVIRGLVS 140
           K +HA   R                 F+ G ++++  +F    +  NIFL+NT+I GLV 
Sbjct: 27  KHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEP-NIFLFNTMIHGLVL 85

Query: 139 VQQMEDAVRSFTLMRLEGPSPDNFTVPLVLKACARLLHAGLGMQI 5
               ++++  +  MR EG SPD+FT P +LKACARLL + LG+++
Sbjct: 86  NDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKL 130


>ref|XP_002323645.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550321449|gb|EEF05406.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 682

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
 Frame = -2

Query: 319 KPIHAHAFRXXXXXXXXXXXXXXXSYFDVGQSSHALLLFRAAHQSD--NIFLWNTVIRGL 146
           K IHA   R                 F+ G ++++   FR   Q+   NIFL+NT+IRGL
Sbjct: 27  KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYS---FRILDQTKEPNIFLFNTMIRGL 83

Query: 145 VSVQQMEDAVRSFTLMRLEGPSPDNFTVPLVLKACARLLHAGLGMQI 5
           V     ++++  +  MR EG SPD+FT P VLKACAR+L + LG+++
Sbjct: 84  VLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKM 130


>ref|XP_003539649.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like isoform X1 [Glycine max]
           gi|571494895|ref|XP_006592973.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At3g08820-like isoform X2 [Glycine max]
          Length = 681

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 34/63 (53%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
 Frame = -2

Query: 181 NIFLWNTVIRGLVSVQQMEDAVRSFTLMRLEGPSPDNFTVPLVLKACARL---LHAGLGM 11
           NIFL+NT+IRG+VS     DAV  +  MR  G +PDNFT P VLKAC RL    H GL +
Sbjct: 70  NIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSL 129

Query: 10  QIL 2
             L
Sbjct: 130 HSL 132


>ref|XP_006469116.1| PREDICTED: uncharacterized protein LOC102612526 [Citrus sinensis]
          Length = 1508

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 32/80 (40%), Positives = 46/80 (57%)
 Frame = -2

Query: 244 YFDVGQSSHALLLFRAAHQSDNIFLWNTVIRGLVSVQQMEDAVRSFTLMRLEGPSPDNFT 65
           Y  +G  SHA  LF +   S +IFLWN +IR  V  +Q + +++ +  MR    +PDNFT
Sbjct: 545 YASLGSISHAFSLFSSVSDSCDIFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDNFT 604

Query: 64  VPLVLKACARLLHAGLGMQI 5
            P VLKAC  L     G+++
Sbjct: 605 FPFVLKACGYLRDIEFGVKV 624


>ref|XP_002526706.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534006|gb|EEF35728.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 461

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 37/105 (35%), Positives = 55/105 (52%)
 Frame = -2

Query: 319 KPIHAHAFRXXXXXXXXXXXXXXXSYFDVGQSSHALLLFRAAHQSDNIFLWNTVIRGLVS 140
           K +HA   R               S FD   +++  L+F    + D + L+NT+IRGLVS
Sbjct: 33  KHVHAALLRLGFDQGSYLWSMIIRSSFDFNDTTYTRLIFNQIKEPD-VVLYNTMIRGLVS 91

Query: 139 VQQMEDAVRSFTLMRLEGPSPDNFTVPLVLKACARLLHAGLGMQI 5
                +++  +  MR +G  P+NFT P V+KACARLL   LG+ +
Sbjct: 92  SDCFTESIEFYYSMRKKGFLPNNFTFPFVIKACARLLDFQLGIMM 136


>gb|ESW05840.1| hypothetical protein PHAVU_011G213900g [Phaseolus vulgaris]
          Length = 690

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
 Frame = -2

Query: 226 SSHALLLFRAAHQSDNIFLWNTVIRGLVSVQQMEDAVRSFTLMRLEGP-SPDNFTVPLVL 50
           + +A ++F A   + NIFL+NT+IRGLVS +   +AV  +  MR     +PDNFT P VL
Sbjct: 65  TQYATVVF-AQTPNPNIFLYNTLIRGLVSNEAFHEAVSLYASMRQRSAFAPDNFTFPFVL 123

Query: 49  KACARLLHAGLGMQI 5
           KACARL +  +G+ I
Sbjct: 124 KACARLRNTHVGLTI 138


>ref|XP_006429514.1| hypothetical protein CICLE_v10011209mg [Citrus clementina]
           gi|568855070|ref|XP_006481133.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At3g08820-like [Citrus sinensis]
           gi|557531571|gb|ESR42754.1| hypothetical protein
           CICLE_v10011209mg [Citrus clementina]
          Length = 688

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 35/78 (44%), Positives = 47/78 (60%)
 Frame = -2

Query: 241 FDVGQSSHALLLFRAAHQSDNIFLWNTVIRGLVSVQQMEDAVRSFTLMRLEGPSPDNFTV 62
           F  GQ+++  L+F    +  NIFL+NT+IRG VS    + A+  +  MR EG  P NFT 
Sbjct: 59  FHFGQTNYTHLIFSQTKEP-NIFLYNTMIRGFVSNDCFQHAIEFYNSMRNEGFLPTNFTF 117

Query: 61  PLVLKACARLLHAGLGMQ 8
           P VLKACAR     LG++
Sbjct: 118 PFVLKACAREHDFQLGVR 135


>ref|XP_004487107.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like isoform X1 [Cicer arietinum]
           gi|502082246|ref|XP_004487108.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At3g08820-like isoform X2 [Cicer arietinum]
          Length = 668

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 33/77 (42%), Positives = 46/77 (59%)
 Frame = -2

Query: 235 VGQSSHALLLFRAAHQSDNIFLWNTVIRGLVSVQQMEDAVRSFTLMRLEGPSPDNFTVPL 56
           +  + ++ L+F       N FL+NT+IRG+VS  +  DAV+ ++ M      PDNFT P 
Sbjct: 51  LSNTQYSNLVFHKTPTYPNTFLYNTMIRGMVSNDRFHDAVQLYSSMHKASLIPDNFTFPF 110

Query: 55  VLKACARLLHAGLGMQI 5
           VLKACARL    LG+ I
Sbjct: 111 VLKACARLNLFQLGIAI 127


>ref|XP_003519723.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 754

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 33/77 (42%), Positives = 42/77 (54%)
 Frame = -2

Query: 244 YFDVGQSSHALLLFRAAHQSDNIFLWNTVIRGLVSVQQMEDAVRSFTLMRLEGPSPDNFT 65
           Y + G   HA L FRA      I  WN ++RGLV+V     A+  +  M   G +PDN+T
Sbjct: 104 YVNFGSLQHAFLTFRALPHKP-IIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYT 162

Query: 64  VPLVLKACARLLHAGLG 14
            PLVLKAC+ L    LG
Sbjct: 163 YPLVLKACSSLHALQLG 179


>ref|XP_006827330.1| hypothetical protein AMTR_s00010p00267800 [Amborella trichopoda]
           gi|548831759|gb|ERM94567.1| hypothetical protein
           AMTR_s00010p00267800 [Amborella trichopoda]
          Length = 659

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
 Frame = -2

Query: 319 KPIHAHAFRXXXXXXXXXXXXXXXSYFDV---GQSSHALLLFRAAHQSDNIFLWNTVIRG 149
           K IHA  FR                +  V   G  SHA L+F    Q+ N+F WNT+IRG
Sbjct: 26  KQIHAFVFRRPVLLRSNLVLAKMLRFAAVSPSGNLSHARLMFEFIGQAPNLFFWNTIIRG 85

Query: 148 LVSVQQMEDAVRSFTLMRLEGPSPDNFTVPLVLKACAR 35
                  ++ +  F LMR    +PD FT   ++KAC+R
Sbjct: 86  YAKSTTPQETIMLFRLMRRRSVAPDGFTFNFLIKACSR 123


>gb|EPS63455.1| hypothetical protein M569_11327 [Genlisea aurea]
          Length = 685

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 28/59 (47%), Positives = 41/59 (69%)
 Frame = -2

Query: 181 NIFLWNTVIRGLVSVQQMEDAVRSFTLMRLEGPSPDNFTVPLVLKACARLLHAGLGMQI 5
           N +L+NT+IRGLVS      A+  F +MR +G  P+NFT P VLK+C+R +  GLG+++
Sbjct: 74  NFYLYNTMIRGLVSNDCFSQAIEYFYMMRKQGFLPNNFTFPFVLKSCSRRMDLGLGVKV 132


>ref|XP_002302824.2| hypothetical protein POPTR_0002s22590g [Populus trichocarpa]
           gi|550345610|gb|EEE82097.2| hypothetical protein
           POPTR_0002s22590g [Populus trichocarpa]
          Length = 647

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 32/80 (40%), Positives = 45/80 (56%)
 Frame = -2

Query: 244 YFDVGQSSHALLLFRAAHQSDNIFLWNTVIRGLVSVQQMEDAVRSFTLMRLEGPSPDNFT 65
           Y  +G  S+A  LF +   +D +FLWN +IRGLV       A+  +  M   G  PDNFT
Sbjct: 20  YASLGSVSYAYSLFSSTPSAD-LFLWNVMIRGLVDNSHYHHAILLYKQMLRLGIQPDNFT 78

Query: 64  VPLVLKACARLLHAGLGMQI 5
            P ++KAC+ L H   G++I
Sbjct: 79  FPFIIKACSCLRHFEFGIRI 98