BLASTX nr result
ID: Zingiber25_contig00039009
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00039009
(402 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX91054.1| Tetratricopeptide repeat (TPR)-like superfamily p... 129 3e-28
ref|NP_201453.1| pentatricopeptide repeat-containing protein [Ar... 129 4e-28
ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containi... 129 5e-28
dbj|BAF01120.1| hypothetical protein [Arabidopsis thaliana] 129 5e-28
ref|NP_175445.1| pentatricopeptide repeat-containing protein [Ar... 129 5e-28
gb|EMJ27978.1| hypothetical protein PRUPE_ppa018015mg [Prunus pe... 127 1e-27
gb|EMJ00949.1| hypothetical protein PRUPE_ppa002774mg [Prunus pe... 127 2e-27
ref|XP_006344853.1| PREDICTED: pentatricopeptide repeat-containi... 127 2e-27
ref|XP_006393847.1| hypothetical protein EUTSA_v10005524mg [Eutr... 127 2e-27
ref|XP_004292199.1| PREDICTED: pentatricopeptide repeat-containi... 127 2e-27
ref|XP_004231299.1| PREDICTED: pentatricopeptide repeat-containi... 127 2e-27
ref|XP_006281646.1| hypothetical protein CARUB_v10027776mg [Caps... 126 3e-27
ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp.... 126 3e-27
gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum] 126 3e-27
ref|XP_006382794.1| hypothetical protein POPTR_0005s05510g [Popu... 125 4e-27
ref|XP_002328495.1| predicted protein [Populus trichocarpa] 125 4e-27
ref|XP_002866756.1| pentatricopeptide repeat-containing protein ... 125 6e-27
gb|EXC24155.1| hypothetical protein L484_015170 [Morus notabilis] 124 1e-26
gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsu... 124 1e-26
ref|XP_006305855.1| hypothetical protein CARUB_v10010934mg [Caps... 124 1e-26
>gb|EOX91054.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 529
Score = 129 bits (325), Expect = 3e-28
Identities = 63/132 (47%), Positives = 89/132 (67%)
Frame = +2
Query: 2 IVSILPAITELGALSHGRSIHACLYKMDIEIDSVLGSALVDMYSNCGCLEEALVVFKNLN 181
+ S L A + LGAL GR IHA + ++ +EID +LG L+DM++ CG +EEAL VF+ +
Sbjct: 253 LASTLSACSHLGALDQGRWIHAYIDRIGVEIDPILGCVLIDMFAKCGDMEEALEVFRKVK 312
Query: 182 HKELSAWNSVISGLAAHGRGADALRVFYTMQNDFEMLPNEITFTAVLTACRHTGLTEEGR 361
KE+S W +VISG A HGRG +AL V++ + + PN ITFTA+LTAC H+GL EEG+
Sbjct: 313 KKEVSLWTAVISGFAIHGRGKEAL-VWFDIMQKVGIRPNHITFTAILTACSHSGLVEEGK 371
Query: 362 RMFSLFTEHYKL 397
++ +KL
Sbjct: 372 SLYKSMDRVHKL 383
Score = 60.1 bits (144), Expect = 3e-07
Identities = 30/97 (30%), Positives = 55/97 (56%)
Frame = +2
Query: 71 LYKMDIEIDSVLGSALVDMYSNCGCLEEALVVFKNLNHKELSAWNSVISGLAAHGRGADA 250
L+ + E D V ++++ Y+ CG +E A FK++ K + +W ++ISG G +A
Sbjct: 175 LFDLVPERDIVSWNSMIGCYTKCGKMEIAYEFFKDMPTKNVISWTTMISGYVGAGMYKEA 234
Query: 251 LRVFYTMQNDFEMLPNEITFTAVLTACRHTGLTEEGR 361
L +F+ MQ + + P+ + + L+AC H G ++GR
Sbjct: 235 LNLFHEMQIE-GVKPDNVALASTLSACSHLGALDQGR 270
>ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g66520 gi|10177533|dbj|BAB10928.1| selenium-binding
protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 129 bits (324), Expect = 4e-28
Identities = 67/133 (50%), Positives = 86/133 (64%)
Frame = +2
Query: 2 IVSILPAITELGALSHGRSIHACLYKMDIEIDSVLGSALVDMYSNCGCLEEALVVFKNLN 181
+ + L A +LGAL G+ IH+ L K I +DSVLG L+DMY+ CG +EEAL VFKN+
Sbjct: 250 LANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK 309
Query: 182 HKELSAWNSVISGLAAHGRGADALRVFYTMQNDFEMLPNEITFTAVLTACRHTGLTEEGR 361
K + AW ++ISG A HG G +A+ F MQ + PN ITFTAVLTAC +TGL EEG+
Sbjct: 310 KKSVQAWTALISGYAYHGHGREAISKFMEMQK-MGIKPNVITFTAVLTACSYTGLVEEGK 368
Query: 362 RMFSLFTEHYKLK 400
+F Y LK
Sbjct: 369 LIFYSMERDYNLK 381
>ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Vitis vinifera]
Length = 654
Score = 129 bits (323), Expect = 5e-28
Identities = 57/133 (42%), Positives = 92/133 (69%)
Frame = +2
Query: 2 IVSILPAITELGALSHGRSIHACLYKMDIEIDSVLGSALVDMYSNCGCLEEALVVFKNLN 181
I++++ A E+GAL HGR IH + +M ++ID+ LGSA +DMY CG ++ A +VF+ +
Sbjct: 365 IINLVSAAAEIGALHHGRWIHGWVVRMQMKIDAFLGSAFIDMYWKCGSIKRACMVFREVT 424
Query: 182 HKELSAWNSVISGLAAHGRGADALRVFYTMQNDFEMLPNEITFTAVLTACRHTGLTEEGR 361
K+++ W ++I+G A HG G+ AL++FY MQ ++PN++TF AVLTAC H+G +G
Sbjct: 425 EKDVTVWTTMITGFAFHGYGSKALQLFYEMQE--YVMPNQVTFVAVLTACSHSGFVSQGL 482
Query: 362 RMFSLFTEHYKLK 400
R+F+ E Y ++
Sbjct: 483 RIFNSMKERYGIE 495
>dbj|BAF01120.1| hypothetical protein [Arabidopsis thaliana]
Length = 596
Score = 129 bits (323), Expect = 5e-28
Identities = 60/121 (49%), Positives = 83/121 (68%)
Frame = +2
Query: 8 SILPAITELGALSHGRSIHACLYKMDIEIDSVLGSALVDMYSNCGCLEEALVVFKNLNHK 187
S+L A +GAL GR +H + K IEI++ G+ L+D+Y CGCLEEA++VF+ L+ K
Sbjct: 311 SVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEK 370
Query: 188 ELSAWNSVISGLAAHGRGADALRVFYTMQNDFEMLPNEITFTAVLTACRHTGLTEEGRRM 367
+ W ++I+G AAHG DA +FYTM + + PNE+TF AVL+AC H GL EEGRR+
Sbjct: 371 NVYTWTAMINGFAAHGYARDAFDLFYTMLSS-HVSPNEVTFMAVLSACAHGGLVEEGRRL 429
Query: 368 F 370
F
Sbjct: 430 F 430
Score = 74.7 bits (182), Expect = 1e-11
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Frame = +2
Query: 2 IVSILPAITELGALSHGRSIHACLYKMD-IEIDSVLGSALVDMYSNCGCLEEALVVFKNL 178
+VS+L A ++ + GRS+H + ++ D +GS+LVDMY C C ++A VF +
Sbjct: 207 VVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEM 266
Query: 179 NHKELSAWNSVISGLAAHGRGADALRVFYTMQNDFEMLPNEITFTAVLTACRHTGLTEEG 358
+ + W ++I+G + VF M ++ PNE T ++VL+AC H G G
Sbjct: 267 PSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKS-DVAPNEKTLSSVLSACAHVGALHRG 325
Query: 359 RRM 367
RR+
Sbjct: 326 RRV 328
>ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g50270 gi|5734776|gb|AAD50041.1|AC007980_6
Hypothetical protein [Arabidopsis thaliana]
gi|332194410|gb|AEE32531.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 129 bits (323), Expect = 5e-28
Identities = 60/121 (49%), Positives = 83/121 (68%)
Frame = +2
Query: 8 SILPAITELGALSHGRSIHACLYKMDIEIDSVLGSALVDMYSNCGCLEEALVVFKNLNHK 187
S+L A +GAL GR +H + K IEI++ G+ L+D+Y CGCLEEA++VF+ L+ K
Sbjct: 311 SVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEK 370
Query: 188 ELSAWNSVISGLAAHGRGADALRVFYTMQNDFEMLPNEITFTAVLTACRHTGLTEEGRRM 367
+ W ++I+G AAHG DA +FYTM + + PNE+TF AVL+AC H GL EEGRR+
Sbjct: 371 NVYTWTAMINGFAAHGYARDAFDLFYTMLSS-HVSPNEVTFMAVLSACAHGGLVEEGRRL 429
Query: 368 F 370
F
Sbjct: 430 F 430
Score = 74.7 bits (182), Expect = 1e-11
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Frame = +2
Query: 2 IVSILPAITELGALSHGRSIHACLYKMD-IEIDSVLGSALVDMYSNCGCLEEALVVFKNL 178
+VS+L A ++ + GRS+H + ++ D +GS+LVDMY C C ++A VF +
Sbjct: 207 VVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEM 266
Query: 179 NHKELSAWNSVISGLAAHGRGADALRVFYTMQNDFEMLPNEITFTAVLTACRHTGLTEEG 358
+ + W ++I+G + VF M ++ PNE T ++VL+AC H G G
Sbjct: 267 PSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKS-DVAPNEKTLSSVLSACAHVGALHRG 325
Query: 359 RRM 367
RR+
Sbjct: 326 RRV 328
>gb|EMJ27978.1| hypothetical protein PRUPE_ppa018015mg [Prunus persica]
Length = 624
Score = 127 bits (320), Expect = 1e-27
Identities = 63/126 (50%), Positives = 82/126 (65%)
Frame = +2
Query: 8 SILPAITELGALSHGRSIHACLYKMDIEIDSVLGSALVDMYSNCGCLEEALVVFKNLNHK 187
S+L A T LGAL G+ IH + K IE+DS L + ++DMY CGCLE+A VF L HK
Sbjct: 257 SMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTIIDMYCKCGCLEKAFEVFNGLPHK 316
Query: 188 ELSAWNSVISGLAAHGRGADALRVFYTMQNDFEMLPNEITFTAVLTACRHTGLTEEGRRM 367
+S+WN +I GLA HG+G A+ +F MQ D + P+ ITF VL+AC H+GL EEG+R
Sbjct: 317 GISSWNCMIGGLAMHGKGEAAIELFEKMQRDM-VAPDNITFVNVLSACAHSGLVEEGQRY 375
Query: 368 FSLFTE 385
F E
Sbjct: 376 FQSMVE 381
>gb|EMJ00949.1| hypothetical protein PRUPE_ppa002774mg [Prunus persica]
Length = 635
Score = 127 bits (319), Expect = 2e-27
Identities = 64/124 (51%), Positives = 87/124 (70%)
Frame = +2
Query: 2 IVSILPAITELGALSHGRSIHACLYKMDIEIDSVLGSALVDMYSNCGCLEEALVVFKNLN 181
+VS+LPAI+ LGAL G+ IH K IEID VLGSALVDMYS CG +E+AL+VF+ L
Sbjct: 266 LVSVLPAISRLGALELGKWIHLYAGKNRIEIDDVLGSALVDMYSKCGSIEKALLVFEKLP 325
Query: 182 HKELSAWNSVISGLAAHGRGADALRVFYTMQNDFEMLPNEITFTAVLTACRHTGLTEEGR 361
+ + WN++ISGLA HGR DAL F M+ ++P+++T+ +L+AC H GL E+GR
Sbjct: 326 KRNVITWNAIISGLAMHGRVEDALDYFKKME-PAGVVPSDVTYIGILSACSHAGLVEQGR 384
Query: 362 RMFS 373
F+
Sbjct: 385 SFFN 388
>ref|XP_006344853.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Solanum tuberosum]
Length = 745
Score = 127 bits (318), Expect = 2e-27
Identities = 61/133 (45%), Positives = 90/133 (67%)
Frame = +2
Query: 2 IVSILPAITELGALSHGRSIHACLYKMDIEIDSVLGSALVDMYSNCGCLEEALVVFKNLN 181
+VS+L A T L AL G+ IHA + K ++++S+LG+ L+DMY CGC+E AL VF +
Sbjct: 376 LVSVLSACTHLSALDQGKWIHAYIRKNGLKVNSILGTTLLDMYMKCGCVENALEVFNGME 435
Query: 182 HKELSAWNSVISGLAAHGRGADALRVFYTMQNDFEMLPNEITFTAVLTACRHTGLTEEGR 361
K +S+WN++I GLA +G+ +L +F M+ + + PNE+TF AVL ACRH GL +EGR
Sbjct: 436 EKGVSSWNALILGLAMNGQVERSLDMFQKMK-ECGVTPNEVTFVAVLGACRHMGLVDEGR 494
Query: 362 RMFSLFTEHYKLK 400
F+ T HY ++
Sbjct: 495 SYFNAMTRHYNVE 507
Score = 61.2 bits (147), Expect = 1e-07
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 31/150 (20%)
Frame = +2
Query: 5 VSILPAITELGALSHGRSIHACLYKMDIEIDSVLGSALVDMYSNCG-------------- 142
VS+L A L + G S+H + ++ E L +AL+ MYS C
Sbjct: 245 VSVLSACAHLLVVQTGESVHGLVIRVGFESYVNLQNALIHMYSTCADVMAAQRLFDTSSH 304
Query: 143 -----------------CLEEALVVFKNLNHKELSAWNSVISGLAAHGRGADALRVFYTM 271
LE+A +F ++ K++ +W ++ISG A H ++ L +F M
Sbjct: 305 LDQISWNSMISGYLKCDSLEQARELFDSMTEKDVVSWTTMISGYAQHDHFSETLALFQEM 364
Query: 272 QNDFEMLPNEITFTAVLTACRHTGLTEEGR 361
++ + P+E T +VL+AC H ++G+
Sbjct: 365 LHE-DNKPDETTLVSVLSACTHLSALDQGK 393
>ref|XP_006393847.1| hypothetical protein EUTSA_v10005524mg [Eutrema salsugineum]
gi|557090486|gb|ESQ31133.1| hypothetical protein
EUTSA_v10005524mg [Eutrema salsugineum]
Length = 616
Score = 127 bits (318), Expect = 2e-27
Identities = 65/133 (48%), Positives = 85/133 (63%)
Frame = +2
Query: 2 IVSILPAITELGALSHGRSIHACLYKMDIEIDSVLGSALVDMYSNCGCLEEALVVFKNLN 181
+ + L A +LGAL G+ IH+ + + I IDSVL L+DMY+ CG +EEAL VFKN+N
Sbjct: 246 LANALSACAQLGALQQGKWIHSYVNQRRIIIDSVLACVLIDMYAKCGEMEEALAVFKNVN 305
Query: 182 HKELSAWNSVISGLAAHGRGADALRVFYTMQNDFEMLPNEITFTAVLTACRHTGLTEEGR 361
K + W ++ISG A HG G +A+ F MQ + PN ITFTAVLTAC +TGL EEG+
Sbjct: 306 RKPVQVWTALISGYAYHGHGREAISKFLDMQR-MGIKPNAITFTAVLTACSYTGLVEEGK 364
Query: 362 RMFSLFTEHYKLK 400
+F Y LK
Sbjct: 365 SVFYTMEREYNLK 377
>ref|XP_004292199.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Fragaria vesca subsp. vesca]
Length = 532
Score = 127 bits (318), Expect = 2e-27
Identities = 63/130 (48%), Positives = 84/130 (64%)
Frame = +2
Query: 8 SILPAITELGALSHGRSIHACLYKMDIEIDSVLGSALVDMYSNCGCLEEALVVFKNLNHK 187
+++ A LGAL G+ IH + + ++D +GSAL+DMY+ CG L+ ALVVF NL K
Sbjct: 247 TVVSACAHLGALDLGKEIHYYVMRNGFDLDVYIGSALIDMYAKCGALDRALVVFFNLREK 306
Query: 188 ELSAWNSVISGLAAHGRGADALRVFYTMQNDFEMLPNEITFTAVLTACRHTGLTEEGRRM 367
L WNSVI GLAAHG AL +F M + ++ PN +TF +VL+AC H GL EEGRR
Sbjct: 307 NLFCWNSVIEGLAAHGDAEKALAMFSKMARE-KIKPNGVTFVSVLSACTHAGLVEEGRRR 365
Query: 368 FSLFTEHYKL 397
FS T+ Y +
Sbjct: 366 FSSMTQDYSI 375
>ref|XP_004231299.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Solanum lycopersicum]
Length = 707
Score = 127 bits (318), Expect = 2e-27
Identities = 62/133 (46%), Positives = 90/133 (67%)
Frame = +2
Query: 2 IVSILPAITELGALSHGRSIHACLYKMDIEIDSVLGSALVDMYSNCGCLEEALVVFKNLN 181
+VS+L A T L AL G+ IHA + K ++++S+LG+ LVDMY CGC+E AL VF +
Sbjct: 255 LVSVLSACTHLSALDQGKWIHAYIRKNGLKVNSILGTTLVDMYMKCGCVENALEVFNAME 314
Query: 182 HKELSAWNSVISGLAAHGRGADALRVFYTMQNDFEMLPNEITFTAVLTACRHTGLTEEGR 361
K +S+WN++I GLA +G+ +L +F M+ + + PNE+TF AVL ACRH GL +EGR
Sbjct: 315 EKGVSSWNALILGLAMNGQVERSLDMFQKMK-ECGVTPNEVTFVAVLGACRHMGLVDEGR 373
Query: 362 RMFSLFTEHYKLK 400
F+ T HY ++
Sbjct: 374 SYFNAMTTHYNVE 386
Score = 61.6 bits (148), Expect = 1e-07
Identities = 38/151 (25%), Positives = 70/151 (46%), Gaps = 31/151 (20%)
Frame = +2
Query: 2 IVSILPAITELGALSHGRSIHACLYKMDIEIDSVLGSALVDMYS---------------- 133
++S+L A L + G S+H + ++ E L +AL+ MYS
Sbjct: 123 VLSVLSACAHLLVVQTGESVHGLVIRVGFESYVNLQNALIHMYSTCGDVMAAQRLFDTSS 182
Query: 134 ---------------NCGCLEEALVVFKNLNHKELSAWNSVISGLAAHGRGADALRVFYT 268
CG +E+A +F ++ K++ +W ++ISG A H ++ L +F
Sbjct: 183 HLDQISWNSMISGYLKCGSVEKARELFDSMAEKDVVSWTTMISGYAQHDHFSETLALFQE 242
Query: 269 MQNDFEMLPNEITFTAVLTACRHTGLTEEGR 361
M ++ + P+E T +VL+AC H ++G+
Sbjct: 243 MLHE-DSKPDETTLVSVLSACTHLSALDQGK 272
>ref|XP_006281646.1| hypothetical protein CARUB_v10027776mg [Capsella rubella]
gi|482550350|gb|EOA14544.1| hypothetical protein
CARUB_v10027776mg [Capsella rubella]
Length = 621
Score = 126 bits (317), Expect = 3e-27
Identities = 67/133 (50%), Positives = 85/133 (63%)
Frame = +2
Query: 2 IVSILPAITELGALSHGRSIHACLYKMDIEIDSVLGSALVDMYSNCGCLEEALVVFKNLN 181
+ + L A +LGAL G+ IH+ L K I IDSVLG L+DMY+ CG +EEAL VF N+
Sbjct: 251 LANALSACAQLGALEQGKWIHSYLNKERIRIDSVLGCVLIDMYAKCGEMEEALGVFNNIK 310
Query: 182 HKELSAWNSVISGLAAHGRGADALRVFYTMQNDFEMLPNEITFTAVLTACRHTGLTEEGR 361
K + AW ++ISG A HG G +A+ F MQ + PN ITFTAVLTAC +TGL EEG+
Sbjct: 311 IKSVQAWTALISGYAYHGHGREAISKFMEMQK-MGVKPNVITFTAVLTACGYTGLVEEGK 369
Query: 362 RMFSLFTEHYKLK 400
+F Y LK
Sbjct: 370 LIFYSMERDYNLK 382
Score = 55.5 bits (132), Expect = 7e-06
Identities = 27/93 (29%), Positives = 53/93 (56%)
Frame = +2
Query: 95 DSVLGSALVDMYSNCGCLEEALVVFKNLNHKELSAWNSVISGLAAHGRGADALRVFYTMQ 274
D+V ++++ Y G ++ AL +F+ + K +W ++ISG G +AL++F+ MQ
Sbjct: 181 DAVSWNSVIKGYVKAGKMDIALTLFQKMAEKNAISWTTMISGYVEAGMNNEALQLFHEMQ 240
Query: 275 NDFEMLPNEITFTAVLTACRHTGLTEEGRRMFS 373
N ++ P+ ++ L+AC G E+G+ + S
Sbjct: 241 NS-DVEPDNVSLANALSACAQLGALEQGKWIHS 272
>ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 126 bits (317), Expect = 3e-27
Identities = 59/131 (45%), Positives = 86/131 (65%)
Frame = +2
Query: 8 SILPAITELGALSHGRSIHACLYKMDIEIDSVLGSALVDMYSNCGCLEEALVVFKNLNHK 187
S+L A +GAL GR +H + K IEI++ +G+ L+D Y+ CGCLEEA++VF+ L K
Sbjct: 311 SVLSACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFERLREK 370
Query: 188 ELSAWNSVISGLAAHGRGADALRVFYTMQNDFEMLPNEITFTAVLTACRHTGLTEEGRRM 367
+ W ++I+G AAHG A+ +F+TM + + PNE+TF VL+AC H GL EEGRR+
Sbjct: 371 NVYTWTAMINGFAAHGYAIGAVDLFHTMLSS-HVSPNEVTFIVVLSACAHGGLVEEGRRL 429
Query: 368 FSLFTEHYKLK 400
F E + L+
Sbjct: 430 FLSMKERFNLE 440
Score = 75.9 bits (185), Expect = 5e-12
Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Frame = +2
Query: 2 IVSILPAITELGALSHGRSIHACLYKMD-IEIDSVLGSALVDMYSNCGCLEEALVVFKNL 178
+VS+L A + + GRSIH + + D +GS+LVDMY CGC ++A VF +
Sbjct: 207 VVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKCGCYDDAQKVFDEM 266
Query: 179 NHKELSAWNSVISGLAAHGRGADALRVFYTMQNDFEMLPNEITFTAVLTACRHTGLTEEG 358
+ + W ++I+G + VF M ++ PNE T ++VL+AC H G G
Sbjct: 267 PSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKS-DVAPNEKTLSSVLSACAHVGALHRG 325
Query: 359 RRM 367
RR+
Sbjct: 326 RRV 328
>gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 126 bits (316), Expect = 3e-27
Identities = 66/133 (49%), Positives = 85/133 (63%)
Frame = +2
Query: 2 IVSILPAITELGALSHGRSIHACLYKMDIEIDSVLGSALVDMYSNCGCLEEALVVFKNLN 181
+ S L A ++LGAL G+ IH+ K IDSVL L+DMY+ CG +EEAL VFKN+
Sbjct: 246 LASALSACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMK 305
Query: 182 HKELSAWNSVISGLAAHGRGADALRVFYTMQNDFEMLPNEITFTAVLTACRHTGLTEEGR 361
K + W ++ISG A HG G +A+ F MQN + PN ITFTAVLTAC +TGL EEG+
Sbjct: 306 TKSVQVWTALISGYAYHGLGREAISKFLEMQN-MGVKPNAITFTAVLTACSYTGLVEEGK 364
Query: 362 RMFSLFTEHYKLK 400
+F+ Y LK
Sbjct: 365 SVFNTIERDYNLK 377
>ref|XP_006382794.1| hypothetical protein POPTR_0005s05510g [Populus trichocarpa]
gi|550338164|gb|ERP60591.1| hypothetical protein
POPTR_0005s05510g [Populus trichocarpa]
Length = 648
Score = 125 bits (315), Expect = 4e-27
Identities = 58/129 (44%), Positives = 91/129 (70%)
Frame = +2
Query: 2 IVSILPAITELGALSHGRSIHACLYKMDIEIDSVLGSALVDMYSNCGCLEEALVVFKNLN 181
++S++ A TE GAL GR H + +M I++D+ LGSAL+DMY CG +E A VFK +N
Sbjct: 369 MISLVSAATESGALDQGRWAHGWVIRMQIKLDAFLGSALIDMYCKCGSIERASRVFKEIN 428
Query: 182 HKELSAWNSVISGLAAHGRGADALRVFYTMQNDFEMLPNEITFTAVLTACRHTGLTEEGR 361
K+++ W ++I+GLA HG G+ AL +F MQ D + P+++TF +VL+AC H+GL ++G
Sbjct: 429 KKDVTVWTTMITGLAFHGYGSKALELFSEMQED--VSPDDVTFVSVLSACSHSGLVDQGI 486
Query: 362 RMFSLFTEH 388
++FS T++
Sbjct: 487 KVFSSMTDY 495
Score = 59.7 bits (143), Expect = 4e-07
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 32/152 (21%)
Frame = +2
Query: 2 IVSILPAITELGALSHGRSIHACLYKMDIEIDS--VLGSALVDMYSNCGCLEEALVVFKN 175
I+ +L + +LG + G+++H + + I S +LG+AL+DMY C +E AL F
Sbjct: 235 ILGLLVSCGQLGNVKFGKAVHGWMERRKPTISSNLILGNALLDMYVKCQKVELALRTFGA 294
Query: 176 LNHKELSAWNSVISGLAAHGRGADALRVFYTM-----------------QNDF------- 283
L K++ +WN +++G A G A FY M + DF
Sbjct: 295 LKEKDIVSWNMIVAGCAKVGEFEQARLFFYQMPCRDIVSWNSLVTGYACRGDFASVKELI 354
Query: 284 ------EMLPNEITFTAVLTACRHTGLTEEGR 361
+++P+ +T ++++A +G ++GR
Sbjct: 355 VDMVMEKVIPDTVTMISLVSAATESGALDQGR 386
>ref|XP_002328495.1| predicted protein [Populus trichocarpa]
Length = 580
Score = 125 bits (315), Expect = 4e-27
Identities = 58/129 (44%), Positives = 91/129 (70%)
Frame = +2
Query: 2 IVSILPAITELGALSHGRSIHACLYKMDIEIDSVLGSALVDMYSNCGCLEEALVVFKNLN 181
++S++ A TE GAL GR H + +M I++D+ LGSAL+DMY CG +E A VFK +N
Sbjct: 301 MISLVSAATESGALDQGRWAHGWVIRMQIKLDAFLGSALIDMYCKCGSIERASRVFKEIN 360
Query: 182 HKELSAWNSVISGLAAHGRGADALRVFYTMQNDFEMLPNEITFTAVLTACRHTGLTEEGR 361
K+++ W ++I+GLA HG G+ AL +F MQ D + P+++TF +VL+AC H+GL ++G
Sbjct: 361 KKDVTVWTTMITGLAFHGYGSKALELFSEMQED--VSPDDVTFVSVLSACSHSGLVDQGI 418
Query: 362 RMFSLFTEH 388
++FS T++
Sbjct: 419 KVFSSMTDY 427
Score = 59.3 bits (142), Expect = 5e-07
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 32/152 (21%)
Frame = +2
Query: 2 IVSILPAITELGALSHGRSIHACLYKMDIEIDS--VLGSALVDMYSNCGCLEEALVVFKN 175
I+ +L + +LG + G+++H + + I S +LG+AL+DMY C +E AL F
Sbjct: 167 ILGLLVSCGQLGNVKFGKAVHGWMERRKPTISSNLILGNALLDMYVKCQKVELALRTFGA 226
Query: 176 LNHKELSAWNSVISGLAAHGRGADALRVFYTM-----------------QNDF------- 283
L K++ +WN +++G A G A FY M + DF
Sbjct: 227 LKEKDIVSWNMIVAGCAKVGELEQARLFFYQMPCRDIVSWNSLVTGYACRGDFASVKELI 286
Query: 284 ------EMLPNEITFTAVLTACRHTGLTEEGR 361
+++P+ +T ++++A +G ++GR
Sbjct: 287 VDMVMEKVIPDTVTMISLVSAATESGALDQGR 318
>ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297312591|gb|EFH43015.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 649
Score = 125 bits (314), Expect = 6e-27
Identities = 65/133 (48%), Positives = 84/133 (63%)
Frame = +2
Query: 2 IVSILPAITELGALSHGRSIHACLYKMDIEIDSVLGSALVDMYSNCGCLEEALVVFKNLN 181
+ + L A +LGAL G+ IH+ L K I +DSVLG L+DMY+ CG + EAL VFKN+
Sbjct: 279 LANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQ 338
Query: 182 HKELSAWNSVISGLAAHGRGADALRVFYTMQNDFEMLPNEITFTAVLTACRHTGLTEEGR 361
K + AW ++ISG A HG G +A+ F MQ + PN ITFT VLTAC +TGL EEG+
Sbjct: 339 RKSVQAWTALISGYAYHGHGREAISKFMEMQK-MGIKPNVITFTTVLTACSYTGLVEEGK 397
Query: 362 RMFSLFTEHYKLK 400
+F Y LK
Sbjct: 398 LIFYNMERDYNLK 410
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/97 (28%), Positives = 56/97 (57%)
Frame = +2
Query: 95 DSVLGSALVDMYSNCGCLEEALVVFKNLNHKELSAWNSVISGLAAHGRGADALRVFYTMQ 274
D+V ++++ Y+ G ++ AL +F+ + K +W ++ISG G +AL++F+ MQ
Sbjct: 209 DAVSWNSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQ 268
Query: 275 NDFEMLPNEITFTAVLTACRHTGLTEEGRRMFSLFTE 385
N ++ P+ ++ L+AC G E+G+ + S T+
Sbjct: 269 NS-DVEPDNVSLANALSACAQLGALEQGKWIHSYLTK 304
>gb|EXC24155.1| hypothetical protein L484_015170 [Morus notabilis]
Length = 602
Score = 124 bits (312), Expect = 1e-26
Identities = 61/124 (49%), Positives = 84/124 (67%)
Frame = +2
Query: 2 IVSILPAITELGALSHGRSIHACLYKMDIEIDSVLGSALVDMYSNCGCLEEALVVFKNLN 181
+VS+LPAI+ LGAL G+ +H + DIEI+ VLGSALVDMYS CG +E+AL VF+ L
Sbjct: 233 LVSVLPAISRLGALELGKWVHLFAERNDIEINDVLGSALVDMYSKCGSIEKALQVFERLP 292
Query: 182 HKELSAWNSVISGLAAHGRGADALRVFYTMQNDFEMLPNEITFTAVLTACRHTGLTEEGR 361
+ WN++I+GLA HGR DAL F M+ + P ++T+ +L+AC H GL E+GR
Sbjct: 293 KENAITWNAIINGLAMHGRAKDALHYFSRME-QANVTPTDVTYIGLLSACSHAGLVEKGR 351
Query: 362 RMFS 373
F+
Sbjct: 352 SFFN 355
>gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227462998|gb|ACP39951.1| pentatricopeptide repeat
protein [Gossypium hirsutum]
Length = 532
Score = 124 bits (312), Expect = 1e-26
Identities = 63/133 (47%), Positives = 93/133 (69%)
Frame = +2
Query: 2 IVSILPAITELGALSHGRSIHACLYKMDIEIDSVLGSALVDMYSNCGCLEEALVVFKNLN 181
IV L A + LG+L HGR IHA + + E+D VLG+ALVDMY+ CGC+E A VF+ +
Sbjct: 243 IVGALTACSYLGSLDHGRWIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIACSVFEKMP 302
Query: 182 HKELSAWNSVISGLAAHGRGADALRVFYTMQNDFEMLPNEITFTAVLTACRHTGLTEEGR 361
K+ A+ S+ISGLA HG+ ADA+++F MQ++ +++PNE+TF VL+AC GL +EG
Sbjct: 303 DKDAFAFTSLISGLANHGQSADAIQLFGRMQSE-KVIPNEVTFICVLSACSRMGLVDEGL 361
Query: 362 RMFSLFTEHYKLK 400
R+F+ + Y ++
Sbjct: 362 RIFNCMSVVYGIE 374
>ref|XP_006305855.1| hypothetical protein CARUB_v10010934mg [Capsella rubella]
gi|482574566|gb|EOA38753.1| hypothetical protein
CARUB_v10010934mg [Capsella rubella]
Length = 574
Score = 124 bits (311), Expect = 1e-26
Identities = 59/130 (45%), Positives = 85/130 (65%)
Frame = +2
Query: 11 ILPAITELGALSHGRSIHACLYKMDIEIDSVLGSALVDMYSNCGCLEEALVVFKNLNHKE 190
+L A +GAL GR +H + K IEI++ +G+ L+D+Y+ CGCLEEA++VF+ L K
Sbjct: 312 VLSACAHVGALHLGRRVHCYVIKNSIEINTTMGTTLIDLYAKCGCLEEAILVFERLPEKN 371
Query: 191 LSAWNSVISGLAAHGRGADALRVFYTMQNDFEMLPNEITFTAVLTACRHTGLTEEGRRMF 370
+ W ++I+GLAAHG A+ +F TM PNE+TF AVL+AC H GL EEG+R+F
Sbjct: 372 VYTWTAMINGLAAHGHARGAVDLFQTMLRS-HTSPNEVTFIAVLSACAHGGLVEEGQRLF 430
Query: 371 SLFTEHYKLK 400
E + L+
Sbjct: 431 LSMKERFNLE 440
Score = 74.3 bits (181), Expect = 2e-11
Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 2/124 (1%)
Frame = +2
Query: 2 IVSILPAITELGALSHGRSIHACLYKMD-IEIDSVLGSALVDMYSNCGCLEEALVVFKNL 178
+VS+L A + + G+S+H + ++ D +GS+LVD Y CGC ++A VF +
Sbjct: 207 VVSVLSATAKAADVRFGKSVHGFYLETGRVKCDVFIGSSLVDFYGKCGCYDDAQKVFDEM 266
Query: 179 NHKELSAWNSVISGLAAHGRGAD-ALRVFYTMQNDFEMLPNEITFTAVLTACRHTGLTEE 355
+ + W ++I+G GR D L VF M + +++PNE T + VL+AC H G
Sbjct: 267 PSRNVVTWTALIAGY-VQGRCFDKGLSVFEEM-IESDVVPNEKTLSIVLSACAHVGALHL 324
Query: 356 GRRM 367
GRR+
Sbjct: 325 GRRV 328