BLASTX nr result

ID: Zingiber25_contig00038899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00038899
         (335 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_189337.1| transcription factor TCP20 [Arabidopsis thalian...    69   6e-10
ref|XP_006365022.1| PREDICTED: transcription factor TCP20-like [...    68   1e-09
ref|XP_006395493.1| hypothetical protein EUTSA_v10004391mg [Eutr...    68   1e-09
ref|XP_002298640.1| TCP family transcription factor family prote...    67   2e-09
ref|NP_001234590.1| TCP transcription factor 18 [Solanum lycoper...    67   2e-09
ref|XP_002512905.1| transcription factor, putative [Ricinus comm...    67   3e-09
gb|EOX99738.1| Teosinte branched 1 isoform 1 [Theobroma cacao] g...    65   7e-09
ref|XP_002271949.1| PREDICTED: transcription factor TCP20-like [...    65   9e-09
ref|XP_006290367.1| hypothetical protein CARUB_v10017630mg [Caps...    65   1e-08
ref|XP_006484165.1| PREDICTED: transcription factor TCP20-like [...    64   2e-08
ref|XP_006437974.1| hypothetical protein CICLE_v10032374mg [Citr...    64   2e-08
gb|EOY02849.1| Teosinte branched 1 [Theobroma cacao]                   64   2e-08
ref|XP_002877010.1| hypothetical protein ARALYDRAFT_484486 [Arab...    64   2e-08
ref|XP_004148022.1| PREDICTED: transcription factor TCP20-like [...    63   5e-08
ref|XP_002328883.1| predicted protein [Populus trichocarpa] gi|5...    62   6e-08
gb|EMJ18947.1| hypothetical protein PRUPE_ppa009925mg [Prunus pe...    62   1e-07
gb|ADL36832.1| TCP domain class transcription factor [Malus dome...    62   1e-07
ref|XP_002304668.1| hypothetical protein POPTR_0003s16630g [Popu...    61   1e-07
gb|EMJ24473.1| hypothetical protein PRUPE_ppa010032mg [Prunus pe...    61   2e-07
ref|XP_004304531.1| PREDICTED: transcription factor TCP20-like [...    60   2e-07

>ref|NP_189337.1| transcription factor TCP20 [Arabidopsis thaliana]
           gi|75273954|sp|Q9LSD5.1|TCP20_ARATH RecName:
           Full=Transcription factor TCP20
           gi|9279624|dbj|BAB01082.1| unnamed protein product
           [Arabidopsis thaliana] gi|11595501|emb|CAC18326.1|
           putative transcription factor [Arabidopsis thaliana]
           gi|26451403|dbj|BAC42801.1| unknown protein [Arabidopsis
           thaliana] gi|29824137|gb|AAP04029.1| unknown protein
           [Arabidopsis thaliana] gi|332643733|gb|AEE77254.1|
           transcription factor TCP20 [Arabidopsis thaliana]
          Length = 314

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 37/75 (49%), Positives = 43/75 (57%)
 Frame = +2

Query: 71  RIGFAGLELPGSSINPMSFTSLLSGQKQAMTGLELGLSQHAQLGILNPPHSFTQFYHHTG 250
           RIGF G + PG  +  MSF S+L G    M GLELGLSQ   +G+LN P SFTQ Y   G
Sbjct: 222 RIGFPGFDFPG--VGHMSFASILGGNHNQMPGLELGLSQEGNVGVLN-PQSFTQIYQQMG 278

Query: 251 QGSAAATVSAGDHLH 295
           Q  A A      H+H
Sbjct: 279 QAQAQAQGRVLHHMH 293


>ref|XP_006365022.1| PREDICTED: transcription factor TCP20-like [Solanum tuberosum]
          Length = 279

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = +2

Query: 2   GFNAALFQSAAAMGAVPLASNLPRIGFAGLELPGSS-INPMSFTSLLSGQKQAMTGLELG 178
           GF ++   S+A++G+      L +IGF G +LP ++ +NPMSFTS+L G  Q + GLELG
Sbjct: 174 GFQSSSAPSSASLGSESSNYYLQKIGFPGFDLPAATNMNPMSFTSILGGSNQQLPGLELG 233

Query: 179 LSQHAQLGILNPPHSFTQFYH 241
           LSQ   LG+LN  +   +  H
Sbjct: 234 LSQEGHLGVLNQIYQQARMQH 254


>ref|XP_006395493.1| hypothetical protein EUTSA_v10004391mg [Eutrema salsugineum]
           gi|557092132|gb|ESQ32779.1| hypothetical protein
           EUTSA_v10004391mg [Eutrema salsugineum]
          Length = 382

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 40/73 (54%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
 Frame = +2

Query: 71  RIGFAGLELPG-SSINPMSFTSLL--SGQKQAMTGLELGLSQHAQLGILNPPHSFTQFYH 241
           RIGF G E PG S+I  MSF S+L  SG    M GLELGLSQ   +G+LN P SFTQ Y 
Sbjct: 273 RIGFPGFEFPGVSNIGAMSFASILGASGNNNQMPGLELGLSQEGNVGVLN-PQSFTQIYQ 331

Query: 242 HTGQGSAAATVSA 280
             GQ  A A   A
Sbjct: 332 QMGQAQAQAQAQA 344


>ref|XP_002298640.1| TCP family transcription factor family protein [Populus
           trichocarpa] gi|222845898|gb|EEE83445.1| TCP family
           transcription factor family protein [Populus
           trichocarpa]
          Length = 320

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 35/74 (47%), Positives = 48/74 (64%)
 Frame = +2

Query: 29  AAAMGAVPLASNLPRIGFAGLELPGSSINPMSFTSLLSGQKQAMTGLELGLSQHAQLGIL 208
           AAA G    +S L ++GF G +LPG+++ PMSFTS+L G  Q + GLELGLSQ   +G+L
Sbjct: 227 AAAAGG---SSYLQKLGFPGFDLPGNNMGPMSFTSILGGGTQQLPGLELGLSQDGHIGVL 283

Query: 209 NPPHSFTQFYHHTG 250
           + P +  Q Y   G
Sbjct: 284 S-PQALNQIYQQMG 296


>ref|NP_001234590.1| TCP transcription factor 18 [Solanum lycopersicum]
           gi|306416847|gb|ADM87267.1| TCP transcription factor 18
           [Solanum lycopersicum]
          Length = 272

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
 Frame = +2

Query: 2   GFNAALFQSAAAMGAVPLASNLPRIGFAGLELPGS-SINPMSFTSLLSGQKQAMTGLELG 178
           GF ++   S+A++G+      L +IGF G +LP + S+NPM FTS+L G  Q + GLELG
Sbjct: 171 GFQSSSAPSSASLGSDSSNYYLQKIGFPGFDLPAATSMNPMCFTSILGGSNQQLPGLELG 230

Query: 179 LSQHAQLGILNPPHSFTQFYH 241
           LSQ   LG+LN  +   +  H
Sbjct: 231 LSQEGHLGVLNQIYQQARMQH 251


>ref|XP_002512905.1| transcription factor, putative [Ricinus communis]
           gi|223547916|gb|EEF49408.1| transcription factor,
           putative [Ricinus communis]
          Length = 320

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 34/67 (50%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
 Frame = +2

Query: 56  ASNLPRIGFAGLELPGSSINPMSFTSLLSG-QKQAMTGLELGLSQHAQLGILNPPHSFTQ 232
           +S L +IGF G +LPG+++ PMSFTS+L G   Q + GLELGLSQ   +G+LN   +F+Q
Sbjct: 230 SSYLQKIGFPGFDLPGNNMGPMSFTSILGGTSNQQIPGLELGLSQDGHIGVLN-SQAFSQ 288

Query: 233 FYHHTGQ 253
            Y   GQ
Sbjct: 289 IYQQMGQ 295


>gb|EOX99738.1| Teosinte branched 1 isoform 1 [Theobroma cacao]
           gi|508707843|gb|EOX99739.1| Teosinte branched 1 isoform
           1 [Theobroma cacao]
          Length = 294

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 32/66 (48%), Positives = 45/66 (68%)
 Frame = +2

Query: 56  ASNLPRIGFAGLELPGSSINPMSFTSLLSGQKQAMTGLELGLSQHAQLGILNPPHSFTQF 235
           ++N+P+ GF GLE P  ++  +SF+SLL+G  Q + GLELGLSQ    G+LN   +F+QF
Sbjct: 205 SNNIPKYGFHGLEFPHMNMGFVSFSSLLNGSNQQVPGLELGLSQDPHFGVLN-SQAFSQF 263

Query: 236 YHHTGQ 253
           Y   GQ
Sbjct: 264 YQQMGQ 269


>ref|XP_002271949.1| PREDICTED: transcription factor TCP20-like [Vitis vinifera]
          Length = 296

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
 Frame = +2

Query: 20  FQSAAAMGAVPLASN----LPRIGFAGLELPGSSINPMSFTSLLSGQKQAMTGLELGLSQ 187
           FQS++      L +     L +I F G +LP +++ PMSFTS+L G  Q + GLELGLSQ
Sbjct: 184 FQSSSGPSTTNLGNESSNYLQKIAFPGFDLPATNLGPMSFTSILGGSNQQLPGLELGLSQ 243

Query: 188 HAQLGILNPPHSFTQFYHHTGQ 253
              +G+LN   + +Q Y   GQ
Sbjct: 244 DGHIGVLN-SQALSQIYQQMGQ 264


>ref|XP_006290367.1| hypothetical protein CARUB_v10017630mg [Capsella rubella]
           gi|482559074|gb|EOA23265.1| hypothetical protein
           CARUB_v10017630mg [Capsella rubella]
          Length = 328

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 38/80 (47%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
 Frame = +2

Query: 71  RIGFAGLELPGSSINPMSFTSLLSG---QKQAMTGLELGLSQHAQLGILNPPHSFTQFYH 241
           RIGF G + PG  + PMSF S+L G       M GLELGLSQ   +G+LN P SFTQ Y 
Sbjct: 231 RIGFPGFDFPG--VGPMSFASILGGGGGNTHQMPGLELGLSQEGNVGVLN-PQSFTQLYQ 287

Query: 242 HTGQGSAAATVSAG--DHLH 295
             GQ  A A        H+H
Sbjct: 288 QMGQAQAQAQAQGRVLQHIH 307


>ref|XP_006484165.1| PREDICTED: transcription factor TCP20-like [Citrus sinensis]
          Length = 274

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 37/98 (37%), Positives = 55/98 (56%)
 Frame = +2

Query: 2   GFNAALFQSAAAMGAVPLASNLPRIGFAGLELPGSSINPMSFTSLLSGQKQAMTGLELGL 181
           GF     Q  +  G+  L++N P+ GF G+E P  ++  MSF+S+LSG    + GLELGL
Sbjct: 162 GFIQNSGQLTSNFGSENLSAN-PKFGFHGIEFPNMNMGLMSFSSMLSGASHQIPGLELGL 220

Query: 182 SQHAQLGILNPPHSFTQFYHHTGQGSAAATVSAGDHLH 295
           SQ A +G++N   + +QFY   G   +A+      H H
Sbjct: 221 SQDAHVGVMN-SQAISQFYQQMGHHRSASGSLNQQHQH 257


>ref|XP_006437974.1| hypothetical protein CICLE_v10032374mg [Citrus clementina]
           gi|557540170|gb|ESR51214.1| hypothetical protein
           CICLE_v10032374mg [Citrus clementina]
          Length = 274

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 37/98 (37%), Positives = 55/98 (56%)
 Frame = +2

Query: 2   GFNAALFQSAAAMGAVPLASNLPRIGFAGLELPGSSINPMSFTSLLSGQKQAMTGLELGL 181
           GF     Q  +  G+  L++N P+ GF G+E P  ++  MSF+S+LSG    + GLELGL
Sbjct: 162 GFIQNSGQLTSNFGSENLSAN-PKFGFHGIEFPNMNMGLMSFSSMLSGASHQIPGLELGL 220

Query: 182 SQHAQLGILNPPHSFTQFYHHTGQGSAAATVSAGDHLH 295
           SQ A +G++N   + +QFY   G   +A+      H H
Sbjct: 221 SQDAHVGVMN-SQAISQFYQQMGHHRSASGSLNQQHQH 257


>gb|EOY02849.1| Teosinte branched 1 [Theobroma cacao]
          Length = 314

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
 Frame = +2

Query: 20  FQSAAAMGAVPLASN----LPRIGFAGLELPGSSINPMSFTSLLSGQKQAMTGLELGLSQ 187
           FQS++      L S     L +IGF G +LP +++  MSFTS+L G  Q + GLELGLSQ
Sbjct: 205 FQSSSGPSTTNLGSESSNYLQKIGFPGFDLPATNMGQMSFTSILGGASQQLPGLELGLSQ 264

Query: 188 HAQLGILNPPHSFTQFYHHTGQ 253
              +G+LN   + +Q Y   GQ
Sbjct: 265 DGHIGLLN-TQALSQIYQQMGQ 285


>ref|XP_002877010.1| hypothetical protein ARALYDRAFT_484486 [Arabidopsis lyrata subsp.
           lyrata] gi|297322848|gb|EFH53269.1| hypothetical protein
           ARALYDRAFT_484486 [Arabidopsis lyrata subsp. lyrata]
          Length = 318

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 38/80 (47%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
 Frame = +2

Query: 71  RIGFAGLELPGSSINPMSFTSLLSG---QKQAMTGLELGLSQHAQLGILNPPHSFTQFYH 241
           RIGF G + PG  + PMSF S+L G       M GLELGLSQ   +G+LN P SFTQ Y 
Sbjct: 221 RIGFPGFDFPG--VGPMSFASILGGAGGNHNQMPGLELGLSQEGNVGVLN-PQSFTQIYQ 277

Query: 242 HTGQGSAAATVSAG--DHLH 295
             GQ  A A        H+H
Sbjct: 278 QMGQAQAQAQAQGRVLHHMH 297


>ref|XP_004148022.1| PREDICTED: transcription factor TCP20-like [Cucumis sativus]
          Length = 296

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 10/88 (11%)
 Frame = +2

Query: 20  FQSAAAMGAVPL--ASNLP--------RIGFAGLELPGSSINPMSFTSLLSGQKQAMTGL 169
           FQS+ A  AV    A+NLP        ++GF   +L  +++ PMSFTS+L    Q + GL
Sbjct: 189 FQSSTAAAAVAAQSATNLPNETSNYFHKLGFPPFDLTPTNMGPMSFTSILGANTQQLPGL 248

Query: 170 ELGLSQHAQLGILNPPHSFTQFYHHTGQ 253
           ELGLSQ   +G+LN P +  Q Y   GQ
Sbjct: 249 ELGLSQDGHIGVLN-PQALNQIYQQMGQ 275


>ref|XP_002328883.1| predicted protein [Populus trichocarpa]
           gi|566212477|ref|XP_006373221.1| TCP family
           transcription factor family protein [Populus
           trichocarpa] gi|550319927|gb|ERP51018.1| TCP family
           transcription factor family protein [Populus
           trichocarpa]
          Length = 321

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 30/66 (45%), Positives = 44/66 (66%)
 Frame = +2

Query: 56  ASNLPRIGFAGLELPGSSINPMSFTSLLSGQKQAMTGLELGLSQHAQLGILNPPHSFTQF 235
           +S L + GF+G ++PG++I PMS TS+L    Q + GLELGLSQ   +G+L+ P + +Q 
Sbjct: 236 SSYLQKNGFSGFDMPGNNIGPMSLTSILGVGSQQLPGLELGLSQDGHIGVLS-PQALSQI 294

Query: 236 YHHTGQ 253
           Y   GQ
Sbjct: 295 YQQMGQ 300


>gb|EMJ18947.1| hypothetical protein PRUPE_ppa009925mg [Prunus persica]
          Length = 272

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 39/97 (40%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
 Frame = +2

Query: 20  FQSAAAMGAVPLASN----LPRIGFAGLELPGSSINPMSFTSLL-SGQKQAMTGLELGLS 184
           FQS++      L S     + +IGF G +LP S++ PMSFTS+L  G  Q + GLELGLS
Sbjct: 161 FQSSSGPSTTNLGSESSNYMQKIGFPGFDLPVSNMGPMSFTSILGGGSNQQLPGLELGLS 220

Query: 185 QHAQLGILNPPHSFTQFYHHTGQGSAAATVSAGDHLH 295
           Q   +G+LN   + +Q Y   G     A V    H H
Sbjct: 221 QDGHIGVLN-SQALSQIYQQMGH----ARVHQHQHQH 252


>gb|ADL36832.1| TCP domain class transcription factor [Malus domestica]
          Length = 315

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 37/88 (42%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
 Frame = +2

Query: 2   GFNAALFQSAAAMGAVPLASN-LPRIGFAGLELPGSSINPMSFTSLLSG----QKQAMTG 166
           GF ++    +A       +SN L +IGF G +LP S++ PMSFTS+L G    Q+Q + G
Sbjct: 201 GFQSSSGPPSATTNLGTESSNYLQKIGFPGFDLPVSNLGPMSFTSILGGGNQQQQQQLPG 260

Query: 167 LELGLSQHAQLGILNPPHSFTQFYHHTG 250
           LELGLSQ   +G+LN   + +Q Y   G
Sbjct: 261 LELGLSQDGHIGVLN-SQALSQIYQQMG 287


>ref|XP_002304668.1| hypothetical protein POPTR_0003s16630g [Populus trichocarpa]
           gi|222842100|gb|EEE79647.1| hypothetical protein
           POPTR_0003s16630g [Populus trichocarpa]
          Length = 302

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/67 (46%), Positives = 41/67 (61%)
 Frame = +2

Query: 56  ASNLPRIGFAGLELPGSSINPMSFTSLLSGQKQAMTGLELGLSQHAQLGILNPPHSFTQF 235
           +S LP+ GF G+E P  ++  MSF S+ SG  Q + GLELGLSQ     +LN P + + F
Sbjct: 210 SSTLPKYGFQGVEFPNINMGLMSFYSMFSGTNQQLPGLELGLSQDGHSAMLN-PQALSPF 268

Query: 236 YHHTGQG 256
           YH   QG
Sbjct: 269 YHQMVQG 275


>gb|EMJ24473.1| hypothetical protein PRUPE_ppa010032mg [Prunus persica]
          Length = 267

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 31/84 (36%), Positives = 48/84 (57%)
 Frame = +2

Query: 2   GFNAALFQSAAAMGAVPLASNLPRIGFAGLELPGSSINPMSFTSLLSGQKQAMTGLELGL 181
           GF+    Q+    G+  L     + GF G ++PG ++  M F ++LSG  Q + GLELGL
Sbjct: 165 GFDQNSGQATVNFGSENLNIMQHKFGFHGFDVPGMNLGSMGFPTILSGSNQQVPGLELGL 224

Query: 182 SQHAQLGILNPPHSFTQFYHHTGQ 253
           SQ   +G+++   + TQF+ H GQ
Sbjct: 225 SQDGHIGVVS-SQALTQFHQHKGQ 247


>ref|XP_004304531.1| PREDICTED: transcription factor TCP20-like [Fragaria vesca subsp.
           vesca]
          Length = 333

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
 Frame = +2

Query: 26  SAAAMGAVPLASN-LPRIGFAGLELPGSSINPMSFTSLLSGQKQAMTGLELGLSQHAQLG 202
           S   +G    +SN L +IG  G +LP +++ PMSFTS+L G  Q + GLELGLSQ   LG
Sbjct: 221 STTNLGGTESSSNYLQKIGLPGFDLPVTNMGPMSFTSILGGGSQQLPGLELGLSQDGHLG 280

Query: 203 ILN 211
           +LN
Sbjct: 281 VLN 283


Top