BLASTX nr result
ID: Zingiber25_contig00038834
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00038834
(790 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004960699.1| PREDICTED: DNA polymerase alpha subunit B-li... 309 8e-82
dbj|BAK05466.1| predicted protein [Hordeum vulgare subsp. vulgare] 304 2e-80
ref|XP_002438164.1| hypothetical protein SORBIDRAFT_10g009040 [S... 302 1e-79
gb|AFW56457.1| hypothetical protein ZEAMMB73_686460 [Zea mays] 300 4e-79
ref|NP_001130410.1| uncharacterized protein LOC100191506 [Zea ma... 300 4e-79
gb|EEE53009.1| hypothetical protein OsJ_35699 [Oryza sativa Japo... 296 7e-78
ref|NP_001066483.1| Os12g0242900 [Oryza sativa Japonica Group] g... 296 7e-78
gb|ABG21942.1| DNA polymerase alpha subunit B family protein, ex... 296 7e-78
gb|ABA97199.2| DNA polymerase alpha subunit B family protein, ex... 296 7e-78
gb|EEC69071.1| hypothetical protein OsI_37935 [Oryza sativa Indi... 295 9e-78
ref|XP_003578733.1| PREDICTED: DNA polymerase alpha subunit B-li... 295 2e-77
ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [V... 295 2e-77
ref|XP_006663930.1| PREDICTED: DNA polymerase alpha subunit B-li... 294 2e-77
gb|EMT19418.1| DNA polymerase alpha subunit B [Aegilops tauschii] 293 6e-77
gb|EMJ25471.1| hypothetical protein PRUPE_ppa018609mg [Prunus pe... 288 2e-75
ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-li... 284 2e-74
ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B-li... 280 5e-73
ref|XP_003601821.1| DNA polymerase alpha subunit B [Medicago tru... 279 9e-73
gb|ESW35722.1| hypothetical protein PHAVU_001G259300g [Phaseolus... 278 1e-72
ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-li... 276 4e-72
>ref|XP_004960699.1| PREDICTED: DNA polymerase alpha subunit B-like [Setaria italica]
Length = 627
Score = 309 bits (791), Expect = 8e-82
Identities = 150/222 (67%), Positives = 182/222 (81%), Gaps = 2/222 (0%)
Frame = +3
Query: 3 DSDHPEIKKGTVDREFDEIFRVEIIQKLEDYAKYMGSAAHVILLPSIRDAHHDFVFPQPA 182
DSDHP+IKKGTVD+ F +IF EI++K++D+ +Y+G+ VIL+PS+RDAHHDFVFPQPA
Sbjct: 406 DSDHPDIKKGTVDQTFHDIFHFEILRKIQDFTQYLGNTVRVILIPSVRDAHHDFVFPQPA 465
Query: 183 FDIHLTDDIKPQITCLPNPGFFSANEIAIGCCTVDILKQLSGEEISRIPIDTVSGDRMAR 362
FD++L +DI QI+CL NP FS N+I GCCTVDILKQLSGEEISR P GDR+ R
Sbjct: 466 FDLNLPEDITHQISCLANPSLFSCNQIHFGCCTVDILKQLSGEEISRKPPVGKPGDRIGR 525
Query: 363 LATHILRQQSFYPLHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKFSH--KGS 536
LATHIL+QQS+YPL+PPA GVP+DFSLA EALEI PDVL+L SDLAPFVK +GS
Sbjct: 526 LATHILKQQSYYPLYPPAAGVPLDFSLAKEALEISSAPDVLLLTSDLAPFVKVLSLGEGS 585
Query: 537 DGEVECLCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 662
D + + +C+NPGRLAKGIGGGTFVEL+YN ++D TKASIIRI
Sbjct: 586 DVQKQFICMNPGRLAKGIGGGTFVELYYNEDTDRTKASIIRI 627
>dbj|BAK05466.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 625
Score = 304 bits (779), Expect = 2e-80
Identities = 148/222 (66%), Positives = 178/222 (80%), Gaps = 2/222 (0%)
Frame = +3
Query: 3 DSDHPEIKKGTVDREFDEIFRVEIIQKLEDYAKYMGSAAHVILLPSIRDAHHDFVFPQPA 182
DSDHPEIKKGT D+ F +IFR EI++KL+D+ +Y+G VIL+PS+RDAHHD VFPQPA
Sbjct: 404 DSDHPEIKKGTSDQSFHDIFRFEILRKLQDFTQYLGYNVRVILVPSVRDAHHDTVFPQPA 463
Query: 183 FDIHLTDDIKPQITCLPNPGFFSANEIAIGCCTVDILKQLSGEEISRIPIDTVSGDRMAR 362
FD+HL +DI QITCL NP FS+NEI GCCTVDILKQLSG+EISR P + DR+ R
Sbjct: 464 FDLHLPEDITQQITCLSNPSLFSSNEIQFGCCTVDILKQLSGDEISRKPPGGKAADRIGR 523
Query: 363 LATHILRQQSFYPLHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKFSHKGSDG 542
LATHI++QQS+YPL+PPA GVP+DFSLA EALEIP PDVL+LPSDLAP VK D
Sbjct: 524 LATHIVKQQSYYPLYPPAAGVPMDFSLAKEALEIPSAPDVLLLPSDLAPSVKVLSVNEDT 583
Query: 543 EVE--CLCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 662
E + +C+NPGRLAKGIGGGTFVEL+YN +++ TKA I+RI
Sbjct: 584 EEQKRFICVNPGRLAKGIGGGTFVELYYNEDTEKTKAFIMRI 625
>ref|XP_002438164.1| hypothetical protein SORBIDRAFT_10g009040 [Sorghum bicolor]
gi|241916387|gb|EER89531.1| hypothetical protein
SORBIDRAFT_10g009040 [Sorghum bicolor]
Length = 626
Score = 302 bits (773), Expect = 1e-79
Identities = 148/222 (66%), Positives = 177/222 (79%), Gaps = 2/222 (0%)
Frame = +3
Query: 3 DSDHPEIKKGTVDREFDEIFRVEIIQKLEDYAKYMGSAAHVILLPSIRDAHHDFVFPQPA 182
DSDHP+IKKGTVD+ F +IF EI++K++D+ +Y+G+ VIL+PS+RDAHHDFVFPQPA
Sbjct: 405 DSDHPDIKKGTVDQSFHDIFHFEILRKIQDFTQYLGNTVRVILIPSVRDAHHDFVFPQPA 464
Query: 183 FDIHLTDDIKPQITCLPNPGFFSANEIAIGCCTVDILKQLSGEEISRIPIDTVSGDRMAR 362
FD++ +DI QITCL NP FS+NEI GCCTVDILKQLSGEEISR P DR+ R
Sbjct: 465 FDLNFPEDITHQITCLANPCLFSSNEIHFGCCTVDILKQLSGEEISRKPPVGKPADRIGR 524
Query: 363 LATHILRQQSFYPLHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKFSH--KGS 536
LA+HIL+QQS+YPL+P A GVP+DFSLA EALEI PDVL+LPSDLAPFVK +GS
Sbjct: 525 LASHILKQQSYYPLYPSAAGVPLDFSLAKEALEISSAPDVLLLPSDLAPFVKVLSLGEGS 584
Query: 537 DGEVECLCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 662
D + +C+NPGRLAKGIGGGTFVEL+YN D T ASIIRI
Sbjct: 585 DDQKRFICVNPGRLAKGIGGGTFVELYYNEGIDKTNASIIRI 626
>gb|AFW56457.1| hypothetical protein ZEAMMB73_686460 [Zea mays]
Length = 551
Score = 300 bits (768), Expect = 4e-79
Identities = 145/222 (65%), Positives = 177/222 (79%), Gaps = 2/222 (0%)
Frame = +3
Query: 3 DSDHPEIKKGTVDREFDEIFRVEIIQKLEDYAKYMGSAAHVILLPSIRDAHHDFVFPQPA 182
DSDHP+IKKGT+D+ F +IF E+++K++D+ +Y+G+ VIL+PS+RDAHHDFVFPQPA
Sbjct: 330 DSDHPDIKKGTIDQSFHDIFHFEVLRKIQDFTQYLGNTVRVILIPSVRDAHHDFVFPQPA 389
Query: 183 FDIHLTDDIKPQITCLPNPGFFSANEIAIGCCTVDILKQLSGEEISRIPIDTVSGDRMAR 362
FD++L +D QIT L NP F +NEI GCCTVDILKQLSG+EISR P GDR+ R
Sbjct: 390 FDLNLLEDTTHQITSLANPCLFGSNEINFGCCTVDILKQLSGQEISRKPPGGKPGDRIGR 449
Query: 363 LATHILRQQSFYPLHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKFSH--KGS 536
LA+HIL+QQS+YPL+PPA GVP+D SLA EALEIP PDVL+LPSDLAPFVK +GS
Sbjct: 450 LASHILKQQSYYPLYPPAPGVPLDLSLAKEALEIPSAPDVLLLPSDLAPFVKVLSLGEGS 509
Query: 537 DGEVECLCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 662
D + +C+NPGRLAKGIGGGTFVEL+YN D T ASIIRI
Sbjct: 510 DDDRRFICVNPGRLAKGIGGGTFVELYYNEGIDKTNASIIRI 551
>ref|NP_001130410.1| uncharacterized protein LOC100191506 [Zea mays]
gi|194689050|gb|ACF78609.1| unknown [Zea mays]
gi|413916526|gb|AFW56458.1| hypothetical protein
ZEAMMB73_686460 [Zea mays]
Length = 626
Score = 300 bits (768), Expect = 4e-79
Identities = 145/222 (65%), Positives = 177/222 (79%), Gaps = 2/222 (0%)
Frame = +3
Query: 3 DSDHPEIKKGTVDREFDEIFRVEIIQKLEDYAKYMGSAAHVILLPSIRDAHHDFVFPQPA 182
DSDHP+IKKGT+D+ F +IF E+++K++D+ +Y+G+ VIL+PS+RDAHHDFVFPQPA
Sbjct: 405 DSDHPDIKKGTIDQSFHDIFHFEVLRKIQDFTQYLGNTVRVILIPSVRDAHHDFVFPQPA 464
Query: 183 FDIHLTDDIKPQITCLPNPGFFSANEIAIGCCTVDILKQLSGEEISRIPIDTVSGDRMAR 362
FD++L +D QIT L NP F +NEI GCCTVDILKQLSG+EISR P GDR+ R
Sbjct: 465 FDLNLLEDTTHQITSLANPCLFGSNEINFGCCTVDILKQLSGQEISRKPPGGKPGDRIGR 524
Query: 363 LATHILRQQSFYPLHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKFSH--KGS 536
LA+HIL+QQS+YPL+PPA GVP+D SLA EALEIP PDVL+LPSDLAPFVK +GS
Sbjct: 525 LASHILKQQSYYPLYPPAPGVPLDLSLAKEALEIPSAPDVLLLPSDLAPFVKVLSLGEGS 584
Query: 537 DGEVECLCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 662
D + +C+NPGRLAKGIGGGTFVEL+YN D T ASIIRI
Sbjct: 585 DDDRRFICVNPGRLAKGIGGGTFVELYYNEGIDKTNASIIRI 626
>gb|EEE53009.1| hypothetical protein OsJ_35699 [Oryza sativa Japonica Group]
Length = 625
Score = 296 bits (757), Expect = 7e-78
Identities = 144/222 (64%), Positives = 173/222 (77%), Gaps = 2/222 (0%)
Frame = +3
Query: 3 DSDHPEIKKGTVDREFDEIFRVEIIQKLEDYAKYMGSAAHVILLPSIRDAHHDFVFPQPA 182
DSDHPEIKKG VD+ F +IF EI++KL+D+ +Y+G VIL+PS+RDAHHDFVFPQPA
Sbjct: 404 DSDHPEIKKGAVDKSFQDIFLFEILRKLQDFTQYLGHNVRVILIPSVRDAHHDFVFPQPA 463
Query: 183 FDIHLTDDIKPQITCLPNPGFFSANEIAIGCCTVDILKQLSGEEISRIPIDTVSGDRMAR 362
FD++L +DI QITCL NP FS NEI GCCT+DILK LSGEEISR P GDR+ R
Sbjct: 464 FDLNLPEDITHQITCLANPSLFSCNEIHFGCCTMDILKHLSGEEISRKPPGEKHGDRIGR 523
Query: 363 LATHILRQQSFYPLHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKF--SHKGS 536
+ THIL+QQS+YPL+PP GVP+DFSLA ALEI PDVL+LPSDLAPFVK + S
Sbjct: 524 ICTHILKQQSYYPLYPPPAGVPLDFSLANGALEIASAPDVLLLPSDLAPFVKVLSLDESS 583
Query: 537 DGEVECLCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 662
+ +C+NPGRLAKGIGGGTFVEL+YN ++D T AS+IRI
Sbjct: 584 EEPKRFICMNPGRLAKGIGGGTFVELNYNEDTDKTSASLIRI 625
>ref|NP_001066483.1| Os12g0242900 [Oryza sativa Japonica Group]
gi|113648990|dbj|BAF29502.1| Os12g0242900, partial
[Oryza sativa Japonica Group]
Length = 400
Score = 296 bits (757), Expect = 7e-78
Identities = 144/222 (64%), Positives = 173/222 (77%), Gaps = 2/222 (0%)
Frame = +3
Query: 3 DSDHPEIKKGTVDREFDEIFRVEIIQKLEDYAKYMGSAAHVILLPSIRDAHHDFVFPQPA 182
DSDHPEIKKG VD+ F +IF EI++KL+D+ +Y+G VIL+PS+RDAHHDFVFPQPA
Sbjct: 179 DSDHPEIKKGAVDKSFQDIFLFEILRKLQDFTQYLGHNVRVILIPSVRDAHHDFVFPQPA 238
Query: 183 FDIHLTDDIKPQITCLPNPGFFSANEIAIGCCTVDILKQLSGEEISRIPIDTVSGDRMAR 362
FD++L +DI QITCL NP FS NEI GCCT+DILK LSGEEISR P GDR+ R
Sbjct: 239 FDLNLPEDITHQITCLANPSLFSCNEIHFGCCTMDILKHLSGEEISRKPPGEKHGDRIGR 298
Query: 363 LATHILRQQSFYPLHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKF--SHKGS 536
+ THIL+QQS+YPL+PP GVP+DFSLA ALEI PDVL+LPSDLAPFVK + S
Sbjct: 299 ICTHILKQQSYYPLYPPPAGVPLDFSLANGALEIASAPDVLLLPSDLAPFVKVLSLDESS 358
Query: 537 DGEVECLCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 662
+ +C+NPGRLAKGIGGGTFVEL+YN ++D T AS+IRI
Sbjct: 359 EEPKRFICMNPGRLAKGIGGGTFVELNYNEDTDKTSASLIRI 400
>gb|ABG21942.1| DNA polymerase alpha subunit B family protein, expressed [Oryza
sativa Japonica Group]
Length = 339
Score = 296 bits (757), Expect = 7e-78
Identities = 144/222 (64%), Positives = 173/222 (77%), Gaps = 2/222 (0%)
Frame = +3
Query: 3 DSDHPEIKKGTVDREFDEIFRVEIIQKLEDYAKYMGSAAHVILLPSIRDAHHDFVFPQPA 182
DSDHPEIKKG VD+ F +IF EI++KL+D+ +Y+G VIL+PS+RDAHHDFVFPQPA
Sbjct: 118 DSDHPEIKKGAVDKSFQDIFLFEILRKLQDFTQYLGHNVRVILIPSVRDAHHDFVFPQPA 177
Query: 183 FDIHLTDDIKPQITCLPNPGFFSANEIAIGCCTVDILKQLSGEEISRIPIDTVSGDRMAR 362
FD++L +DI QITCL NP FS NEI GCCT+DILK LSGEEISR P GDR+ R
Sbjct: 178 FDLNLPEDITHQITCLANPSLFSCNEIHFGCCTMDILKHLSGEEISRKPPGEKHGDRIGR 237
Query: 363 LATHILRQQSFYPLHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKF--SHKGS 536
+ THIL+QQS+YPL+PP GVP+DFSLA ALEI PDVL+LPSDLAPFVK + S
Sbjct: 238 ICTHILKQQSYYPLYPPPAGVPLDFSLANGALEIASAPDVLLLPSDLAPFVKVLSLDESS 297
Query: 537 DGEVECLCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 662
+ +C+NPGRLAKGIGGGTFVEL+YN ++D T AS+IRI
Sbjct: 298 EEPKRFICMNPGRLAKGIGGGTFVELNYNEDTDKTSASLIRI 339
>gb|ABA97199.2| DNA polymerase alpha subunit B family protein, expressed [Oryza
sativa Japonica Group] gi|215693905|dbj|BAG89104.1|
unnamed protein product [Oryza sativa Japonica Group]
Length = 368
Score = 296 bits (757), Expect = 7e-78
Identities = 144/222 (64%), Positives = 173/222 (77%), Gaps = 2/222 (0%)
Frame = +3
Query: 3 DSDHPEIKKGTVDREFDEIFRVEIIQKLEDYAKYMGSAAHVILLPSIRDAHHDFVFPQPA 182
DSDHPEIKKG VD+ F +IF EI++KL+D+ +Y+G VIL+PS+RDAHHDFVFPQPA
Sbjct: 147 DSDHPEIKKGAVDKSFQDIFLFEILRKLQDFTQYLGHNVRVILIPSVRDAHHDFVFPQPA 206
Query: 183 FDIHLTDDIKPQITCLPNPGFFSANEIAIGCCTVDILKQLSGEEISRIPIDTVSGDRMAR 362
FD++L +DI QITCL NP FS NEI GCCT+DILK LSGEEISR P GDR+ R
Sbjct: 207 FDLNLPEDITHQITCLANPSLFSCNEIHFGCCTMDILKHLSGEEISRKPPGEKHGDRIGR 266
Query: 363 LATHILRQQSFYPLHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKF--SHKGS 536
+ THIL+QQS+YPL+PP GVP+DFSLA ALEI PDVL+LPSDLAPFVK + S
Sbjct: 267 ICTHILKQQSYYPLYPPPAGVPLDFSLANGALEIASAPDVLLLPSDLAPFVKVLSLDESS 326
Query: 537 DGEVECLCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 662
+ +C+NPGRLAKGIGGGTFVEL+YN ++D T AS+IRI
Sbjct: 327 EEPKRFICMNPGRLAKGIGGGTFVELNYNEDTDKTSASLIRI 368
>gb|EEC69071.1| hypothetical protein OsI_37935 [Oryza sativa Indica Group]
Length = 625
Score = 295 bits (756), Expect = 9e-78
Identities = 144/222 (64%), Positives = 173/222 (77%), Gaps = 2/222 (0%)
Frame = +3
Query: 3 DSDHPEIKKGTVDREFDEIFRVEIIQKLEDYAKYMGSAAHVILLPSIRDAHHDFVFPQPA 182
DSDHPEIKKG VD+ F +IF EI++KL+D+ +Y+G VIL+PS+RDAHHDFVFPQPA
Sbjct: 404 DSDHPEIKKGAVDQSFQDIFLFEILRKLQDFTQYLGHNVRVILIPSVRDAHHDFVFPQPA 463
Query: 183 FDIHLTDDIKPQITCLPNPGFFSANEIAIGCCTVDILKQLSGEEISRIPIDTVSGDRMAR 362
FD++L +DI QITCL NP FS NEI GCCT+DILK LSGEEISR P GDR+ R
Sbjct: 464 FDLNLPEDITHQITCLANPSLFSCNEIHFGCCTMDILKHLSGEEISRKPPGEKHGDRIGR 523
Query: 363 LATHILRQQSFYPLHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKF--SHKGS 536
+ THIL+QQS+YPL+PP GVP+DFSLA ALEI PDVL+LPSDLAPFVK + S
Sbjct: 524 ICTHILKQQSYYPLYPPPAGVPLDFSLANGALEIASAPDVLLLPSDLAPFVKVLSLDESS 583
Query: 537 DGEVECLCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 662
+ +C+NPGRLAKGIGGGTFVEL+YN ++D T AS+IRI
Sbjct: 584 EEPKRFICMNPGRLAKGIGGGTFVELNYNEDTDKTSASLIRI 625
>ref|XP_003578733.1| PREDICTED: DNA polymerase alpha subunit B-like [Brachypodium
distachyon]
Length = 625
Score = 295 bits (754), Expect = 2e-77
Identities = 142/222 (63%), Positives = 177/222 (79%), Gaps = 2/222 (0%)
Frame = +3
Query: 3 DSDHPEIKKGTVDREFDEIFRVEIIQKLEDYAKYMGSAAHVILLPSIRDAHHDFVFPQPA 182
DSDHP+IK+GTVD+ F +IF EI++KL+D+ +Y+G + VIL+PS+RDAHHD VFPQPA
Sbjct: 404 DSDHPDIKRGTVDQSFHDIFHFEILRKLQDFTQYLGHSVRVILVPSVRDAHHDTVFPQPA 463
Query: 183 FDIHLTDDIKPQITCLPNPGFFSANEIAIGCCTVDILKQLSGEEISRIPIDTVSGDRMAR 362
FD++L +DI QITCL NP FS+NEI GCCT DILKQLSG+EISR P DR+ R
Sbjct: 464 FDLNLPEDITHQITCLANPSIFSSNEIHFGCCTTDILKQLSGDEISRKPPGGKPADRIGR 523
Query: 363 LATHILRQQSFYPLHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKF--SHKGS 536
LA HIL+QQS+YPL+PPA GVP+DFSLA EA EI PDVL+LPSDLAPFVK ++G+
Sbjct: 524 LAKHILKQQSYYPLYPPAAGVPMDFSLAKEAFEISSPPDVLLLPSDLAPFVKVLSLNEGA 583
Query: 537 DGEVECLCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 662
+ + +C+NPGRLAKGIGGGTFVEL+YN ++D T A I+RI
Sbjct: 584 EEQKWFVCVNPGRLAKGIGGGTFVELYYNEDTDKTNAFIMRI 625
>ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
gi|297738371|emb|CBI27572.3| unnamed protein product
[Vitis vinifera]
Length = 623
Score = 295 bits (754), Expect = 2e-77
Identities = 148/224 (66%), Positives = 174/224 (77%), Gaps = 4/224 (1%)
Frame = +3
Query: 3 DSDHPEIKKGTVDREFDEIFRVEIIQKLEDYAKYMGSAAHVILLPSIRDAHHDFVFPQPA 182
DS+HPEI+KGTVDR FDEIF +EI+++L+DY +YMGSAA VIL+PSIRDA+HDFVFPQPA
Sbjct: 401 DSEHPEIRKGTVDRSFDEIFHLEILRRLQDYVEYMGSAARVILVPSIRDANHDFVFPQPA 460
Query: 183 FDIHLTDDIKPQITCLPNPGFFSANEIAIGCCTVDILKQLSGEEISRIPIDTVSGDRMAR 362
F IH D+K QIT L NPG F ANE+ +GCCTVD++KQLSGE ISR P D S DRM
Sbjct: 461 FSIH-PPDLKHQITSLTNPGMFDANEVKVGCCTVDVIKQLSGEMISRNPTDGSSRDRMTT 519
Query: 363 LATHILRQQSFYPLHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKFSHKGSDG 542
+A HIL Q+SFYPL+P A G+P+DFSLA EALE+ PDVLILPSDLA FVK G
Sbjct: 520 IANHILSQRSFYPLYPLAEGIPLDFSLAPEALEVSTIPDVLILPSDLASFVKVLSLGGRN 579
Query: 543 E----VECLCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 662
E V+C+C+NPGRLAKG GGG FVEL+Y D T AS+IRI
Sbjct: 580 EGEELVKCICVNPGRLAKGEGGGHFVELNYQGSPDKTSASVIRI 623
>ref|XP_006663930.1| PREDICTED: DNA polymerase alpha subunit B-like [Oryza brachyantha]
Length = 410
Score = 294 bits (753), Expect = 2e-77
Identities = 143/222 (64%), Positives = 173/222 (77%), Gaps = 2/222 (0%)
Frame = +3
Query: 3 DSDHPEIKKGTVDREFDEIFRVEIIQKLEDYAKYMGSAAHVILLPSIRDAHHDFVFPQPA 182
DSDHPEIKKGTVD+ F +IF EI++K++D+ +Y+G VIL+PS+RDAHHDFVFPQPA
Sbjct: 189 DSDHPEIKKGTVDQSFQDIFLFEIMRKIQDFTQYLGHNVRVILVPSVRDAHHDFVFPQPA 248
Query: 183 FDIHLTDDIKPQITCLPNPGFFSANEIAIGCCTVDILKQLSGEEISRIPIDTVSGDRMAR 362
FD++L +DI QI+CL NP FS NEI GCCT+DILK LSGEEISR P GDR+ R
Sbjct: 249 FDLNLPEDITHQISCLANPSLFSCNEIQFGCCTMDILKHLSGEEISRKPPGGKPGDRIGR 308
Query: 363 LATHILRQQSFYPLHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKF--SHKGS 536
+ HIL+QQS+YPL+PP GVP+DFSLA ALEI PDVL+LPSDLAPFVK + S
Sbjct: 309 ICAHILKQQSYYPLYPPPAGVPLDFSLASGALEISSAPDVLLLPSDLAPFVKVLSLDESS 368
Query: 537 DGEVECLCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 662
+ +C+NPGRLAKGIGGGTFVEL+YN ++D T ASIIRI
Sbjct: 369 EEPKHFICVNPGRLAKGIGGGTFVELNYNEDTDKTSASIIRI 410
>gb|EMT19418.1| DNA polymerase alpha subunit B [Aegilops tauschii]
Length = 594
Score = 293 bits (749), Expect = 6e-77
Identities = 144/222 (64%), Positives = 171/222 (77%), Gaps = 2/222 (0%)
Frame = +3
Query: 3 DSDHPEIKKGTVDREFDEIFRVEIIQKLEDYAKYMGSAAHVILLPSIRDAHHDFVFPQPA 182
DSDHPEIKKGT D+ F +IF EI++KL+D+ +Y+G VIL+PS+RDAHHD VFPQPA
Sbjct: 373 DSDHPEIKKGTSDQSFHDIFHFEILRKLQDFTQYLGHNVRVILVPSVRDAHHDAVFPQPA 432
Query: 183 FDIHLTDDIKPQITCLPNPGFFSANEIAIGCCTVDILKQLSGEEISRIPIDTVSGDRMAR 362
FD HL +DI QITCL NP FS+NEI GCCTVDILKQLSG+EISR P + DR+ R
Sbjct: 433 FDSHLPEDITQQITCLSNPSLFSSNEIQFGCCTVDILKQLSGDEISRKPPGGKAADRIGR 492
Query: 363 LATHILRQQSFYPLHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKFSHKGSDG 542
LATHI S+YPL+PPA GVP+DFSLA EALEIP PDVL+LPSDLAP VK D
Sbjct: 493 LATHISTSYSYYPLYPPAAGVPMDFSLAKEALEIPSAPDVLLLPSDLAPSVKVLSVNEDT 552
Query: 543 E--VECLCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 662
E +C+NPGRL+KGIGGGTFVEL+YN +++ TKA I+RI
Sbjct: 553 EEHKRFICVNPGRLSKGIGGGTFVELYYNEDTEKTKAFIMRI 594
>gb|EMJ25471.1| hypothetical protein PRUPE_ppa018609mg [Prunus persica]
Length = 612
Score = 288 bits (736), Expect = 2e-75
Identities = 143/221 (64%), Positives = 173/221 (78%), Gaps = 1/221 (0%)
Frame = +3
Query: 3 DSDHPEIKKGTVDREFDEIFRVEIIQKLEDYAKYMGSAAHVILLPSIRDAHHDFVFPQPA 182
DS+HPEIKKGTVDR FDEIFR EI+++L+D+ +YMGS A ++L+PSIRDA+HDFVFPQPA
Sbjct: 393 DSEHPEIKKGTVDRSFDEIFRSEILRRLQDHVEYMGSHARIVLVPSIRDANHDFVFPQPA 452
Query: 183 FDIHLTDDIKPQITCLPNPGFFSANEIAIGCCTVDILKQLSGEEISRIPIDTVSGDRMAR 362
FDIH + ++ QIT L NPG F N++ IGCC+VDILK LSGEEISR P D DRM+R
Sbjct: 453 FDIHPAN-LRHQITSLTNPGIFEGNQVKIGCCSVDILKHLSGEEISRNPKDGKLSDRMSR 511
Query: 363 LATHILRQQSFYPLHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKFSHKGSDG 542
LA HI+ Q+SFYPL+PPA G+P+DFSLA EAL I PD+LILPSD+ FVK G +
Sbjct: 512 LANHIISQRSFYPLYPPAEGIPLDFSLAPEALNISLIPDILILPSDMKHFVKVKWSGEEK 571
Query: 543 E-VECLCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 662
E V+C+C+NPGRLAKG GGGTFVEL+Y D ASII I
Sbjct: 572 EQVKCICVNPGRLAKGEGGGTFVELNYYGNPDTCNASIIGI 612
>ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-like [Fragaria vesca subsp.
vesca]
Length = 620
Score = 284 bits (727), Expect = 2e-74
Identities = 145/222 (65%), Positives = 173/222 (77%), Gaps = 2/222 (0%)
Frame = +3
Query: 3 DSDHPEIKKGTVDREFDEIFRVEIIQKLEDYAKYMGSAAHVILLPSIRDAHHDFVFPQPA 182
DS+HPEIKKG VDR FD+IF+ EI+++L+DYA+YMGS A V+L+PS+RDA+HDFVFPQP
Sbjct: 401 DSEHPEIKKGNVDRTFDDIFQFEILRRLQDYAEYMGSHARVVLVPSVRDANHDFVFPQPP 460
Query: 183 FDIHLTDDIKPQITCLPNPGFFSANEIAIGCCTVDILKQLSGEEISRIPIDTVSGDRMAR 362
FDIH D+K QIT L NPG AN++ IGCC+VDILK LSGEE SR P D S DRM+R
Sbjct: 461 FDIH-PPDLKHQITSLTNPGMLEANQVKIGCCSVDILKHLSGEETSRFPKDGTSRDRMSR 519
Query: 363 LATHILRQQSFYPLHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKFSHKGSDG 542
LA HIL Q+SFYPL+PPA VP+DFSLA EAL I PD+LILPSDL FVK G +G
Sbjct: 520 LANHILGQRSFYPLYPPAESVPLDFSLAPEALNISLIPDILILPSDLKYFVKVLSLG-EG 578
Query: 543 E--VECLCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 662
E V+C+C+NPGRL+KG GGGTFVEL+Y D + ASII I
Sbjct: 579 EPPVKCICVNPGRLSKGEGGGTFVELNYYGSPDTSNASIIGI 620
>ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum lycopersicum]
Length = 617
Score = 280 bits (715), Expect = 5e-73
Identities = 141/223 (63%), Positives = 174/223 (78%), Gaps = 3/223 (1%)
Frame = +3
Query: 3 DSDHPEIKKGTVDREFDEIFRVEIIQKLEDYAKYMGSAAHVILLPSIRDAHHDFVFPQPA 182
DSDHPEIKKGTVDR FDEIF+ EI+ +L DY +YMGSAA V+L+PS+RDA HDFV+PQPA
Sbjct: 397 DSDHPEIKKGTVDRTFDEIFQDEILARLRDYVEYMGSAARVVLVPSVRDASHDFVYPQPA 456
Query: 183 FDIHLTDDIKPQITCLPNPGFFSANEIAIGCCTVDILKQLSGEEISRIPIDTVSGDRMAR 362
FDI L D++ QI + NPG F ANE+ + CCTVD+LKQLS EEISR P S RM
Sbjct: 457 FDIQL-PDLEHQINSITNPGIFCANEVKVACCTVDVLKQLSAEEISRNP-QGGSKQRMTT 514
Query: 363 LATHILRQQSFYPLHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKFSHKG--S 536
LA HIL Q+SFYPL+PPA GVP+DFSLA EAL++ +PD+LILPSDLA FV+ G S
Sbjct: 515 LANHILNQRSFYPLYPPAEGVPIDFSLAPEALQMSTDPDILILPSDLAHFVRVVSLGERS 574
Query: 537 DG-EVECLCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 662
+G EV+C+C+NPGRL++G GGG FVEL+Y+ D + AS++RI
Sbjct: 575 EGEEVKCICVNPGRLSRGEGGGFFVELNYHGSCDSSSASVLRI 617
>ref|XP_003601821.1| DNA polymerase alpha subunit B [Medicago truncatula]
gi|355490869|gb|AES72072.1| DNA polymerase alpha subunit
B [Medicago truncatula]
Length = 616
Score = 279 bits (713), Expect = 9e-73
Identities = 141/222 (63%), Positives = 173/222 (77%), Gaps = 2/222 (0%)
Frame = +3
Query: 3 DSDHPEIKKGTVDREFDEIFRVEIIQKLEDYAKYMGSAAHVILLPSIRDAHHDFVFPQPA 182
DS+HP+IKKGTVDR+FDEIFR+E+++KLEDY + MGSA V+L+PSIRDA+HDFVFPQPA
Sbjct: 398 DSEHPDIKKGTVDRDFDEIFRLEVLRKLEDYVESMGSAVRVLLVPSIRDANHDFVFPQPA 457
Query: 183 FDIHLTDDIKPQITCLPNPGFFSANEIAIGCCTVDILKQLSGEEISRIPIDTVSGDRMAR 362
FDI + QI L NPG F ANE+ +GCCT+D+LKQ+SGEEISRI D DR++R
Sbjct: 458 FDI---SQPQLQIASLTNPGIFEANEVKVGCCTLDVLKQISGEEISRISADRKPIDRLSR 514
Query: 363 LATHILRQQSFYPLHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVK-FSHKGSD 539
LA HIL QQSFYPL+PPA VP+DFSLA EAL++P PDVLILPSDL FVK ++G +
Sbjct: 515 LANHILNQQSFYPLYPPAESVPLDFSLAPEALQLPLVPDVLILPSDLKYFVKVLDNEGEE 574
Query: 540 -GEVECLCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 662
++C+ +NPGRLAKG GGGTFVEL Y+ D ASI+ I
Sbjct: 575 TNRMKCIAVNPGRLAKGEGGGTFVELDYSGGLDKINASILAI 616
>gb|ESW35722.1| hypothetical protein PHAVU_001G259300g [Phaseolus vulgaris]
Length = 625
Score = 278 bits (712), Expect = 1e-72
Identities = 139/224 (62%), Positives = 169/224 (75%), Gaps = 4/224 (1%)
Frame = +3
Query: 3 DSDHPEIKKGTVDREFDEIFRVEIIQKLEDYAKYMGSAAHVILLPSIRDAHHDFVFPQPA 182
DS+HP++KKGTVDR FDEIF EI++KLEDY +++GS V+L+PSIRDA+HDFVFPQPA
Sbjct: 403 DSEHPDLKKGTVDRTFDEIFHFEILRKLEDYVEHVGSGTRVLLVPSIRDANHDFVFPQPA 462
Query: 183 FDIHLTDDIKPQITCLPNPGFFSANEIAIGCCTVDILKQLSGEEISRIPIDTVSGDRMAR 362
+I+L+D K QI L NPG F ANE+ +GCCTVD++KQ SGEEISR D DRM+R
Sbjct: 463 LEINLSD-FKSQIVSLANPGIFEANEVKVGCCTVDVIKQTSGEEISRTAADGKPIDRMSR 521
Query: 363 LATHILRQQSFYPLHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKFSHKGSDG 542
LA HIL QQSFYPL+PPA VP+DFSLA EAL++ PD+LILPSD+ FVK S+G
Sbjct: 522 LANHILNQQSFYPLYPPAESVPLDFSLAPEALQLSLVPDILILPSDIKYFVKMLSSESEG 581
Query: 543 ----EVECLCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 662
+C+ +NPGRLAKG GGGTFVELHY SD ASI+ I
Sbjct: 582 INNSNSKCIAVNPGRLAKGEGGGTFVELHYGGGSDQINASIVGI 625
>ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum tuberosum]
Length = 617
Score = 276 bits (707), Expect = 4e-72
Identities = 140/223 (62%), Positives = 173/223 (77%), Gaps = 3/223 (1%)
Frame = +3
Query: 3 DSDHPEIKKGTVDREFDEIFRVEIIQKLEDYAKYMGSAAHVILLPSIRDAHHDFVFPQPA 182
DSDHPEIKKGTVDR FDEIF+ EI+ +L DY +YMGSAA VIL+PS+RDA HDFV+PQPA
Sbjct: 397 DSDHPEIKKGTVDRTFDEIFQDEILARLRDYVEYMGSAARVILVPSVRDASHDFVYPQPA 456
Query: 183 FDIHLTDDIKPQITCLPNPGFFSANEIAIGCCTVDILKQLSGEEISRIPIDTVSGDRMAR 362
FDI + D++ QI + NPG F ANE+ + CCTVD+LKQLS EEISR P S RM
Sbjct: 457 FDIQ-SPDLEHQINSITNPGIFCANEVKVACCTVDVLKQLSAEEISRNP-QGGSKQRMTT 514
Query: 363 LATHILRQQSFYPLHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKFSHKG--S 536
LA HIL Q+SFYPL+PPA GVP+DFSLA EAL++ PD+LILPSDLA FV+ G S
Sbjct: 515 LANHILNQRSFYPLYPPAEGVPIDFSLAPEALQMSTAPDILILPSDLAHFVRVISLGERS 574
Query: 537 DG-EVECLCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 662
+G EV+C+C+NPGRL++G GGG F+EL+Y+ D + AS++RI
Sbjct: 575 EGEEVKCICVNPGRLSRGEGGGFFMELNYHGSCDSSSASVLRI 617