BLASTX nr result

ID: Zingiber25_contig00038633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00038633
         (288 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_174228.1| U-box domain-containing protein 17 [Arabidopsis...    61   1e-07
gb|AAL36401.1| putative arm repeat-containing protein [Arabidops...    61   1e-07
ref|XP_006306891.1| hypothetical protein CARUB_v10008444mg [Caps...    60   2e-07
ref|XP_002890808.1| plant U-box17 [Arabidopsis lyrata subsp. lyr...    60   3e-07
ref|XP_006415583.1| hypothetical protein EUTSA_v10006853mg [Eutr...    59   7e-07
dbj|BAJ34586.1| unnamed protein product [Thellungiella halophila]      59   7e-07

>ref|NP_174228.1| U-box domain-containing protein 17 [Arabidopsis thaliana]
           gi|75268254|sp|Q9C7R6.1|PUB17_ARATH RecName: Full=U-box
           domain-containing protein 17; AltName: Full=Plant U-box
           protein 17 gi|12323514|gb|AAG51726.1|AC068667_5 arm
           repeat-containing protein, putative; 6839-9028
           [Arabidopsis thaliana] gi|23297797|gb|AAN13028.1|
           putative arm repeat-containing protein [Arabidopsis
           thaliana] gi|332192953|gb|AEE31074.1| U-box
           domain-containing protein 17 [Arabidopsis thaliana]
          Length = 729

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 34/66 (51%), Positives = 41/66 (62%)
 Frame = +2

Query: 86  MTSPFAFLSVRRRRFPLAGAFFAPGGLSGAALIHALAALCSDVVAAAGRCNFRFQRYNAR 265
           M S   F S+RRRR P   AF AP  LSG AL+  LA++ S+VV+      F FQR NAR
Sbjct: 1   MASAAIFSSLRRRRSPSLEAFLAPVDLSGVALVQTLASISSEVVSCFTSVRFSFQRKNAR 60

Query: 266 SLVLKI 283
           SL+ KI
Sbjct: 61  SLIRKI 66


>gb|AAL36401.1| putative arm repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 34/66 (51%), Positives = 41/66 (62%)
 Frame = +2

Query: 86  MTSPFAFLSVRRRRFPLAGAFFAPGGLSGAALIHALAALCSDVVAAAGRCNFRFQRYNAR 265
           M S   F S+RRRR P   AF AP  LSG AL+  LA++ S+VV+      F FQR NAR
Sbjct: 1   MASAAIFSSLRRRRSPSLEAFLAPVDLSGVALVQTLASISSEVVSCFTSVRFSFQRKNAR 60

Query: 266 SLVLKI 283
           SL+ KI
Sbjct: 61  SLIRKI 66


>ref|XP_006306891.1| hypothetical protein CARUB_v10008444mg [Capsella rubella]
           gi|482575602|gb|EOA39789.1| hypothetical protein
           CARUB_v10008444mg [Capsella rubella]
          Length = 720

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 33/66 (50%), Positives = 41/66 (62%)
 Frame = +2

Query: 86  MTSPFAFLSVRRRRFPLAGAFFAPGGLSGAALIHALAALCSDVVAAAGRCNFRFQRYNAR 265
           M S   F S+RRRR P   AF AP  LSG AL+  LA++ ++VV+      F FQR NAR
Sbjct: 1   MASAAIFSSLRRRRSPSLEAFLAPVDLSGVALVQTLASISTEVVSCFSGVRFSFQRKNAR 60

Query: 266 SLVLKI 283
           SL+ KI
Sbjct: 61  SLIRKI 66


>ref|XP_002890808.1| plant U-box17 [Arabidopsis lyrata subsp. lyrata]
           gi|297336650|gb|EFH67067.1| plant U-box17 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 722

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 33/66 (50%), Positives = 41/66 (62%)
 Frame = +2

Query: 86  MTSPFAFLSVRRRRFPLAGAFFAPGGLSGAALIHALAALCSDVVAAAGRCNFRFQRYNAR 265
           M S   F S+RRRR P   AF AP  LSG AL+  LA++ ++VV+      F FQR NAR
Sbjct: 1   MASAAIFSSLRRRRSPSLEAFLAPVDLSGVALVQTLASISTEVVSCFTSVRFSFQRKNAR 60

Query: 266 SLVLKI 283
           SL+ KI
Sbjct: 61  SLIRKI 66


>ref|XP_006415583.1| hypothetical protein EUTSA_v10006853mg [Eutrema salsugineum]
           gi|557093354|gb|ESQ33936.1| hypothetical protein
           EUTSA_v10006853mg [Eutrema salsugineum]
          Length = 783

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 31/66 (46%), Positives = 41/66 (62%)
 Frame = +2

Query: 86  MTSPFAFLSVRRRRFPLAGAFFAPGGLSGAALIHALAALCSDVVAAAGRCNFRFQRYNAR 265
           M +   F S+RRRR P   AF AP  LSG AL+  LA++ +++V+      F FQR NAR
Sbjct: 1   MATAAIFSSLRRRRSPSLEAFLAPVDLSGVALVQTLASISTEIVSCFSGVRFSFQRRNAR 60

Query: 266 SLVLKI 283
           SL+ KI
Sbjct: 61  SLIRKI 66


>dbj|BAJ34586.1| unnamed protein product [Thellungiella halophila]
          Length = 724

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 31/66 (46%), Positives = 41/66 (62%)
 Frame = +2

Query: 86  MTSPFAFLSVRRRRFPLAGAFFAPGGLSGAALIHALAALCSDVVAAAGRCNFRFQRYNAR 265
           M +   F S+RRRR P   AF AP  LSG AL+  LA++ +++V+      F FQR NAR
Sbjct: 1   MATAAIFSSLRRRRSPSLEAFLAPVDLSGVALVQTLASISTEIVSCFSGVRFSFQRRNAR 60

Query: 266 SLVLKI 283
           SL+ KI
Sbjct: 61  SLIRKI 66


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