BLASTX nr result
ID: Zingiber25_contig00038598
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Zingiber25_contig00038598 (860 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002916057.1| polyprotein [Sweetpotato badnavirus B] gi|23... 96 1e-36 ref|YP_004581513.1| RNaseH/reverse transcriptase [Sweetpotato ba... 90 5e-34 ref|YP_006273075.1| polyprotein [Fig badnavirus 1] gi|333493962|... 122 2e-25 emb|CAA64274.1| unnamed protein product [Dioscorea bacilliform v... 118 3e-24 ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]... 117 4e-24 ref|NP_569153.1| poplyprotein [Citrus yellow mosaic virus] gi|16... 117 4e-24 emb|CAA64701.1| polyprotein [Dioscorea bacilliform virus] 117 5e-24 gb|AER00544.1| ORF III [Citrus yellow mosaic virus] 117 5e-24 gb|AER00538.1| ORF III [Citrus yellow mosaic virus] 117 5e-24 gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus] 117 5e-24 gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus] 117 5e-24 gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus] 117 5e-24 gb|AHG94942.1| ORF3, partial [Dioscorea bacilliform virus] 117 7e-24 gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus] 117 7e-24 emb|CAA64703.1| polyprotein [Dioscorea bacilliform virus] 116 9e-24 emb|CAA64275.1| unnamed protein product [Dioscorea bacilliform v... 116 1e-23 gb|ADN96018.1| polyprotein [Pineapple bacilliform comosus virus] 115 3e-23 gb|AAW30012.1| polyprotein [Citrus yellow mosaic virus] 115 3e-23 gb|AEV42076.1| putative polyprotein [Pineapple bacilliform comos... 114 3e-23 gb|AHG32726.1| ORF3, partial [Dioscorea rotundata] 114 6e-23 >ref|YP_002916057.1| polyprotein [Sweetpotato badnavirus B] gi|237846580|gb|ACN56751.1| polyprotein [Sweetpotato badnavirus B] Length = 771 Score = 96.3 bits (238), Expect(2) = 1e-36 Identities = 44/72 (61%), Positives = 55/72 (76%) Frame = -3 Query: 855 KDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSIERTTFWVPNGLYEWLVIPF 676 KDQY+LP NTI+ +V+ K++SKFDLKS FHQ+ M +SI T FW P+GLYE+LV+PF Sbjct: 262 KDQYSLPGINTIISRVAGKKVFSKFDLKSGFHQIRMSKESIPWTAFWTPDGLYEFLVMPF 321 Query: 675 GLKNAPAIFNEK 640 GL NAPA F K Sbjct: 322 GLVNAPADFQRK 333 Score = 84.7 bits (208), Expect(2) = 1e-36 Identities = 43/70 (61%), Positives = 51/70 (72%) Frame = -2 Query: 661 PSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPMKMK 482 P++F RKMDN F+GTE FIA+YIDDIL FS E+ + QHL IV+KN LILSP KMK Sbjct: 327 PADFQRKMDNAFRGTEAFIAVYIDDILIFSETEEDHEQHLLKFAQIVEKNGLILSPTKMK 386 Query: 481 IAVPEVEVLG 452 I V V+ LG Sbjct: 387 IGVKSVDFLG 396 Score = 54.7 bits (130), Expect(2) = 2e-12 Identities = 24/37 (64%), Positives = 31/37 (83%) Frame = -3 Query: 444 KELIIRTDC*AIISFFGKTADNKPSWVRRLAFTDYIS 334 KE++IRTDC AI+SFF K+A NKPS R ++FTDYI+ Sbjct: 561 KEMVIRTDCQAIVSFFNKSASNKPSRARWISFTDYIT 597 Score = 44.7 bits (104), Expect(2) = 2e-12 Identities = 22/45 (48%), Positives = 27/45 (60%) Frame = -2 Query: 358 VSFYRLHIGIGNSIHFEHIEGKDNQLADALSWLINCLIVLEWSVK 224 +SF G G I EHI+GKDN LAD LS L+ LI+ EW + Sbjct: 590 ISFTDYITGTGIKIRIEHIDGKDNTLADYLSRLVFSLIIAEWKTQ 634 >ref|YP_004581513.1| RNaseH/reverse transcriptase [Sweetpotato badnavirus A] gi|237846574|gb|ACN56746.1| RNaseH/reverse transcriptase [Sweetpotato badnavirus A] Length = 794 Score = 89.7 bits (221), Expect(2) = 5e-34 Identities = 42/72 (58%), Positives = 51/72 (70%) Frame = -3 Query: 855 KDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSIERTTFWVPNGLYEWLVIPF 676 KDQY+LP NTI+ ++S KI+SKFDLK+ FHQ+ M S T FW P GLYE+ V+PF Sbjct: 286 KDQYSLPGINTIVSRISGKKIFSKFDLKAGFHQIRMEEKSKPWTAFWTPEGLYEFEVMPF 345 Query: 675 GLKNAPAIFNEK 640 GL NAPA F K Sbjct: 346 GLMNAPADFQRK 357 Score = 82.4 bits (202), Expect(2) = 5e-34 Identities = 41/70 (58%), Positives = 52/70 (74%) Frame = -2 Query: 661 PSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPMKMK 482 P++F RKMDN F+GT+ FIA+YIDDIL FS +E+ + HL L IV++ LILSP KMK Sbjct: 351 PADFQRKMDNAFRGTDAFIAVYIDDILVFSENEEEHEDHLLNLAQIVRREGLILSPTKMK 410 Query: 481 IAVPEVEVLG 452 I V EV+ LG Sbjct: 411 IGVKEVDFLG 420 Score = 55.1 bits (131), Expect(2) = 4e-13 Identities = 25/37 (67%), Positives = 31/37 (83%) Frame = -3 Query: 444 KELIIRTDC*AIISFFGKTADNKPSWVRRLAFTDYIS 334 KE+IIRTDC AI+SFF K+A NKPS R ++FTDYI+ Sbjct: 585 KEMIIRTDCEAIVSFFNKSASNKPSRARWISFTDYIT 621 Score = 46.6 bits (109), Expect(2) = 4e-13 Identities = 26/77 (33%), Positives = 42/77 (54%) Frame = -2 Query: 358 VSFYRLHIGIGNSIHFEHIEGKDNQLADALSWLINCLIVLEWSVKILEDLELVAPTLQEL 179 +SF G G I EHI+GKDN LAD LS L+ LI+ EW + L AP + Sbjct: 614 ISFTDYITGTGIKIRIEHIDGKDNILADYLSRLVFSLIIAEWKTQEKSIAPLQAPRITLT 673 Query: 178 QENPNREAKVQMIQALA 128 + + +++ + +++ L+ Sbjct: 674 KXSCSKQQEPLLLRELS 690 >ref|YP_006273075.1| polyprotein [Fig badnavirus 1] gi|333493962|gb|AEF56561.1| polyprotein [Fig badnavirus 1] Length = 1837 Score = 122 bits (306), Expect = 2e-25 Identities = 55/73 (75%), Positives = 63/73 (86%) Frame = -3 Query: 858 NKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSIERTTFWVPNGLYEWLVIP 679 +KDQY+LP NTIL+KV SKI+SKFDLKS FHQV MHPDSIE T FWVP+GLYEWLV+P Sbjct: 1346 HKDQYSLPGINTILKKVGNSKIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLYEWLVMP 1405 Query: 678 FGLKNAPAIFNEK 640 FGLKNAP++F K Sbjct: 1406 FGLKNAPSVFQRK 1418 Score = 95.1 bits (235), Expect = 3e-17 Identities = 46/74 (62%), Positives = 59/74 (79%) Frame = -2 Query: 670 EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 491 + PS F RKMD CFKGTE+FIA+YIDDIL FS +E+ + +HL+ +L+I ++N L+LSP Sbjct: 1409 KNAPSVFQRKMDECFKGTEDFIAVYIDDILVFSENEKDHAKHLKAMLEICKRNGLVLSPS 1468 Query: 490 KMKIAVPEVEVLGA 449 KMKIAV EVE LGA Sbjct: 1469 KMKIAVQEVEFLGA 1482 Score = 56.6 bits (135), Expect(2) = 2e-16 Identities = 32/47 (68%), Positives = 37/47 (78%), Gaps = 1/47 (2%) Frame = -3 Query: 471 QKWKSLELDK-ELIIRTDC*AIISFFGKTADNKPSWVRRLAFTDYIS 334 +K K LDK ELIIRTDC AIISFF K+A NKPS VR +AFTD+I+ Sbjct: 1636 EKLKIYYLDKKELIIRTDCQAIISFFNKSALNKPSRVRWVAFTDFIT 1682 Score = 56.2 bits (134), Expect(2) = 2e-16 Identities = 31/85 (36%), Positives = 51/85 (60%) Frame = -2 Query: 358 VSFYRLHIGIGNSIHFEHIEGKDNQLADALSWLINCLIVLEWSVKILEDLELVAPTLQEL 179 V+F GIG ++ FEHI+G+DN LAD+LS LIN + EWS+K E L++L Sbjct: 1675 VAFTDFITGIGINVEFEHIDGRDNVLADSLSRLINSFFLTEWSLK----KEEAVAELEKL 1730 Query: 178 QENPNREAKVQMIQALATLSSSLNN 104 E +++ + Q++ + +++ NN Sbjct: 1731 ME--DKQCRKQLLPLINKMTNCFNN 1753 >emb|CAA64274.1| unnamed protein product [Dioscorea bacilliform virus] Length = 338 Score = 118 bits (295), Expect = 3e-24 Identities = 55/72 (76%), Positives = 60/72 (83%) Frame = -3 Query: 855 KDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSIERTTFWVPNGLYEWLVIPF 676 KDQY+LP NTIL+KV SKIYSKFDLKS FHQV MHPDSI+ T F VP GLYEWLV+PF Sbjct: 206 KDQYSLPGINTILKKVGNSKIYSKFDLKSGFHQVAMHPDSIQWTAFCVPGGLYEWLVMPF 265 Query: 675 GLKNAPAIFNEK 640 GLKNAPA+F K Sbjct: 266 GLKNAPAVFQRK 277 Score = 81.3 bits (199), Expect = 4e-13 Identities = 38/70 (54%), Positives = 51/70 (72%) Frame = -2 Query: 670 EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 491 + P+ F RKMDNCF+GTE+FIA+YIDDIL FS + + +HL +L I +++ L+LSP Sbjct: 268 KNAPAVFQRKMDNCFRGTEDFIAVYIDDILVFSRTPEEHAEHLLKMLSICKEHGLVLSPR 327 Query: 490 KMKIAVPEVE 461 KMKI P VE Sbjct: 328 KMKIGTPTVE 337 >ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1] gi|584388573|gb|AHI90954.1| polyprotein [Hibiscus bacilliform virus GD1] Length = 1892 Score = 117 bits (294), Expect = 4e-24 Identities = 52/72 (72%), Positives = 62/72 (86%) Frame = -3 Query: 855 KDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSIERTTFWVPNGLYEWLVIPF 676 KDQY+LP NTI+++V +KIYSKFDLKS FHQV MHP+SI+ T FWVP+GLYEWLV+PF Sbjct: 1405 KDQYSLPGINTIMKRVGHAKIYSKFDLKSGFHQVAMHPESIKWTAFWVPDGLYEWLVMPF 1464 Query: 675 GLKNAPAIFNEK 640 GLKNAPA+F K Sbjct: 1465 GLKNAPAVFQRK 1476 Score = 86.3 bits (212), Expect = 1e-14 Identities = 42/74 (56%), Positives = 56/74 (75%) Frame = -2 Query: 670 EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 491 + P+ F RKMDN FKGTE FIA+YIDDIL FS E+ +++H+R +L+ ++N L+LSP Sbjct: 1467 KNAPAVFQRKMDNVFKGTEAFIAVYIDDILVFSQSEEEHIKHIRVMLEKCRENGLVLSPT 1526 Query: 490 KMKIAVPEVEVLGA 449 KMKIA +VE LGA Sbjct: 1527 KMKIAQRKVEFLGA 1540 Score = 43.1 bits (100), Expect(2) = 5e-08 Identities = 22/40 (55%), Positives = 30/40 (75%), Gaps = 1/40 (2%) Frame = -3 Query: 450 LDK-ELIIRTDC*AIISFFGKTADNKPSWVRRLAFTDYIS 334 LDK L IRTDC AII+FF +++KPS +R + FTDY++ Sbjct: 1701 LDKPSLTIRTDCQAIIAFFDTISNHKPSRLRWINFTDYVT 1740 Score = 41.2 bits (95), Expect(2) = 5e-08 Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 5/100 (5%) Frame = -2 Query: 358 VSFYRLHIGIGNSIHFEHIEGKDNQLADALSWLINCLIVLEWSVKILEDLELVAPTLQEL 179 ++F G+G ++F+H++G+DN+LADALS LI+ ++ E + E+ + Q + Sbjct: 1733 INFTDYVTGLGIPVNFQHVKGEDNRLADALSRLIS--VIFEAGQQWQEESTRMQHLTQLI 1790 Query: 178 QENPNREAKVQMIQAL-----ATLSSSLNNINNFCIDSTQ 74 E+ EA + L A ++S++N+ + STQ Sbjct: 1791 GEHYKFEASGKKHHQLKETLTALITSTMNSWTEKSLSSTQ 1830 >ref|NP_569153.1| poplyprotein [Citrus yellow mosaic virus] gi|16416939|gb|AAL18495.1|AF347695_3 unknown [citrus yellow mosaic virus] Length = 1983 Score = 117 bits (294), Expect = 4e-24 Identities = 54/73 (73%), Positives = 61/73 (83%) Frame = -3 Query: 858 NKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSIERTTFWVPNGLYEWLVIP 679 NKDQY+LP TIL+++ S I+SKFDLKS FHQV MHPDSIE T FWVP+GLYEWLV+P Sbjct: 1471 NKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSIEWTAFWVPSGLYEWLVMP 1530 Query: 678 FGLKNAPAIFNEK 640 FGLKNAPAIF K Sbjct: 1531 FGLKNAPAIFQRK 1543 Score = 91.7 bits (226), Expect = 3e-16 Identities = 47/74 (63%), Positives = 56/74 (75%) Frame = -2 Query: 670 EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 491 + P+ F RKMD+CFKGTE FIA+YIDDIL FS EQ + +HL+ +L I QKN LILSP Sbjct: 1534 KNAPAIFQRKMDHCFKGTEAFIAVYIDDILVFSKTEQDHEKHLQIMLAICQKNGLILSPT 1593 Query: 490 KMKIAVPEVEVLGA 449 KMKIA E+E LGA Sbjct: 1594 KMKIAQAEIEFLGA 1607 Score = 48.1 bits (113), Expect(2) = 1e-10 Identities = 26/45 (57%), Positives = 33/45 (73%), Gaps = 1/45 (2%) Frame = -3 Query: 465 WKSLELDKE-LIIRTDC*AIISFFGKTADNKPSWVRRLAFTDYIS 334 +K LDK L +RTDC AIISFF K+ NKPS VR +AFTD+++ Sbjct: 1763 FKIYYLDKSSLCLRTDCQAIISFFNKSNVNKPSRVRWIAFTDFLT 1807 Score = 45.1 bits (105), Expect(2) = 1e-10 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 2/98 (2%) Frame = -2 Query: 358 VSFYRLHIGIGNSIHFEHIEGKDNQLADALSWLINCLIVLE--WSVKILEDLELVAPTLQ 185 ++F G+G ++ EHI+GK+N LADALS L+ + E K +DL + LQ Sbjct: 1800 IAFTDFLTGLGIPVNIEHIDGKNNHLADALSRLVTGFVFAEPQCQDKFQDDLGKLEAALQ 1859 Query: 184 ELQENPNREAKVQMIQALATLSSSLNNINNFCIDSTQS 71 E +E P + V+ + L + + F DS+ S Sbjct: 1860 EKKEAP-QAMHVEYVSLLIRSADRITRSLCFMRDSSHS 1896 >emb|CAA64701.1| polyprotein [Dioscorea bacilliform virus] Length = 338 Score = 117 bits (293), Expect = 5e-24 Identities = 55/72 (76%), Positives = 60/72 (83%) Frame = -3 Query: 855 KDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSIERTTFWVPNGLYEWLVIPF 676 KDQY+LP NTIL+KV SKIYSKFDLKS FHQV MHPDSI+ T F VP GLYEWLV+PF Sbjct: 206 KDQYSLPGINTILKKVGNSKIYSKFDLKSGFHQVAMHPDSIQWTAFCVPGGLYEWLVMPF 265 Query: 675 GLKNAPAIFNEK 640 GLKNAPA+F K Sbjct: 266 GLKNAPAVFQGK 277 Score = 78.6 bits (192), Expect = 3e-12 Identities = 37/70 (52%), Positives = 50/70 (71%) Frame = -2 Query: 670 EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 491 + P+ F KMDNCF+GTE+FIA+YIDDIL FS + + +HL +L I +++ L+LSP Sbjct: 268 KNAPAVFQGKMDNCFRGTEDFIAVYIDDILVFSRTPEEHAEHLLKMLSICKEHGLVLSPT 327 Query: 490 KMKIAVPEVE 461 KMKI P VE Sbjct: 328 KMKIGTPTVE 337 >gb|AER00544.1| ORF III [Citrus yellow mosaic virus] Length = 1976 Score = 117 bits (293), Expect = 5e-24 Identities = 53/73 (72%), Positives = 61/73 (83%) Frame = -3 Query: 858 NKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSIERTTFWVPNGLYEWLVIP 679 NKDQY+LP TIL+++ S I+SKFDLKS FHQV MHPDSIE T FWVP+GLYEWLV+P Sbjct: 1463 NKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSIEWTAFWVPSGLYEWLVMP 1522 Query: 678 FGLKNAPAIFNEK 640 FGLKNAPA+F K Sbjct: 1523 FGLKNAPAVFQRK 1535 Score = 83.2 bits (204), Expect = 1e-13 Identities = 43/74 (58%), Positives = 53/74 (71%) Frame = -2 Query: 670 EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 491 + P+ F RKMD+CFKGTE FIA+YIDDIL FSL E + +HL+ +L I QKN LILSP Sbjct: 1526 KNAPAVFQRKMDHCFKGTEAFIAVYIDDILVFSLTEWEHGEHLKIMLSICQKNGLILSPT 1585 Query: 490 KMKIAVPEVEVLGA 449 +M A +E LGA Sbjct: 1586 EMIFAHVGIEFLGA 1599 Score = 39.3 bits (90), Expect(2) = 7e-06 Identities = 23/42 (54%), Positives = 27/42 (64%), Gaps = 1/42 (2%) Frame = -3 Query: 465 WKSLELDKE-LIIRTDC*AIISFFGKTADNKPSWVRRLAFTD 343 +K LDK L +RTDC AIISFF K+ PS R +AFTD Sbjct: 1756 FKIYYLDKSSLCLRTDCQAIISFFNKSNVKMPSRFRWIAFTD 1797 Score = 37.7 bits (86), Expect(2) = 7e-06 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%) Frame = -2 Query: 358 VSFYRLHIGIGNSIHFEHIEGKDNQLADALSWLINCLIVLEWSVK--ILEDLELVAPTLQ 185 ++F L G+ ++ HI+G++N L DALS L+ +V E + +DL + LQ Sbjct: 1793 IAFTDLFTGLSIPVNLVHIDGQNNPLGDALSRLVTGFVVAEPQCQDSFQDDLGKLEAALQ 1852 Query: 184 ELQENP 167 E +E P Sbjct: 1853 EKKEAP 1858 >gb|AER00538.1| ORF III [Citrus yellow mosaic virus] Length = 1982 Score = 117 bits (293), Expect = 5e-24 Identities = 53/73 (72%), Positives = 61/73 (83%) Frame = -3 Query: 858 NKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSIERTTFWVPNGLYEWLVIP 679 NKDQY+LP TIL+++ S I+SKFDLKS FHQV MHPDSIE T FWVP+GLYEWLV+P Sbjct: 1470 NKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSIEWTAFWVPSGLYEWLVMP 1529 Query: 678 FGLKNAPAIFNEK 640 FGLKNAPA+F K Sbjct: 1530 FGLKNAPAVFQRK 1542 Score = 85.5 bits (210), Expect = 2e-14 Identities = 44/74 (59%), Positives = 54/74 (72%) Frame = -2 Query: 670 EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 491 + P+ F RKMD+CFKGTE FIA+YIDDI FS EQ + ++L+ +L I QKN LILSP Sbjct: 1533 KNAPAVFQRKMDHCFKGTEAFIAVYIDDIQVFSKTEQDHEEYLQIMLSICQKNGLILSPT 1592 Query: 490 KMKIAVPEVEVLGA 449 KMKIA E+ LGA Sbjct: 1593 KMKIAQAEIGFLGA 1606 Score = 48.1 bits (113), Expect(2) = 1e-10 Identities = 26/45 (57%), Positives = 33/45 (73%), Gaps = 1/45 (2%) Frame = -3 Query: 465 WKSLELDKE-LIIRTDC*AIISFFGKTADNKPSWVRRLAFTDYIS 334 +K LDK L +RTDC AIISFF K+ NKPS VR +AFTD+++ Sbjct: 1762 FKIYYLDKSSLCLRTDCQAIISFFNKSNVNKPSRVRWIAFTDFLT 1806 Score = 45.1 bits (105), Expect(2) = 1e-10 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 2/98 (2%) Frame = -2 Query: 358 VSFYRLHIGIGNSIHFEHIEGKDNQLADALSWLINCLIVLE--WSVKILEDLELVAPTLQ 185 ++F G+G ++ EHI+GK+N LADALS L+ + E K +DL + LQ Sbjct: 1799 IAFTDFLTGLGIPVNIEHIDGKNNHLADALSRLVTGFVFAEPQCQDKFQDDLGKLEAALQ 1858 Query: 184 ELQENPNREAKVQMIQALATLSSSLNNINNFCIDSTQS 71 E +E P + V+ + L + + F DS+ S Sbjct: 1859 EKKEAP-QAMHVEYVSLLIRSADRITRSLCFMRDSSHS 1895 >gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus] Length = 1967 Score = 117 bits (293), Expect = 5e-24 Identities = 53/73 (72%), Positives = 61/73 (83%) Frame = -3 Query: 858 NKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSIERTTFWVPNGLYEWLVIP 679 NKDQY+LP TIL+++ S I+SKFDLKS FHQV MHPDSIE T FWVP+GLYEWLV+P Sbjct: 1455 NKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSIEWTAFWVPSGLYEWLVMP 1514 Query: 678 FGLKNAPAIFNEK 640 FGLKNAPA+F K Sbjct: 1515 FGLKNAPAVFQRK 1527 Score = 92.0 bits (227), Expect = 2e-16 Identities = 46/74 (62%), Positives = 56/74 (75%) Frame = -2 Query: 670 EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 491 + P+ F RKMD+CFKGTE FIA+YIDDIL FS E+ + +HL+ +L I QKN LILSP Sbjct: 1518 KNAPAVFQRKMDHCFKGTEAFIAVYIDDILVFSKSEREHEEHLKIMLSICQKNGLILSPT 1577 Query: 490 KMKIAVPEVEVLGA 449 KMKIA E+E LGA Sbjct: 1578 KMKIAQVEIEFLGA 1591 Score = 48.1 bits (113), Expect(2) = 3e-10 Identities = 26/45 (57%), Positives = 33/45 (73%), Gaps = 1/45 (2%) Frame = -3 Query: 465 WKSLELDKE-LIIRTDC*AIISFFGKTADNKPSWVRRLAFTDYIS 334 +K LDK L +RTDC AIISFF K+ NKPS VR +AFTD+++ Sbjct: 1747 FKIYYLDKSSLCLRTDCQAIISFFNKSNVNKPSRVRWIAFTDFLT 1791 Score = 43.5 bits (101), Expect(2) = 3e-10 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%) Frame = -2 Query: 358 VSFYRLHIGIGNSIHFEHIEGKDNQLADALSWLINCLIVLE--WSVKILEDLELVAPTLQ 185 ++F G+G ++ EHI+GK+N LADALS L+ + E K +DL + LQ Sbjct: 1784 IAFTDFLTGLGIPVNIEHIDGKNNHLADALSRLVTGFVFAEPQCQDKFQDDLGKLEAALQ 1843 Query: 184 ELQENP 167 E +E P Sbjct: 1844 EKKEAP 1849 >gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus] Length = 1979 Score = 117 bits (293), Expect = 5e-24 Identities = 53/73 (72%), Positives = 61/73 (83%) Frame = -3 Query: 858 NKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSIERTTFWVPNGLYEWLVIP 679 NKDQY+LP TIL+++ S I+SKFDLKS FHQV MHPDSIE T FWVP+GLYEWLV+P Sbjct: 1465 NKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSIEWTAFWVPSGLYEWLVMP 1524 Query: 678 FGLKNAPAIFNEK 640 FGLKNAPA+F K Sbjct: 1525 FGLKNAPAVFQRK 1537 Score = 89.0 bits (219), Expect = 2e-15 Identities = 45/74 (60%), Positives = 55/74 (74%) Frame = -2 Query: 670 EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 491 + P+ F RKMD+CFKGTE FIA+YIDDIL FS E+ + +HL+ +L I QKN LILSP Sbjct: 1528 KNAPAVFQRKMDHCFKGTEAFIAVYIDDILVFSKTEREHEEHLQIMLSICQKNGLILSPT 1587 Query: 490 KMKIAVPEVEVLGA 449 KMKIA E+E GA Sbjct: 1588 KMKIAQAEIEFPGA 1601 Score = 48.1 bits (113), Expect(2) = 2e-09 Identities = 26/45 (57%), Positives = 33/45 (73%), Gaps = 1/45 (2%) Frame = -3 Query: 465 WKSLELDKE-LIIRTDC*AIISFFGKTADNKPSWVRRLAFTDYIS 334 +K LDK L +RTDC AIISFF K+ NKPS VR +AFTD+++ Sbjct: 1759 FKIYYLDKSSLCLRTDCQAIISFFNKSNVNKPSRVRWIAFTDFLT 1803 Score = 40.8 bits (94), Expect(2) = 2e-09 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%) Frame = -2 Query: 358 VSFYRLHIGIGNSIHFEHIEGKDNQLADALSWLINCLIVLE--WSVKILEDLELVAPTLQ 185 ++F G+G ++ EHI+GK+N LADALS L+ + E K +DL + L Sbjct: 1796 IAFTDFLTGLGIPVNIEHIDGKNNHLADALSRLVTGFVFAEPQCQDKFQDDLGKLEAALL 1855 Query: 184 ELQENP 167 E +E P Sbjct: 1856 EKKEAP 1861 >gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus] Length = 1976 Score = 117 bits (293), Expect = 5e-24 Identities = 53/73 (72%), Positives = 61/73 (83%) Frame = -3 Query: 858 NKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSIERTTFWVPNGLYEWLVIP 679 NKDQY+LP TIL+++ S I+SKFDLKS FHQV MHPDSIE T FWVP+GLYEWLV+P Sbjct: 1463 NKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSIEWTAFWVPSGLYEWLVMP 1522 Query: 678 FGLKNAPAIFNEK 640 FGLKNAPA+F K Sbjct: 1523 FGLKNAPAVFQRK 1535 Score = 91.7 bits (226), Expect = 3e-16 Identities = 46/74 (62%), Positives = 56/74 (75%) Frame = -2 Query: 670 EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 491 + P+ F RKMD+CFKGTE FIA+YIDDIL FS E+ + +HL+ +L I QKN LILSP Sbjct: 1526 KNAPAVFQRKMDHCFKGTEAFIAVYIDDILVFSKTEREHEEHLQIMLSICQKNGLILSPT 1585 Query: 490 KMKIAVPEVEVLGA 449 KMKIA E+E LGA Sbjct: 1586 KMKIAQAEIEFLGA 1599 Score = 48.1 bits (113), Expect(2) = 2e-09 Identities = 26/45 (57%), Positives = 33/45 (73%), Gaps = 1/45 (2%) Frame = -3 Query: 465 WKSLELDKE-LIIRTDC*AIISFFGKTADNKPSWVRRLAFTDYIS 334 +K LDK L +RTDC AIISFF K+ NKPS VR +AFTD+++ Sbjct: 1756 FKIYYLDKSSLCLRTDCQAIISFFNKSNVNKPSRVRWIAFTDFLT 1800 Score = 40.8 bits (94), Expect(2) = 2e-09 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%) Frame = -2 Query: 358 VSFYRLHIGIGNSIHFEHIEGKDNQLADALSWLINCLIVLE--WSVKILEDLELVAPTLQ 185 ++F G+G ++ EHI+GK+N LADALS L+ + E K +DL + L Sbjct: 1793 IAFTDFLTGLGIPVNIEHIDGKNNHLADALSRLVTGFVFAEPQCQDKFQDDLGKLEAALL 1852 Query: 184 ELQENP 167 E +E P Sbjct: 1853 EKKEAP 1858 >gb|AHG94942.1| ORF3, partial [Dioscorea bacilliform virus] Length = 1395 Score = 117 bits (292), Expect = 7e-24 Identities = 54/72 (75%), Positives = 60/72 (83%) Frame = -3 Query: 855 KDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSIERTTFWVPNGLYEWLVIPF 676 KDQY+LP NTIL+KV SKIYSKFDLKS FHQV MHPDSI+ T F VP GLYEWLV+PF Sbjct: 982 KDQYSLPGINTILKKVGNSKIYSKFDLKSGFHQVAMHPDSIQWTAFCVPGGLYEWLVMPF 1041 Query: 675 GLKNAPAIFNEK 640 GLKNAP++F K Sbjct: 1042 GLKNAPSVFQRK 1053 Score = 87.4 bits (215), Expect = 6e-15 Identities = 42/74 (56%), Positives = 54/74 (72%) Frame = -2 Query: 670 EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 491 + PS F RKMDNCF+GTE+FIA+YIDDIL FS + + +HL +L I +++ L+LSP Sbjct: 1044 KNAPSVFQRKMDNCFRGTEDFIAVYIDDILVFSRTPEEHAEHLLKMLSICKEHGLVLSPT 1103 Query: 490 KMKIAVPEVEVLGA 449 KMKI P VE LGA Sbjct: 1104 KMKIGTPTVEFLGA 1117 Score = 48.9 bits (115), Expect(2) = 2e-09 Identities = 25/46 (54%), Positives = 36/46 (78%), Gaps = 1/46 (2%) Frame = -3 Query: 468 KWKSLELDK-ELIIRTDC*AIISFFGKTADNKPSWVRRLAFTDYIS 334 K+K LDK EL+IRTDC AI++F+ K++ NKPS VR +AF D+++ Sbjct: 1272 KFKIHYLDKKELLIRTDCHAIMAFYNKSSCNKPSRVRWIAFNDFLT 1317 Score = 40.0 bits (92), Expect(2) = 2e-09 Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 3/71 (4%) Frame = -2 Query: 358 VSFYRLHIGIGNSIHFEHIEGKDNQLADALSWLINCLIV---LEWSVKILEDLELVAPTL 188 ++F G+G + EHI+GKDN LADALS L+ C I+ W K E L L Sbjct: 1310 IAFNDFLTGLGIPVTIEHIDGKDNVLADALSRLV-CSIIKNPAHWQDK-GELLRQTEEAL 1367 Query: 187 QELQENPNREA 155 Q++ + P+ A Sbjct: 1368 QQIMKKPHHGA 1378 >gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus] Length = 1968 Score = 117 bits (292), Expect = 7e-24 Identities = 52/73 (71%), Positives = 61/73 (83%) Frame = -3 Query: 858 NKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSIERTTFWVPNGLYEWLVIP 679 NKDQY+LP TIL+++ S I+SKFDLKS FHQV MHPDS+E T FWVP+GLYEWLV+P Sbjct: 1456 NKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSVEWTAFWVPSGLYEWLVMP 1515 Query: 678 FGLKNAPAIFNEK 640 FGLKNAPA+F K Sbjct: 1516 FGLKNAPAVFQRK 1528 Score = 90.5 bits (223), Expect = 7e-16 Identities = 45/74 (60%), Positives = 56/74 (75%) Frame = -2 Query: 670 EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 491 + P+ F RKMD+CFKGTE FIA+YIDDIL FS E+ + +HL+ +L I Q+N LILSP Sbjct: 1519 KNAPAVFQRKMDHCFKGTEAFIAVYIDDILVFSKTEKEHEEHLQIMLSICQRNGLILSPT 1578 Query: 490 KMKIAVPEVEVLGA 449 KMKIA E+E LGA Sbjct: 1579 KMKIAQAEIEFLGA 1592 Score = 48.1 bits (113), Expect(2) = 3e-10 Identities = 26/45 (57%), Positives = 33/45 (73%), Gaps = 1/45 (2%) Frame = -3 Query: 465 WKSLELDKE-LIIRTDC*AIISFFGKTADNKPSWVRRLAFTDYIS 334 +K LDK L +RTDC AIISFF K+ NKPS VR +AFTD+++ Sbjct: 1748 FKIYYLDKSSLCLRTDCQAIISFFNKSNVNKPSRVRWIAFTDFLT 1792 Score = 43.5 bits (101), Expect(2) = 3e-10 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%) Frame = -2 Query: 358 VSFYRLHIGIGNSIHFEHIEGKDNQLADALSWLINCLIVLE--WSVKILEDLELVAPTLQ 185 ++F G+G ++ EHI+GK+N LADALS L+ + E K +DL + LQ Sbjct: 1785 IAFTDFLTGLGIPVNIEHIDGKNNHLADALSRLVTGFVFAEPQCQDKFQDDLGRLEAALQ 1844 Query: 184 ELQENP 167 E +E P Sbjct: 1845 EKKEAP 1850 >emb|CAA64703.1| polyprotein [Dioscorea bacilliform virus] Length = 338 Score = 116 bits (291), Expect = 9e-24 Identities = 53/72 (73%), Positives = 60/72 (83%) Frame = -3 Query: 855 KDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSIERTTFWVPNGLYEWLVIPF 676 KDQY+LP NTIL+KV SKIYSKFDLKS FHQV MHPDS++ T F VP GLYEWLV+PF Sbjct: 206 KDQYSLPGINTILKKVGNSKIYSKFDLKSGFHQVAMHPDSVQWTAFCVPGGLYEWLVMPF 265 Query: 675 GLKNAPAIFNEK 640 GLKNAP++F K Sbjct: 266 GLKNAPSVFQRK 277 Score = 82.4 bits (202), Expect = 2e-13 Identities = 39/70 (55%), Positives = 51/70 (72%) Frame = -2 Query: 670 EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 491 + PS F RKMDNCF+GTE+FIA+YIDDIL FS + + +HL +L I +++ L+LSP Sbjct: 268 KNAPSVFQRKMDNCFRGTEDFIAVYIDDILVFSRTPEEHAEHLLKMLSICKEHGLVLSPT 327 Query: 490 KMKIAVPEVE 461 KMKI P VE Sbjct: 328 KMKIGTPTVE 337 >emb|CAA64275.1| unnamed protein product [Dioscorea bacilliform virus] Length = 338 Score = 116 bits (290), Expect = 1e-23 Identities = 54/72 (75%), Positives = 59/72 (81%) Frame = -3 Query: 855 KDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSIERTTFWVPNGLYEWLVIPF 676 KDQY+LP NTIL+KV KIYSKFDLKS FHQV MHPDSI+ T F VP GLYEWLV+PF Sbjct: 206 KDQYSLPGINTILKKVGNMKIYSKFDLKSGFHQVAMHPDSIQWTAFCVPGGLYEWLVMPF 265 Query: 675 GLKNAPAIFNEK 640 GLKNAPA+F K Sbjct: 266 GLKNAPAVFQRK 277 Score = 77.4 bits (189), Expect = 6e-12 Identities = 36/70 (51%), Positives = 49/70 (70%) Frame = -2 Query: 670 EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 491 + P+ F RKMD CF+GTE+FIA+Y DDIL FS + + +HL +L I +++ L+LSP Sbjct: 268 KNAPAVFQRKMDGCFRGTEDFIAVYFDDILVFSRTPEEHAEHLLKMLSICKEHGLVLSPR 327 Query: 490 KMKIAVPEVE 461 KMKI P VE Sbjct: 328 KMKIGTPTVE 337 >gb|ADN96018.1| polyprotein [Pineapple bacilliform comosus virus] Length = 772 Score = 115 bits (287), Expect = 3e-23 Identities = 52/72 (72%), Positives = 59/72 (81%) Frame = -3 Query: 855 KDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSIERTTFWVPNGLYEWLVIPF 676 KDQY+LP +TIL+K+ SKIYSKFDLKS FHQV MHPDS+ T FW NGLYEWLV+PF Sbjct: 287 KDQYSLPGISTILQKIGHSKIYSKFDLKSGFHQVAMHPDSVPWTAFWAINGLYEWLVMPF 346 Query: 675 GLKNAPAIFNEK 640 GLKNAPA+F K Sbjct: 347 GLKNAPAVFQRK 358 Score = 87.0 bits (214), Expect = 8e-15 Identities = 41/74 (55%), Positives = 55/74 (74%) Frame = -2 Query: 670 EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 491 + P+ F RKMD+CF+GTE+FIA+YIDDIL FS + + +HL L IV+KN L+LSP Sbjct: 349 KNAPAVFQRKMDHCFRGTEDFIAVYIDDILVFSETPEQHKKHLEVFLQIVRKNGLVLSPT 408 Query: 490 KMKIAVPEVEVLGA 449 KMK+ V +V+ LGA Sbjct: 409 KMKVGVQQVDFLGA 422 Score = 51.6 bits (122), Expect(2) = 8e-10 Identities = 23/37 (62%), Positives = 31/37 (83%) Frame = -3 Query: 444 KELIIRTDC*AIISFFGKTADNKPSWVRRLAFTDYIS 334 KEL++RTDC AI+SF+ K A+NKPS VR L F+D+I+ Sbjct: 585 KELVVRTDCQAIVSFYEKMANNKPSRVRWLTFSDFIT 621 Score = 38.9 bits (89), Expect(2) = 8e-10 Identities = 22/49 (44%), Positives = 29/49 (59%) Frame = -2 Query: 334 GIGNSIHFEHIEGKDNQLADALSWLINCLIVLEWSVKILEDLELVAPTL 188 GIG + FEHI+GKDN LAD LS L+ +++ E L+ V P L Sbjct: 622 GIGVPVKFEHIDGKDNLLADTLSRLV---VMMLHEEAYTEPLQRVLPLL 667 >gb|AAW30012.1| polyprotein [Citrus yellow mosaic virus] Length = 357 Score = 115 bits (287), Expect = 3e-23 Identities = 52/73 (71%), Positives = 60/73 (82%) Frame = -3 Query: 858 NKDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSIERTTFWVPNGLYEWLVIP 679 NKDQY+LP TIL+++ S I+SKFDLKS FHQV MHPDSIE T FWVP+GLYEWLV+P Sbjct: 264 NKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSIEWTAFWVPSGLYEWLVMP 323 Query: 678 FGLKNAPAIFNEK 640 GLKNAPA+F K Sbjct: 324 LGLKNAPAVFQRK 336 >gb|AEV42076.1| putative polyprotein [Pineapple bacilliform comosus virus] Length = 1826 Score = 114 bits (286), Expect = 3e-23 Identities = 52/71 (73%), Positives = 59/71 (83%) Frame = -3 Query: 852 DQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSIERTTFWVPNGLYEWLVIPFG 673 DQY+LP +TIL+K+ SKIYSKFDLKS FHQV MHPDS+ T FWV NGLYEWLV+PFG Sbjct: 1342 DQYSLPGISTILQKIGHSKIYSKFDLKSGFHQVAMHPDSVPWTAFWVINGLYEWLVMPFG 1401 Query: 672 LKNAPAIFNEK 640 LKNAPA+F K Sbjct: 1402 LKNAPAVFQRK 1412 Score = 87.0 bits (214), Expect = 8e-15 Identities = 41/74 (55%), Positives = 55/74 (74%) Frame = -2 Query: 670 EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 491 + P+ F RKMD+CF+GTE+FIA+YIDDIL FS + + +HL L IV+KN L+LSP Sbjct: 1403 KNAPAVFQRKMDHCFRGTEDFIAVYIDDILVFSETPEQHKKHLEVFLQIVRKNGLVLSPT 1462 Query: 490 KMKIAVPEVEVLGA 449 KMK+ V +V+ LGA Sbjct: 1463 KMKVGVQQVDFLGA 1476 Score = 51.6 bits (122), Expect(2) = 7e-10 Identities = 23/37 (62%), Positives = 31/37 (83%) Frame = -3 Query: 444 KELIIRTDC*AIISFFGKTADNKPSWVRRLAFTDYIS 334 KEL++RTDC AI+SF+ K A+NKPS VR L F+D+I+ Sbjct: 1639 KELVVRTDCQAIVSFYEKMANNKPSRVRWLTFSDFIT 1675 Score = 38.9 bits (89), Expect(2) = 7e-10 Identities = 21/49 (42%), Positives = 29/49 (59%) Frame = -2 Query: 334 GIGNSIHFEHIEGKDNQLADALSWLINCLIVLEWSVKILEDLELVAPTL 188 GIG + FEHI+GKDN LAD LS L+ +++ E L+ + P L Sbjct: 1676 GIGAPVKFEHIDGKDNLLADTLSRLV---VMMLHEEAYTEPLQRILPLL 1721 >gb|AHG32726.1| ORF3, partial [Dioscorea rotundata] Length = 579 Score = 114 bits (284), Expect = 6e-23 Identities = 51/72 (70%), Positives = 60/72 (83%) Frame = -3 Query: 855 KDQYNLPRNNTILRKVSTSKIYSKFDLKSSFHQVTMHPDSIERTTFWVPNGLYEWLVIPF 676 KDQY+LP NTIL+++ S IYSKFDLKS FHQV M P+SI+ T FWVP+GLYEWLV+PF Sbjct: 296 KDQYSLPGINTILKRIGQSVIYSKFDLKSGFHQVAMDPESIQWTAFWVPDGLYEWLVMPF 355 Query: 675 GLKNAPAIFNEK 640 GLKNAPA+F K Sbjct: 356 GLKNAPAVFQRK 367 Score = 90.1 bits (222), Expect = 9e-16 Identities = 42/74 (56%), Positives = 56/74 (75%) Frame = -2 Query: 670 EKCPSNF*RKMDNCFKGTENFIAIYIDDILFFSLDEQLYVQHLRTLLDIVQKNELILSPM 491 + P+ F RKMDNCF+GTE+FIA+YIDDIL FS ++ + QHL+ +L+I ++N L+LSP Sbjct: 358 KNAPAVFQRKMDNCFRGTEDFIAVYIDDILVFSRSQEEHAQHLKQMLEICRRNGLVLSPT 417 Query: 490 KMKIAVPEVEVLGA 449 KMKI VE LGA Sbjct: 418 KMKIGTQVVEFLGA 431