BLASTX nr result
ID: Zingiber25_contig00038421
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00038421
(256 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMT03145.1| hypothetical protein F775_09877 [Aegilops tauschii] 79 8e-13
gb|EEE58395.1| hypothetical protein OsJ_09560 [Oryza sativa Japo... 77 3e-12
gb|EEC74592.1| hypothetical protein OsI_10174 [Oryza sativa Indi... 77 3e-12
ref|NP_001049090.1| Os03g0168400 [Oryza sativa Japonica Group] g... 77 3e-12
ref|XP_003562027.1| PREDICTED: pentatricopeptide repeat-containi... 75 7e-12
ref|XP_006651076.1| PREDICTED: pentatricopeptide repeat-containi... 73 4e-11
ref|XP_006482624.1| PREDICTED: pentatricopeptide repeat-containi... 71 2e-10
emb|CBI22241.3| unnamed protein product [Vitis vinifera] 70 3e-10
ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containi... 70 3e-10
ref|XP_006431198.1| hypothetical protein CICLE_v10013587mg, part... 70 4e-10
tpg|DAA43586.1| TPA: hypothetical protein ZEAMMB73_728613 [Zea m... 70 4e-10
ref|XP_002323869.2| pentatricopeptide repeat-containing family p... 67 2e-09
ref|XP_004985565.1| PREDICTED: pentatricopeptide repeat-containi... 66 4e-09
ref|XP_006286917.1| hypothetical protein CARUB_v10000061mg [Caps... 65 1e-08
ref|XP_004306132.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
gb|EMJ18561.1| hypothetical protein PRUPE_ppa021574mg [Prunus pe... 65 1e-08
gb|EXB31946.1| hypothetical protein L484_013578 [Morus notabilis] 64 2e-08
ref|XP_004139757.1| PREDICTED: pentatricopeptide repeat-containi... 62 6e-08
ref|XP_004233926.1| PREDICTED: pentatricopeptide repeat-containi... 60 2e-07
ref|XP_004163793.1| PREDICTED: pentatricopeptide repeat-containi... 59 7e-07
>gb|EMT03145.1| hypothetical protein F775_09877 [Aegilops tauschii]
Length = 1507
Score = 78.6 bits (192), Expect = 8e-13
Identities = 41/85 (48%), Positives = 53/85 (62%)
Frame = +1
Query: 1 VHGNLSILGYRSLVRQMLLNGLMSCAIRLKDLILHKDRSLQLCLYNILIFYLFQTGKSSF 180
+H ++SI YR LVR+M S A+ LK+LI D+S L LYNIL+FYLF+
Sbjct: 916 IHASISISSYRLLVRRMCEQSQFSSALYLKELIQDSDKSKDLILYNILLFYLFKRRNILQ 975
Query: 181 VETLLSEMDDKDICPDKNTYDFLVH 255
V+ LL +M I PDK TYDFLV+
Sbjct: 976 VQDLLKDMKGNGISPDKTTYDFLVY 1000
>gb|EEE58395.1| hypothetical protein OsJ_09560 [Oryza sativa Japonica Group]
Length = 1276
Score = 76.6 bits (187), Expect = 3e-12
Identities = 41/85 (48%), Positives = 53/85 (62%)
Frame = +1
Query: 1 VHGNLSILGYRSLVRQMLLNGLMSCAIRLKDLILHKDRSLQLCLYNILIFYLFQTGKSSF 180
+ +LSI YR LVR+M +S A+RLK+LI +D+S +L LYNILIFYLF+
Sbjct: 918 MQNSLSISSYRFLVRRMCEQSRISSALRLKELIQDRDKSTELILYNILIFYLFRRRHILQ 977
Query: 181 VETLLSEMDDKDICPDKNTYDFLVH 255
V LL +M PD TYDFLV+
Sbjct: 978 VHNLLKDMKSNGFSPDTTTYDFLVN 1002
>gb|EEC74592.1| hypothetical protein OsI_10174 [Oryza sativa Indica Group]
Length = 1276
Score = 76.6 bits (187), Expect = 3e-12
Identities = 41/85 (48%), Positives = 53/85 (62%)
Frame = +1
Query: 1 VHGNLSILGYRSLVRQMLLNGLMSCAIRLKDLILHKDRSLQLCLYNILIFYLFQTGKSSF 180
+ +LSI YR LVR+M +S A+RLK+LI +D+S +L LYNILIFYLF+
Sbjct: 918 MQNSLSISSYRFLVRRMCEQSRISSALRLKELIQDRDKSTELILYNILIFYLFRRRHILQ 977
Query: 181 VETLLSEMDDKDICPDKNTYDFLVH 255
V LL +M PD TYDFLV+
Sbjct: 978 VHNLLKDMKSNGFSPDTTTYDFLVN 1002
>ref|NP_001049090.1| Os03g0168400 [Oryza sativa Japonica Group]
gi|19071617|gb|AAL84284.1|AC073556_1 putative
pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group] gi|108706387|gb|ABF94182.1|
pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113547561|dbj|BAF11004.1| Os03g0168400 [Oryza sativa
Japonica Group]
Length = 1337
Score = 76.6 bits (187), Expect = 3e-12
Identities = 41/85 (48%), Positives = 53/85 (62%)
Frame = +1
Query: 1 VHGNLSILGYRSLVRQMLLNGLMSCAIRLKDLILHKDRSLQLCLYNILIFYLFQTGKSSF 180
+ +LSI YR LVR+M +S A+RLK+LI +D+S +L LYNILIFYLF+
Sbjct: 911 MQNSLSISSYRFLVRRMCEQSRISSALRLKELIQDRDKSTELILYNILIFYLFRRRHILQ 970
Query: 181 VETLLSEMDDKDICPDKNTYDFLVH 255
V LL +M PD TYDFLV+
Sbjct: 971 VHNLLKDMKSNGFSPDTTTYDFLVN 995
>ref|XP_003562027.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15280-like, partial [Brachypodium distachyon]
Length = 1278
Score = 75.5 bits (184), Expect = 7e-12
Identities = 38/85 (44%), Positives = 51/85 (60%)
Frame = +1
Query: 1 VHGNLSILGYRSLVRQMLLNGLMSCAIRLKDLILHKDRSLQLCLYNILIFYLFQTGKSSF 180
+H ++SI YR LV +M S A+RLK+L+ D+S L LYNILIFYL +
Sbjct: 908 IHASISISSYRFLVHRMCEQSQFSSALRLKELVQDSDKSTDLILYNILIFYLIRRRNILQ 967
Query: 181 VETLLSEMDDKDICPDKNTYDFLVH 255
+ +L +M I PDK TYDFLV+
Sbjct: 968 IHDVLKDMKHNGISPDKTTYDFLVY 992
>ref|XP_006651076.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
[Oryza brachyantha]
Length = 1249
Score = 72.8 bits (177), Expect = 4e-11
Identities = 41/84 (48%), Positives = 50/84 (59%)
Frame = +1
Query: 4 HGNLSILGYRSLVRQMLLNGLMSCAIRLKDLILHKDRSLQLCLYNILIFYLFQTGKSSFV 183
H N+SI YR LVR+M +S A RLK+LI +D+S L LYNILIFYLF+ V
Sbjct: 899 HSNISISSYRFLVRRMCEQSRISSAFRLKELIQGRDKSTGLILYNILIFYLFRGRHILQV 958
Query: 184 ETLLSEMDDKDICPDKNTYDFLVH 255
LL +M D TYDFLV+
Sbjct: 959 HNLLKDMKSNGFPLDTTTYDFLVN 982
>ref|XP_006482624.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
[Citrus sinensis]
Length = 1259
Score = 70.9 bits (172), Expect = 2e-10
Identities = 32/82 (39%), Positives = 57/82 (69%)
Frame = +1
Query: 10 NLSILGYRSLVRQMLLNGLMSCAIRLKDLILHKDRSLQLCLYNILIFYLFQTGKSSFVET 189
+LSI YR+LVR M + G + A+ LK+L+L +++S L ++NIL+F+L +G V+
Sbjct: 907 SLSISSYRNLVRWMCMEGGVPWALNLKELMLGQNKSHNLIIFNILVFHLISSGNIFHVKR 966
Query: 190 LLSEMDDKDICPDKNTYDFLVH 255
+L E+ + ++ PD+ TY+FL++
Sbjct: 967 VLDELQENELLPDEGTYNFLIY 988
>emb|CBI22241.3| unnamed protein product [Vitis vinifera]
Length = 1256
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/80 (42%), Positives = 56/80 (70%)
Frame = +1
Query: 16 SILGYRSLVRQMLLNGLMSCAIRLKDLILHKDRSLQLCLYNILIFYLFQTGKSSFVETLL 195
SI YR++VR + +NG++ +R+K+L+L ++ L +YNILI++LFQTG S V+ +L
Sbjct: 898 SISVYRNVVRLLCMNGMVLPLLRMKELMLRENNFPHLIVYNILIYHLFQTGNSLLVKVIL 957
Query: 196 SEMDDKDICPDKNTYDFLVH 255
E+ K + D+ TY+FLV+
Sbjct: 958 GELHKKGLLFDEVTYNFLVY 977
>ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
[Vitis vinifera]
Length = 1273
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/80 (42%), Positives = 56/80 (70%)
Frame = +1
Query: 16 SILGYRSLVRQMLLNGLMSCAIRLKDLILHKDRSLQLCLYNILIFYLFQTGKSSFVETLL 195
SI YR++VR + +NG++ +R+K+L+L ++ L +YNILI++LFQTG S V+ +L
Sbjct: 915 SISVYRNVVRLLCMNGMVLPLLRMKELMLRENNFPHLIVYNILIYHLFQTGNSLLVKVIL 974
Query: 196 SEMDDKDICPDKNTYDFLVH 255
E+ K + D+ TY+FLV+
Sbjct: 975 GELHKKGLLFDEVTYNFLVY 994
>ref|XP_006431198.1| hypothetical protein CICLE_v10013587mg, partial [Citrus clementina]
gi|557533255|gb|ESR44438.1| hypothetical protein
CICLE_v10013587mg, partial [Citrus clementina]
Length = 1231
Score = 69.7 bits (169), Expect = 4e-10
Identities = 32/82 (39%), Positives = 57/82 (69%)
Frame = +1
Query: 10 NLSILGYRSLVRQMLLNGLMSCAIRLKDLILHKDRSLQLCLYNILIFYLFQTGKSSFVET 189
+LSI YR+LVR M + G + A+ LK+L+L +++S L ++NIL+F+L +G V+
Sbjct: 876 SLSISSYRNLVRWMCMEGGVPWALNLKELMLGQNKSHNLIIFNILVFHLMSSGNIFHVKR 935
Query: 190 LLSEMDDKDICPDKNTYDFLVH 255
+L E+ + ++ PD+ TY+FL++
Sbjct: 936 VLDELQENELLPDEVTYNFLIY 957
>tpg|DAA43586.1| TPA: hypothetical protein ZEAMMB73_728613 [Zea mays]
Length = 1072
Score = 69.7 bits (169), Expect = 4e-10
Identities = 39/85 (45%), Positives = 49/85 (57%)
Frame = +1
Query: 1 VHGNLSILGYRSLVRQMLLNGLMSCAIRLKDLILHKDRSLQLCLYNILIFYLFQTGKSSF 180
+H LSI YR LV +M S A L+ L H D+S +L NILIFYLFQ SS
Sbjct: 716 MHATLSISSYRFLVCRMCEQSRFSSASSLRALFQHTDKSRELIACNILIFYLFQRRNSSQ 775
Query: 181 VETLLSEMDDKDICPDKNTYDFLVH 255
+ LL +++ I DK TYDFLV+
Sbjct: 776 IHDLLKDIEGNGISLDKTTYDFLVY 800
>ref|XP_002323869.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550320105|gb|EEF04002.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 1255
Score = 67.4 bits (163), Expect = 2e-09
Identities = 33/82 (40%), Positives = 55/82 (67%)
Frame = +1
Query: 10 NLSILGYRSLVRQMLLNGLMSCAIRLKDLILHKDRSLQLCLYNILIFYLFQTGKSSFVET 189
+L+I YRS VR M L G + A+ LK +++ + +S + LYNILIFYL G+S V+
Sbjct: 891 SLTISSYRSYVRLMCLEGKVDYALSLKKVMVQESKSASIILYNILIFYLLTAGESMHVKK 950
Query: 190 LLSEMDDKDICPDKNTYDFLVH 255
+L+E+ ++ + ++ TY+FLV+
Sbjct: 951 VLNELQEEGLVLNEVTYNFLVY 972
>ref|XP_004985565.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
isoform X1 [Setaria italica]
gi|514821779|ref|XP_004985566.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g15280-like isoform X2 [Setaria italica]
gi|514821781|ref|XP_004985567.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g15280-like isoform X3 [Setaria italica]
gi|514821783|ref|XP_004985568.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g15280-like isoform X4 [Setaria italica]
gi|514821785|ref|XP_004985569.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g15280-like isoform X5 [Setaria italica]
Length = 1259
Score = 66.2 bits (160), Expect = 4e-09
Identities = 38/82 (46%), Positives = 48/82 (58%)
Frame = +1
Query: 10 NLSILGYRSLVRQMLLNGLMSCAIRLKDLILHKDRSLQLCLYNILIFYLFQTGKSSFVET 189
+LSI YR LV +M S A L+ L H D+S +L NILIFYL Q +S V
Sbjct: 906 DLSIPSYRFLVCRMCEQSRFSSASSLRALFQHSDKSRELITCNILIFYLSQRRNTSQVHD 965
Query: 190 LLSEMDDKDICPDKNTYDFLVH 255
LL +M+ I PD+ TYDFLV+
Sbjct: 966 LLKDMECNGISPDRTTYDFLVY 987
>ref|XP_006286917.1| hypothetical protein CARUB_v10000061mg [Capsella rubella]
gi|482555623|gb|EOA19815.1| hypothetical protein
CARUB_v10000061mg [Capsella rubella]
Length = 1230
Score = 64.7 bits (156), Expect = 1e-08
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +1
Query: 16 SILGYRSLVRQMLLNGLMSCAIRLKD-LILHKDRSLQLCLYNILIFYLFQTGKSSFVETL 192
S++ YR VR+M L AIRLK+ L+L + + +YN+LIFYLFQ V +
Sbjct: 876 SVMSYREYVRKMCLERQFLSAIRLKEFLVLGESNPGGVIIYNLLIFYLFQAKNRLEVNNV 935
Query: 193 LSEMDDKDICPDKNTYDFLVH 255
L EM +K PD+ T++FLVH
Sbjct: 936 LLEMREKGFLPDETTFNFLVH 956
>ref|XP_004306132.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
[Fragaria vesca subsp. vesca]
Length = 1246
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/82 (39%), Positives = 53/82 (64%)
Frame = +1
Query: 10 NLSILGYRSLVRQMLLNGLMSCAIRLKDLILHKDRSLQLCLYNILIFYLFQTGKSSFVET 189
N+S+ YR++V M L G + A L +L++ ++ +L +YNILIFY+F TG + V+
Sbjct: 882 NISLSTYRNMVGLMSLEGRVFHAWNLTELMIGQNDPHELSIYNILIFYIFPTGNTLLVKK 941
Query: 190 LLSEMDDKDICPDKNTYDFLVH 255
++ + DK + D+ TY+FLVH
Sbjct: 942 VVERLQDKKLLLDEVTYNFLVH 963
>gb|EMJ18561.1| hypothetical protein PRUPE_ppa021574mg [Prunus persica]
Length = 994
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/84 (38%), Positives = 53/84 (63%)
Frame = +1
Query: 4 HGNLSILGYRSLVRQMLLNGLMSCAIRLKDLILHKDRSLQLCLYNILIFYLFQTGKSSFV 183
H ++S+ +R+LV M + G + A+ LK+L+ + L +YNILIFYLFQTG + V
Sbjct: 628 HFSISLATFRNLVCLMCVEGKVLYAVNLKELMHGQSEPRDLTIYNILIFYLFQTGNTLIV 687
Query: 184 ETLLSEMDDKDICPDKNTYDFLVH 255
+L + +K + ++ TY+FLV+
Sbjct: 688 NNVLDHLQEKKLLLNEVTYNFLVY 711
>gb|EXB31946.1| hypothetical protein L484_013578 [Morus notabilis]
Length = 1087
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/81 (39%), Positives = 54/81 (66%)
Frame = +1
Query: 13 LSILGYRSLVRQMLLNGLMSCAIRLKDLILHKDRSLQLCLYNILIFYLFQTGKSSFVETL 192
LSI YR+LV M + G + A+RLK+ +L + +S L +YNIL+F+LF TG FV +
Sbjct: 726 LSIPTYRNLVHLMCMEGRVLRAVRLKERMLGQSKSHDLIIYNILVFHLFATGNILFVNDI 785
Query: 193 LSEMDDKDICPDKNTYDFLVH 255
+ ++ +++ D+ +Y+FLV+
Sbjct: 786 VHDLQKEEVELDEVSYNFLVY 806
>ref|XP_004139757.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
[Cucumis sativus]
Length = 1246
Score = 62.4 bits (150), Expect = 6e-08
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +1
Query: 10 NLSILGYRSLVRQMLLNGLMSCAIRLKDLILHKDRSLQLCLYNILIFYLFQTGKSSFVET 189
+LS+ Y+ LV M + G A+ +KDL+L +S +YNILIFY+ ++G S V
Sbjct: 884 SLSMPSYKKLVCFMCMEGRSLQALHIKDLMLRNSKSHDCVIYNILIFYILRSGNGSLVPK 943
Query: 190 LLSE-MDDKDICPDKNTYDFLVH 255
+L E + + + PD TYDFLV+
Sbjct: 944 ILDELLHGRKLIPDGVTYDFLVY 966
>ref|XP_004233926.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
[Solanum lycopersicum]
Length = 1237
Score = 60.5 bits (145), Expect = 2e-07
Identities = 34/80 (42%), Positives = 50/80 (62%)
Frame = +1
Query: 13 LSILGYRSLVRQMLLNGLMSCAIRLKDLILHKDRSLQLCLYNILIFYLFQTGKSSFVETL 192
+SI YR++VR M G +S A+ LKD +L + +YNILI+ LF T K+S V TL
Sbjct: 880 ISIASYRNIVRLMCTRGKVSTALCLKDHLLKQTNPPIAVIYNILIYSLFSTNKTSVVYTL 939
Query: 193 LSEMDDKDICPDKNTYDFLV 252
+ E+ K + D+ TY++LV
Sbjct: 940 VHEILGKGLQLDEVTYNYLV 959
>ref|XP_004163793.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
[Cucumis sativus]
Length = 1225
Score = 58.9 bits (141), Expect = 7e-07
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +1
Query: 10 NLSILGYRSLVRQMLLNGLMSCAIRLKDLILHKDRSLQLCLYNILIFYLFQTGKSSFVET 189
+LS+ + LV M + G A+ +KDL+L +S +YNILIFY+ ++G S V
Sbjct: 863 SLSMPSCKKLVCFMCMEGRSLQALHIKDLMLRNSKSHDCVIYNILIFYILRSGNGSLVPK 922
Query: 190 LLSE-MDDKDICPDKNTYDFLVH 255
+L E + + + PD TYDFLV+
Sbjct: 923 ILDELLHGRKLIPDGVTYDFLVY 945