BLASTX nr result
ID: Zingiber25_contig00038335
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00038335
(315 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002531409.1| cyclin d, putative [Ricinus communis] gi|223... 62 1e-07
gb|AAL47479.1| cyclin D1 [Helianthus tuberosus] 61 2e-07
ref|XP_006836691.1| hypothetical protein AMTR_s00088p00097010 [A... 60 2e-07
gb|ESW29494.1| hypothetical protein PHAVU_002G074800g [Phaseolus... 60 4e-07
ref|XP_006483788.1| PREDICTED: cyclin-D1-1-like [Citrus sinensis] 59 5e-07
ref|XP_006438465.1| hypothetical protein CICLE_v10032080mg [Citr... 59 5e-07
tpg|DAA61294.1| TPA: cyclin delta-2 [Zea mays] 59 7e-07
gb|ACN33362.1| unknown [Zea mays] gi|224029671|gb|ACN33911.1| un... 59 7e-07
ref|NP_001149823.1| cyclin delta-2 [Zea mays] gi|195634883|gb|AC... 59 7e-07
emb|CAA58285.1| cyclin delta-1 [Arabidopsis thaliana] 59 9e-07
ref|NP_177178.1| cyclin-D1-1 [Arabidopsis thaliana] gi|59802916|... 59 9e-07
gb|AAL35986.1| cyclin D1 [Arabidopsis thaliana] 59 9e-07
ref|XP_004143797.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus... 58 1e-06
ref|XP_002462322.1| hypothetical protein SORBIDRAFT_02g023800 [S... 58 1e-06
ref|XP_006390912.1| hypothetical protein EUTSA_v10018896mg [Eutr... 57 3e-06
ref|XP_006302511.1| hypothetical protein CARUB_v10020608mg [Caps... 57 3e-06
ref|XP_006302510.1| hypothetical protein CARUB_v10020608mg [Caps... 57 3e-06
ref|XP_002887287.1| cyclin delta-1 [Arabidopsis lyrata subsp. ly... 57 3e-06
gb|EAZ44579.1| hypothetical protein OsJ_29198 [Oryza sativa Japo... 57 3e-06
gb|AEV41133.1| D1-type cyclin [Populus x canadensis] 57 3e-06
>ref|XP_002531409.1| cyclin d, putative [Ricinus communis] gi|223529002|gb|EEF30993.1|
cyclin d, putative [Ricinus communis]
Length = 386
Score = 61.6 bits (148), Expect = 1e-07
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 16/96 (16%)
Frame = +3
Query: 75 CF-DLHCTEDAGELVGYRGDADNSISVEGEEAAADTAGSV---------------RFPVE 206
CF DL C+ED+ E+ + S +E ++ S RF
Sbjct: 47 CFNDLLCSEDSSEIFSTGDSPEYSSDLESPAGTVESIASFIEDERNFVPGFDYLSRFQSR 106
Query: 207 SVDPAARRDAVDWILKVRACYRFRPLTAYLAVIYMD 314
S+D +AR D+V WILKV+ YRF+PLTAYL+V Y+D
Sbjct: 107 SLDASAREDSVAWILKVQTYYRFQPLTAYLSVNYLD 142
>gb|AAL47479.1| cyclin D1 [Helianthus tuberosus]
Length = 315
Score = 60.8 bits (146), Expect = 2e-07
Identities = 41/95 (43%), Positives = 54/95 (56%), Gaps = 15/95 (15%)
Frame = +3
Query: 75 CF-DLHCTEDAGELVG-----------YRGDADNSIS--VEGEEAAADTAGSV-RFPVES 209
CF DL C ED+G L G Y GD D+SI+ +E E V RF +
Sbjct: 8 CFSDLLCCEDSGILSGDDRPECSYDFEYSGDFDDSIAEFIEQERKFVPGIDYVERFQSQV 67
Query: 210 VDPAARRDAVDWILKVRACYRFRPLTAYLAVIYMD 314
+D +AR ++V WILKV+ Y F+PLTAYL+V Y+D
Sbjct: 68 LDASAREESVAWILKVQRFYGFQPLTAYLSVNYLD 102
>ref|XP_006836691.1| hypothetical protein AMTR_s00088p00097010 [Amborella trichopoda]
gi|548839251|gb|ERM99544.1| hypothetical protein
AMTR_s00088p00097010 [Amborella trichopoda]
Length = 329
Score = 60.5 bits (145), Expect = 2e-07
Identities = 39/92 (42%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Frame = +3
Query: 81 DLHCTEDAGELVGYRGDADNSISVEGEEAAADTAG--------------SVRFPVESVDP 218
DL C+EDA + G D S E + A AG S RF S+D
Sbjct: 11 DLLCSEDAS----FVGICDRDFSPEIDFPADSVAGFLEYESDFIPPNDYSERFRDGSIDL 66
Query: 219 AARRDAVDWILKVRACYRFRPLTAYLAVIYMD 314
+AR+DA+ WIL+V Y+FRPLTAYLAV Y+D
Sbjct: 67 SARKDAIAWILRVHTYYQFRPLTAYLAVNYVD 98
>gb|ESW29494.1| hypothetical protein PHAVU_002G074800g [Phaseolus vulgaris]
Length = 444
Score = 59.7 bits (143), Expect = 4e-07
Identities = 40/92 (43%), Positives = 50/92 (54%), Gaps = 15/92 (16%)
Frame = +3
Query: 84 LHCTEDA-----GELVGYRGDADNSISVEGEEAAA---DTAGSV-------RFPVESVDP 218
L C ED+ GE G D D+S E + A D V RF S+D
Sbjct: 124 LLCGEDSSGVLSGESPGCSSDLDSSPPSEEDSIAGFIEDERHFVPGFEYLNRFQSRSLDA 183
Query: 219 AARRDAVDWILKVRACYRFRPLTAYLAVIYMD 314
+AR ++V WILKV+ACY F+PLTAYL+V YMD
Sbjct: 184 SAREESVAWILKVQACYAFQPLTAYLSVNYMD 215
>ref|XP_006483788.1| PREDICTED: cyclin-D1-1-like [Citrus sinensis]
Length = 330
Score = 59.3 bits (142), Expect = 5e-07
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 15/93 (16%)
Frame = +3
Query: 81 DLHCTEDAGELVGYRGDADNSISVEGEEAAADT-AGSV--------------RFPVESVD 215
DL C ED+G G A +S +E + ++ AG + RF +S+D
Sbjct: 11 DLLCGEDSGIFTGESSPACSSSDLESSVSIEESIAGFIEDERNFVPGFDYLTRFQTQSLD 70
Query: 216 PAARRDAVDWILKVRACYRFRPLTAYLAVIYMD 314
+AR ++V WILKV+A Y F PLT+YL+V YMD
Sbjct: 71 ASAREESVAWILKVQAYYNFLPLTSYLSVNYMD 103
>ref|XP_006438465.1| hypothetical protein CICLE_v10032080mg [Citrus clementina]
gi|557540661|gb|ESR51705.1| hypothetical protein
CICLE_v10032080mg [Citrus clementina]
Length = 330
Score = 59.3 bits (142), Expect = 5e-07
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 15/93 (16%)
Frame = +3
Query: 81 DLHCTEDAGELVGYRGDADNSISVEGEEAAADT-AGSV--------------RFPVESVD 215
DL C ED+G G A +S +E + ++ AG + RF +S+D
Sbjct: 11 DLLCGEDSGIFTGESSPACSSSDLESSVSIEESIAGFIEDERNFVPGFDYLTRFQTQSLD 70
Query: 216 PAARRDAVDWILKVRACYRFRPLTAYLAVIYMD 314
+AR ++V WILKV+A Y F PLT+YL+V YMD
Sbjct: 71 ASAREESVAWILKVQAYYNFLPLTSYLSVNYMD 103
>tpg|DAA61294.1| TPA: cyclin delta-2 [Zea mays]
Length = 325
Score = 58.9 bits (141), Expect = 7e-07
Identities = 39/100 (39%), Positives = 49/100 (49%), Gaps = 21/100 (21%)
Frame = +3
Query: 78 FDLHCTED---AGELVGYRGDADNSISVEGEEAAADTAGSV------------------R 194
+DL C ED L+ D D S +++AA A S+ R
Sbjct: 6 YDLLCAEDDAAGSALLCTTDDDDGCCSAVEDDSAAAAAASIAELIGGEAQYSPRPDYPDR 65
Query: 195 FPVESVDPAARRDAVDWILKVRACYRFRPLTAYLAVIYMD 314
S+DPAAR ++V WILKV+ Y F PLTAYLAV YMD
Sbjct: 66 LRSRSIDPAARAESVAWILKVQEYYGFLPLTAYLAVNYMD 105
>gb|ACN33362.1| unknown [Zea mays] gi|224029671|gb|ACN33911.1| unknown [Zea mays]
gi|414885279|tpg|DAA61293.1| TPA: hypothetical protein
ZEAMMB73_119429 [Zea mays]
Length = 324
Score = 58.9 bits (141), Expect = 7e-07
Identities = 39/100 (39%), Positives = 49/100 (49%), Gaps = 21/100 (21%)
Frame = +3
Query: 78 FDLHCTED---AGELVGYRGDADNSISVEGEEAAADTAGSV------------------R 194
+DL C ED L+ D D S +++AA A S+ R
Sbjct: 6 YDLLCAEDDAAGSALLCTTDDDDGCCSAVEDDSAAAAAASIAELIGGEAQYSPRPDYPDR 65
Query: 195 FPVESVDPAARRDAVDWILKVRACYRFRPLTAYLAVIYMD 314
S+DPAAR ++V WILKV+ Y F PLTAYLAV YMD
Sbjct: 66 LRSRSIDPAARAESVAWILKVQEYYGFLPLTAYLAVNYMD 105
>ref|NP_001149823.1| cyclin delta-2 [Zea mays] gi|195634883|gb|ACG36910.1| cyclin
delta-2 [Zea mays]
Length = 322
Score = 58.9 bits (141), Expect = 7e-07
Identities = 40/99 (40%), Positives = 49/99 (49%), Gaps = 20/99 (20%)
Frame = +3
Query: 78 FDLHCTED--AGELVGYRGDADNSISVEGEEAAADTAGSV------------------RF 197
+DL C ED AG + D D+ EE +A A S+ R
Sbjct: 6 YDLLCAEDDAAGSALLCTTDDDDGCCSAVEEDSAAAAASIAELIGGEAQYSPRPDYPDRL 65
Query: 198 PVESVDPAARRDAVDWILKVRACYRFRPLTAYLAVIYMD 314
S+DPAAR ++V WILKV+ Y F PLTAYLAV YMD
Sbjct: 66 RSRSIDPAARAESVAWILKVQEYYGFLPLTAYLAVNYMD 104
>emb|CAA58285.1| cyclin delta-1 [Arabidopsis thaliana]
Length = 335
Score = 58.5 bits (140), Expect = 9e-07
Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 18/96 (18%)
Frame = +3
Query: 81 DLHCTEDAGELVGYRGDADNSISVEGEEAAADTAGSV------------------RFPVE 206
DL C ED+G G ++++ E + S+ RF
Sbjct: 21 DLFCGEDSGVFSG-----ESTVDFSSSEVDSWPGDSIACFIEDERHFVPGHDYLSRFQTR 75
Query: 207 SVDPAARRDAVDWILKVRACYRFRPLTAYLAVIYMD 314
S+D +AR D+V WILKV+A Y F+PLTAYLAV YMD
Sbjct: 76 SLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMD 111
>ref|NP_177178.1| cyclin-D1-1 [Arabidopsis thaliana]
gi|59802916|sp|P42751.3|CCD11_ARATH RecName:
Full=Cyclin-D1-1; AltName: Full=Cyclin-delta-1;
Short=Cyclin-d1; AltName: Full=G1/S-specific
cyclin-D1-1; Short=CycD1;1 gi|2194121|gb|AAB61096.1|
Strong similarity to Arabidopsis cyclin delta-1
(gb|ATCD1). EST gb|ATTS4338 comes from this gene
[Arabidopsis thaliana] gi|26449478|dbj|BAC41865.1|
unknown protein [Arabidopsis thaliana]
gi|28950911|gb|AAO63379.1| At1g70210 [Arabidopsis
thaliana] gi|332196913|gb|AEE35034.1| cyclin-D1-1
[Arabidopsis thaliana]
Length = 339
Score = 58.5 bits (140), Expect = 9e-07
Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 18/96 (18%)
Frame = +3
Query: 81 DLHCTEDAGELVGYRGDADNSISVEGEEAAADTAGSV------------------RFPVE 206
DL C ED+G G ++++ E + S+ RF
Sbjct: 21 DLFCGEDSGVFSG-----ESTVDFSSSEVDSWPGDSIACFIEDERHFVPGHDYLSRFQTR 75
Query: 207 SVDPAARRDAVDWILKVRACYRFRPLTAYLAVIYMD 314
S+D +AR D+V WILKV+A Y F+PLTAYLAV YMD
Sbjct: 76 SLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMD 111
>gb|AAL35986.1| cyclin D1 [Arabidopsis thaliana]
Length = 120
Score = 58.5 bits (140), Expect = 9e-07
Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 18/96 (18%)
Frame = +3
Query: 81 DLHCTEDAGELVGYRGDADNSISVEGEEAAADTAGSV------------------RFPVE 206
DL C ED+G G ++++ E + S+ RF
Sbjct: 21 DLFCGEDSGVFSG-----ESTVDFSSSEVDSWPGDSIACFIEDERHFVPGHDYLSRFQTR 75
Query: 207 SVDPAARRDAVDWILKVRACYRFRPLTAYLAVIYMD 314
S+D +AR D+V WILKV+A Y F+PLTAYLAV YMD
Sbjct: 76 SLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMD 111
>ref|XP_004143797.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus]
gi|449527605|ref|XP_004170800.1| PREDICTED:
cyclin-D1-1-like [Cucumis sativus]
Length = 335
Score = 57.8 bits (138), Expect = 1e-06
Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 17/97 (17%)
Frame = +3
Query: 75 CF-DLH--CTEDA-----GELVGYRGDADNSISVEGEEAA--ADTAGSV-------RFPV 203
CF D H C ED+ G+L+ Y D ++ S E A+ D V RF
Sbjct: 9 CFIDSHLLCDEDSSGILSGDLLEYSSDLESPASSEDSIASFIEDERHFVPGIDYLSRFQS 68
Query: 204 ESVDPAARRDAVDWILKVRACYRFRPLTAYLAVIYMD 314
+S+D +AR D+V WILKV+A Y F+PLTAYL+V Y+D
Sbjct: 69 QSLDSSARADSVAWILKVQAYYGFQPLTAYLSVNYLD 105
>ref|XP_002462322.1| hypothetical protein SORBIDRAFT_02g023800 [Sorghum bicolor]
gi|241925699|gb|EER98843.1| hypothetical protein
SORBIDRAFT_02g023800 [Sorghum bicolor]
Length = 333
Score = 57.8 bits (138), Expect = 1e-06
Identities = 39/93 (41%), Positives = 46/93 (49%), Gaps = 21/93 (22%)
Frame = +3
Query: 99 DAGELVGYRGDADNS-------ISVEGEEAAADTAGSV--------------RFPVESVD 215
DA G GD D +VE EE+AA A + R S+D
Sbjct: 20 DAAAAAGDVGDGDEDDDDDGCCSAVEDEESAASIAELIGGEAQYSPRPDYPDRLRSRSID 79
Query: 216 PAARRDAVDWILKVRACYRFRPLTAYLAVIYMD 314
PAAR ++V WILKV+ Y F PLTAYLAV YMD
Sbjct: 80 PAARAESVAWILKVQEYYGFLPLTAYLAVNYMD 112
>ref|XP_006390912.1| hypothetical protein EUTSA_v10018896mg [Eutrema salsugineum]
gi|557087346|gb|ESQ28198.1| hypothetical protein
EUTSA_v10018896mg [Eutrema salsugineum]
Length = 317
Score = 57.0 bits (136), Expect = 3e-06
Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Frame = +3
Query: 81 DLHCTEDAGELVGYRGDA-------DNSISVEGEEAAADTAGS---VRFPVESVDPAARR 230
DL C ED+G G + D+SI+ E+ G RF +S+D + R
Sbjct: 2 DLLCGEDSGVFSGESFSSEEVDSWPDDSIASCIEDERHFVPGLDYLSRFQSQSLDASVRE 61
Query: 231 DAVDWILKVRACYRFRPLTAYLAVIYMD 314
++V WILKV+A Y F+PLTAYLAV YMD
Sbjct: 62 ESVSWILKVQAYYNFQPLTAYLAVNYMD 89
>ref|XP_006302511.1| hypothetical protein CARUB_v10020608mg [Capsella rubella]
gi|482571221|gb|EOA35409.1| hypothetical protein
CARUB_v10020608mg [Capsella rubella]
Length = 338
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = +3
Query: 192 RFPVESVDPAARRDAVDWILKVRACYRFRPLTAYLAVIYMD 314
RF S+D +AR D+V WILKV+A Y+F+PLTAYLAV YMD
Sbjct: 66 RFLSRSLDASAREDSVAWILKVQAYYKFQPLTAYLAVNYMD 106
>ref|XP_006302510.1| hypothetical protein CARUB_v10020608mg [Capsella rubella]
gi|482571220|gb|EOA35408.1| hypothetical protein
CARUB_v10020608mg [Capsella rubella]
Length = 331
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = +3
Query: 192 RFPVESVDPAARRDAVDWILKVRACYRFRPLTAYLAVIYMD 314
RF S+D +AR D+V WILKV+A Y+F+PLTAYLAV YMD
Sbjct: 66 RFLSRSLDASAREDSVAWILKVQAYYKFQPLTAYLAVNYMD 106
>ref|XP_002887287.1| cyclin delta-1 [Arabidopsis lyrata subsp. lyrata]
gi|297333128|gb|EFH63546.1| cyclin delta-1 [Arabidopsis
lyrata subsp. lyrata]
Length = 343
Score = 57.0 bits (136), Expect = 3e-06
Identities = 38/91 (41%), Positives = 48/91 (52%), Gaps = 13/91 (14%)
Frame = +3
Query: 81 DLHCTEDAGELVGYR----------GDADNSISVEGEEAAADTAGS---VRFPVESVDPA 221
DL C ED+G G D+SI+ E+ G RF +S+D +
Sbjct: 25 DLLCGEDSGVFSGESTVDFSSSEIDSWPDDSIACFIEDERHFVPGHDYLSRFQTQSLDAS 84
Query: 222 ARRDAVDWILKVRACYRFRPLTAYLAVIYMD 314
AR D+V WILKV+ Y F+PLTAYLAV YMD
Sbjct: 85 AREDSVAWILKVQEYYNFQPLTAYLAVNYMD 115
>gb|EAZ44579.1| hypothetical protein OsJ_29198 [Oryza sativa Japonica Group]
Length = 271
Score = 57.0 bits (136), Expect = 3e-06
Identities = 43/101 (42%), Positives = 49/101 (48%), Gaps = 24/101 (23%)
Frame = +3
Query: 84 LHCTEDAGELV--------GYRGDADNSISVEGEE--AAADTAGSV-------------- 191
L C EDAG V + D SV GEE +AA A +
Sbjct: 11 LLCAEDAGAAVFDVAVDISTCTTEDDECCSVGGEELYSAASIAELIGGEADYSPRSDYPD 70
Query: 192 RFPVESVDPAARRDAVDWILKVRACYRFRPLTAYLAVIYMD 314
RF S+DPAAR D+V WILKV+ F PLTAYLAV YMD
Sbjct: 71 RFRSRSIDPAARADSVSWILKVQEYNGFLPLTAYLAVNYMD 111
>gb|AEV41133.1| D1-type cyclin [Populus x canadensis]
Length = 327
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/41 (60%), Positives = 33/41 (80%)
Frame = +3
Query: 192 RFPVESVDPAARRDAVDWILKVRACYRFRPLTAYLAVIYMD 314
RF +S+D +AR +V WILKV+ACY F+PLTAYL+V Y+D
Sbjct: 61 RFQSQSLDASAREQSVAWILKVQACYGFQPLTAYLSVNYLD 101