BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00038204
         (531 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006409479.1| hypothetical protein EUTSA_v10022658mg [Eutr...    63   5e-08
ref|XP_006299009.1| hypothetical protein CARUB_v10015136mg [Caps...    61   1e-07
ref|NP_179197.1| pentatricopeptide repeat-containing protein [Ar...    61   2e-07
ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containi...    59   7e-07
ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
ref|XP_004145397.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
ref|XP_006349623.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06
ref|XP_004248897.1| PREDICTED: pentatricopeptide repeat-containi...    55   1e-05

>ref|XP_006409479.1| hypothetical protein EUTSA_v10022658mg [Eutrema salsugineum]
           gi|557110641|gb|ESQ50932.1| hypothetical protein
           EUTSA_v10022658mg [Eutrema salsugineum]
          Length = 495

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 43/106 (40%), Positives = 56/106 (52%)
 Frame = +1

Query: 25  PSRSLSSPTFRNAASAAPFTPSRSLSSPAYDLPLLSADDEAVVSSAFSILRELRSKRRWT 204
           P+R     +  + ASA+  T    +SSP  D    +  D  ++S A SIL   RSK RW+
Sbjct: 12  PTRKPKPDSTHSIASASLTT----VSSPPPDHSNPTPSDP-LISDAVSILTHHRSKSRWS 66

Query: 205 FLKSVHHPTGFTPVQFXXXXXXXXXXXXXXXGFFLFTRRHSLCNHD 342
            L+S++ P+GFTP QF                FFLFTRRHSLC HD
Sbjct: 67  TLRSLN-PSGFTPSQFSEITLRLRNNPHLSLRFFLFTRRHSLCPHD 111


>ref|XP_006299009.1| hypothetical protein CARUB_v10015136mg [Capsella rubella]
           gi|482567718|gb|EOA31907.1| hypothetical protein
           CARUB_v10015136mg [Capsella rubella]
          Length = 492

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/71 (46%), Positives = 40/71 (56%)
 Frame = +1

Query: 130 SADDEAVVSSAFSILRELRSKRRWTFLKSVHHPTGFTPVQFXXXXXXXXXXXXXXXGFFL 309
           S   + ++S A SIL   RSK RW+ L+S+ HP GFTP QF                FFL
Sbjct: 29  SPPSDPLISDAVSILTHHRSKSRWSTLRSL-HPYGFTPFQFSEITLRLRNNPHLSLRFFL 87

Query: 310 FTRRHSLCNHD 342
           FTRR SLC+HD
Sbjct: 88  FTRRFSLCSHD 98


>ref|NP_179197.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75267579|sp|Q9XIM8.1|PP155_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g15980 gi|5306237|gb|AAD41970.1| hypothetical protein
           [Arabidopsis thaliana] gi|330251359|gb|AEC06453.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 498

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 33/74 (44%), Positives = 43/74 (58%)
 Frame = +1

Query: 130 SADDEAVVSSAFSILRELRSKRRWTFLKSVHHPTGFTPVQFXXXXXXXXXXXXXXXGFFL 309
           S   + ++S A SIL   RSK RW+ L+S+  P+GFTP QF                FFL
Sbjct: 35  SPPSDPLISDAVSILTHHRSKSRWSTLRSLQ-PSGFTPSQFSEITLCLRNNPHLSLRFFL 93

Query: 310 FTRRHSLCNHDSLS 351
           FTRR+SLC+HD+ S
Sbjct: 94  FTRRYSLCSHDTHS 107


>ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Vitis vinifera]
          Length = 492

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 45/149 (30%), Positives = 61/149 (40%), Gaps = 2/149 (1%)
 Frame = +1

Query: 79  FTP--SRSLSSPAYDLPLLSADDEAVVSSAFSILRELRSKRRWTFLKSVHHPTGFTPVQF 252
           FTP   ++L      LP      + ++S+A SILR  RSK RW+ L+S+  P GFTP + 
Sbjct: 11  FTPLARKTLCLSLSSLPSDQNPTKTLISTAVSILRHQRSKSRWSHLQSL-FPKGFTPTEA 69

Query: 253 XXXXXXXXXXXXXXXGFFLFTRRHSLCNHDSLSFXXXXXXXXXXXXXXXXXXXXQAAIRX 432
                           FFL+    SLCNH  LS+                    + AIR 
Sbjct: 70  SQIVLQIKNNPHLALSFFLWCHHKSLCNHTLLSYSTIIHILARARLKSQALGLIRTAIR- 128

Query: 433 XXXXXXXXXXXXXXXXXPPEIFKTLAKTY 519
                            PP+IF++L KTY
Sbjct: 129 ------VFDDSDECSSQPPKIFESLVKTY 151


>ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Cucumis sativus]
          Length = 499

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 46/157 (29%), Positives = 63/157 (40%), Gaps = 2/157 (1%)
 Frame = +1

Query: 58  NAASAAPFTPSRSLSSPAYDLPLLSADDEAVVSSAFSILRELRSKRRWTFLKSVHHPTGF 237
           N+     F+ S S SSP  D    S   +  +S+  S+L   RSK RW FL S+  P GF
Sbjct: 15  NSTVHLQFSSSFSSSSPPTDP---SPSTKPSISTVVSVLTHQRSKSRWRFLNSLC-PNGF 70

Query: 238 TPVQFXXXXXXXXXXXXXXXGFFLFTRRHSLCNHDSLSFXXXXXXXXXXXXXXXXXXXXQ 417
            P +F                FFL+T+  SLCNH+ +S+                    Q
Sbjct: 71  DPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGRLRTHAKDVIQ 130

Query: 418 AAIR--XXXXXXXXXXXXXXXXXXPPEIFKTLAKTYR 522
            AIR                    P ++F+TL KTY+
Sbjct: 131 TAIRAAQLEDSDNYSKTERFSPSRPLKLFETLVKTYK 167


>ref|XP_004145397.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Cucumis sativus]
           gi|449472579|ref|XP_004153637.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g15980-like [Cucumis sativus]
          Length = 499

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 46/157 (29%), Positives = 63/157 (40%), Gaps = 2/157 (1%)
 Frame = +1

Query: 58  NAASAAPFTPSRSLSSPAYDLPLLSADDEAVVSSAFSILRELRSKRRWTFLKSVHHPTGF 237
           N+     F+ S S SSP  D    S   +  +S+  S+L   RSK RW FL S+  P GF
Sbjct: 15  NSTVHLQFSSSFSSSSPPTDP---SPSTKPSISTVVSVLTHQRSKSRWRFLNSLC-PNGF 70

Query: 238 TPVQFXXXXXXXXXXXXXXXGFFLFTRRHSLCNHDSLSFXXXXXXXXXXXXXXXXXXXXQ 417
            P +F                FFL+T+  SLCNH+ +S+                    Q
Sbjct: 71  DPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGRLRTHAKDVIQ 130

Query: 418 AAIR--XXXXXXXXXXXXXXXXXXPPEIFKTLAKTYR 522
            AIR                    P ++F+TL KTY+
Sbjct: 131 TAIRAAQLEDSDNYSKTERFSPSRPLKLFETLVKTYK 167


>ref|XP_006349623.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like isoform X1 [Solanum tuberosum]
           gi|565365876|ref|XP_006349624.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g15980-like isoform X2 [Solanum tuberosum]
          Length = 493

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 53/177 (29%), Positives = 69/177 (38%), Gaps = 1/177 (0%)
 Frame = +1

Query: 4   ASAAPFTPSRSLSSPTFRNAASAAPFTPSRSLSSPAYDLPLLSADDEAVVSSAFSILREL 183
           A  +  T    LS P  ++  S    T S S SSP        ++DE +VS+A +IL+  
Sbjct: 2   AMLSSLTRRTVLSIPLTKHPLS----TFSASTSSPP------QSEDETLVSAATTILKHH 51

Query: 184 RSKRRWTFLKSVHHPT-GFTPVQFXXXXXXXXXXXXXXXGFFLFTRRHSLCNHDSLSFXX 360
           RSK RW+ + S+  PT GFTP Q                 FF FT   S+C H   S+  
Sbjct: 52  RSKSRWSEILSLAPPTSGFTPSQVSKIILQLRNTPHLALRFFNFTVHRSICCHSVSSYAT 111

Query: 361 XXXXXXXXXXXXXXXXXXQAAIRXXXXXXXXXXXXXXXXXXPPEIFKTLAKTYRVFD 531
                             + AIR                  PP IF+ L KTYR  D
Sbjct: 112 IIHILSRSRLKSQALELIKCAIR------KFPDIHKPDSSNPPRIFEILVKTYRSCD 162


>ref|XP_004248897.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Solanum lycopersicum]
          Length = 495

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 49/167 (29%), Positives = 66/167 (39%), Gaps = 1/167 (0%)
 Frame = +1

Query: 34  SLSSPTFRNAASAAPFTPSRSLSSPAYDLPLLSADDEAVVSSAFSILRELRSKRRWTFLK 213
           SL+  T  + A       + S S+ A   PL  ++DE +VS+A +IL+  RSK RW+ + 
Sbjct: 6   SLTRRTVLSIALTKHSLSTHSASASASSPPL--SEDERLVSAATTILKHHRSKSRWSEIL 63

Query: 214 SVHHPT-GFTPVQFXXXXXXXXXXXXXXXGFFLFTRRHSLCNHDSLSFXXXXXXXXXXXX 390
           S+  PT GFTP Q                 FF FT   S+C H   S+            
Sbjct: 64  SLAPPTSGFTPSQVSKIILQLRNTPHLALRFFNFTVHRSICCHSLSSYATIIHILSRSRL 123

Query: 391 XXXXXXXXQAAIRXXXXXXXXXXXXXXXXXXPPEIFKTLAKTYRVFD 531
                   + AIR                  PP  F+ L KTYR  D
Sbjct: 124 KPHALELIKCAIR------KFPDTHQPDLSNPPRFFEILVKTYRSCD 164