BLASTX nr result

ID: Zingiber25_contig00038199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00038199
         (674 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002455597.1| hypothetical protein SORBIDRAFT_03g013670 [S...    59   2e-06

>ref|XP_002455597.1| hypothetical protein SORBIDRAFT_03g013670 [Sorghum bicolor]
           gi|241927572|gb|EES00717.1| hypothetical protein
           SORBIDRAFT_03g013670 [Sorghum bicolor]
          Length = 245

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 47/134 (35%), Positives = 61/134 (45%), Gaps = 11/134 (8%)
 Frame = +1

Query: 136 KPRIGKEIAILKPSNGGDGVLKGLGFVGTVRPLCLQGDHRSQSXXXXXXXXXXSGHEAFH 315
           K  I  +    KP+  GD        V ++RPL L+G    Q              + +H
Sbjct: 106 KRAIAADAVDYKPA--GDESPSWKNIVDSMRPLRLRG----QELEYYPPPPPLGHADVYH 159

Query: 316 DVCSPPHAPSPSHED-----CISRYASAEDLQALDDPAVEE---GSSGGGDG---APKVV 462
           DV  PP +P+ S  +       SRYASA+DL  +D    EE    + GG DG    P  +
Sbjct: 160 DVILPPPSPARSGFEFEEVGMTSRYASADDLHQMDSADDEEVALAAEGGNDGDSSCPHAI 219

Query: 463 DEWAEEFIAKFYHQ 504
           D  AEEFIAKFY Q
Sbjct: 220 DMQAEEFIAKFYEQ 233


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