BLASTX nr result
ID: Zingiber25_contig00038045
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00038045
(703 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY15342.1| RING/U-box superfamily protein, putative [Theobro... 80 6e-13
ref|XP_006435418.1| hypothetical protein CICLE_v10004041mg [Citr... 79 1e-12
gb|EOX90617.1| Basic helix-loop-helix DNA-binding superfamily pr... 78 2e-12
ref|XP_002306993.2| hypothetical protein POPTR_0005s27660g [Popu... 77 4e-12
ref|XP_002510714.1| protein with unknown function [Ricinus commu... 77 4e-12
ref|NP_173506.1| RING-H2 finger protein ATL80 [Arabidopsis thali... 77 5e-12
ref|XP_002307200.1| hypothetical protein POPTR_0005s10190g [Popu... 77 5e-12
ref|XP_006416360.1| hypothetical protein EUTSA_v10009964mg [Eutr... 77 7e-12
ref|XP_004985867.1| PREDICTED: RING-H2 finger protein ATL8-like ... 77 7e-12
ref|XP_006303328.1| hypothetical protein CARUB_v10010177mg [Caps... 77 7e-12
ref|XP_004238452.1| PREDICTED: RING-H2 finger protein ATL80-like... 77 7e-12
ref|XP_002890411.1| zinc finger family protein [Arabidopsis lyra... 77 7e-12
gb|EPS68943.1| hypothetical protein M569_05824 [Genlisea aurea] 76 9e-12
ref|XP_002532473.1| protein with unknown function [Ricinus commu... 76 9e-12
ref|XP_002301903.1| zinc finger family protein [Populus trichoca... 76 9e-12
ref|XP_002276539.1| PREDICTED: RING-H2 finger protein ATL80 [Vit... 76 9e-12
gb|ABK56013.1| zinc finger protein [Brassica rapa] 76 9e-12
ref|XP_006342165.1| PREDICTED: RING-H2 finger protein ATL80-like... 76 1e-11
gb|EMJ03749.1| hypothetical protein PRUPE_ppa011201mg [Prunus pe... 76 1e-11
ref|XP_002266865.1| PREDICTED: RING-H2 finger protein ATL80-like... 76 1e-11
>gb|EOY15342.1| RING/U-box superfamily protein, putative [Theobroma cacao]
Length = 193
Score = 80.1 bits (196), Expect = 6e-13
Identities = 38/72 (52%), Positives = 47/72 (65%)
Frame = +2
Query: 359 GDRVRVLPQCGHGFHAVCVDMWLGSHQSCPSCRRILVVPPSNRDCDDGEPSSAGEYSPGV 538
GD +RVLPQCGHGFH C+DMWLGSH SCPSCR+ILVV ++ C G P S
Sbjct: 119 GDEIRVLPQCGHGFHVACIDMWLGSHSSCPSCRQILVVARCHK-C-GGLPGPGASTSGTD 176
Query: 539 P*ASMSLKEDQI 574
A + +ED++
Sbjct: 177 TEARLKEREDEV 188
>ref|XP_006435418.1| hypothetical protein CICLE_v10004041mg [Citrus clementina]
gi|568839917|ref|XP_006473922.1| PREDICTED: RING-H2
finger protein ATL80-like [Citrus sinensis]
gi|557537540|gb|ESR48658.1| hypothetical protein
CICLE_v10004041mg [Citrus clementina]
Length = 198
Score = 79.0 bits (193), Expect = 1e-12
Identities = 35/61 (57%), Positives = 41/61 (67%)
Frame = +2
Query: 356 DGDRVRVLPQCGHGFHAVCVDMWLGSHQSCPSCRRILVVPPSNRDCDDGEPSSAGEYSPG 535
+GD +RVLPQCGHGFH C+D WLGSH SCPSCR+ILVV + C SS+ G
Sbjct: 115 NGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVARCQK-CGGFPASSSSSSGAG 173
Query: 536 V 538
V
Sbjct: 174 V 174
>gb|EOX90617.1| Basic helix-loop-helix DNA-binding superfamily protein isoform 1
[Theobroma cacao] gi|508698722|gb|EOX90618.1| Basic
helix-loop-helix-containing protein, putative isoform 1
[Theobroma cacao]
Length = 185
Score = 78.2 bits (191), Expect = 2e-12
Identities = 39/75 (52%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Frame = +2
Query: 356 DGDRVRVLPQCGHGFHAVCVDMWLGSHQSCPSCRRILVVPPSNRDCDDGEPSSAGEYSPG 535
+GD +RVLPQCGHGFH CVD WLGSH SCPSCR+ILVV ++ G++ PG
Sbjct: 110 EGDEIRVLPQCGHGFHVGCVDTWLGSHSSCPSCRQILVVARCHK---------CGQFPPG 160
Query: 536 ----VP*ASMSLKED 568
V A M ED
Sbjct: 161 TGTAVSEAEMKALED 175
>ref|XP_002306993.2| hypothetical protein POPTR_0005s27660g [Populus trichocarpa]
gi|550339878|gb|EEE93989.2| hypothetical protein
POPTR_0005s27660g [Populus trichocarpa]
Length = 194
Score = 77.4 bits (189), Expect = 4e-12
Identities = 35/59 (59%), Positives = 41/59 (69%)
Frame = +2
Query: 359 GDRVRVLPQCGHGFHAVCVDMWLGSHQSCPSCRRILVVPPSNRDCDDGEPSSAGEYSPG 535
GD +RVLPQCGHGFH C+D WLGSH SCPSCR+IL+V + C G PS + S G
Sbjct: 117 GDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILMVDRCQK-C-GGLPSGSSSISGG 173
>ref|XP_002510714.1| protein with unknown function [Ricinus communis]
gi|223551415|gb|EEF52901.1| protein with unknown
function [Ricinus communis]
Length = 194
Score = 77.4 bits (189), Expect = 4e-12
Identities = 40/70 (57%), Positives = 46/70 (65%)
Frame = +2
Query: 359 GDRVRVLPQCGHGFHAVCVDMWLGSHQSCPSCRRILVVPPSNRDCDDGEPSSAGEYSPGV 538
GD +RVLPQCGHGFH C+D WLGSH SCPSCR+ILVV + C G P+SA G
Sbjct: 124 GDEIRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVARCQK-C-GGLPASAS--GGGE 179
Query: 539 P*ASMSLKED 568
A M +ED
Sbjct: 180 SEARMKERED 189
>ref|NP_173506.1| RING-H2 finger protein ATL80 [Arabidopsis thaliana]
gi|68565308|sp|Q9LM69.1|ATL80_ARATH RecName:
Full=RING-H2 finger protein ATL80
gi|8886938|gb|AAF80624.1|AC069251_17 F2D10.34
[Arabidopsis thaliana] gi|15027985|gb|AAK76523.1|
unknown protein [Arabidopsis thaliana]
gi|332191907|gb|AEE30028.1| RING-H2 finger protein ATL80
[Arabidopsis thaliana]
Length = 197
Score = 77.0 bits (188), Expect = 5e-12
Identities = 36/71 (50%), Positives = 46/71 (64%)
Frame = +2
Query: 359 GDRVRVLPQCGHGFHAVCVDMWLGSHQSCPSCRRILVVPPSNRDCDDGEPSSAGEYSPGV 538
GD +RVLPQCGHGFH C+D WLGSH SCPSCR+ILVV ++ C G P S+
Sbjct: 121 GDELRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVARCHK-C-GGLPGSSSSGLESE 178
Query: 539 P*ASMSLKEDQ 571
P + +K+ +
Sbjct: 179 PEIEIRIKQGE 189
>ref|XP_002307200.1| hypothetical protein POPTR_0005s10190g [Populus trichocarpa]
gi|118482335|gb|ABK93092.1| unknown [Populus
trichocarpa] gi|222856649|gb|EEE94196.1| hypothetical
protein POPTR_0005s10190g [Populus trichocarpa]
Length = 200
Score = 77.0 bits (188), Expect = 5e-12
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +2
Query: 356 DGDRVRVLPQCGHGFHAVCVDMWLGSHQSCPSCRRILVV 472
+GD VRVLPQCGHGFH C+D WLGSH SCPSCR+ILVV
Sbjct: 110 EGDEVRVLPQCGHGFHVGCIDKWLGSHSSCPSCRQILVV 148
>ref|XP_006416360.1| hypothetical protein EUTSA_v10009964mg [Eutrema salsugineum]
gi|557094131|gb|ESQ34713.1| hypothetical protein
EUTSA_v10009964mg [Eutrema salsugineum]
Length = 200
Score = 76.6 bits (187), Expect = 7e-12
Identities = 36/62 (58%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Frame = +2
Query: 359 GDRVRVLPQCGHGFHAVCVDMWLGSHQSCPSCRRILVVPPSNRDCD--DGEPSSAGEYSP 532
GD +RVLPQCGHGFH C+D WLGSH SCPSCR+ILVV ++ C G SS E P
Sbjct: 124 GDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVARCHK-CGGLPGSSSSGPESEP 182
Query: 533 GV 538
+
Sbjct: 183 EI 184
>ref|XP_004985867.1| PREDICTED: RING-H2 finger protein ATL8-like [Setaria italica]
Length = 224
Score = 76.6 bits (187), Expect = 7e-12
Identities = 35/66 (53%), Positives = 42/66 (63%), Gaps = 13/66 (19%)
Frame = +2
Query: 362 DRVRVLPQCGHGFHAVCVDMWLGSHQSCPSCRRILVV------PPSNRDC-------DDG 502
+ +RVLPQCGHGFH CVD WLG+H SCPSCRR+LVV PP + C +D
Sbjct: 132 EEIRVLPQCGHGFHVACVDTWLGAHSSCPSCRRVLVVDDPPKRPPDPKRCRKCEAAMEDA 191
Query: 503 EPSSAG 520
SS+G
Sbjct: 192 SSSSSG 197
>ref|XP_006303328.1| hypothetical protein CARUB_v10010177mg [Capsella rubella]
gi|482572039|gb|EOA36226.1| hypothetical protein
CARUB_v10010177mg [Capsella rubella]
Length = 234
Score = 76.6 bits (187), Expect = 7e-12
Identities = 37/72 (51%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Frame = +2
Query: 359 GDRVRVLPQCGHGFHAVCVDMWLGSHQSCPSCRRILVVPPSNRDCDDGEPSSAGEYSP-G 535
GD +RVLPQCGHGFH C+D WLGSH SCPSCR+ILVV ++ C SS P
Sbjct: 156 GDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVARCHK-CGGLPGSSTSSPEPES 214
Query: 536 VP*ASMSLKEDQ 571
VP + +K+ +
Sbjct: 215 VPEIEIRIKQGE 226
>ref|XP_004238452.1| PREDICTED: RING-H2 finger protein ATL80-like [Solanum lycopersicum]
Length = 183
Score = 76.6 bits (187), Expect = 7e-12
Identities = 33/58 (56%), Positives = 42/58 (72%)
Frame = +2
Query: 359 GDRVRVLPQCGHGFHAVCVDMWLGSHQSCPSCRRILVVPPSNRDCDDGEPSSAGEYSP 532
GD +RVLPQCGHGFH C+D WLGSH SCPSCR+ILVV ++ C + +S+ +P
Sbjct: 108 GDEIRVLPQCGHGFHVGCIDTWLGSHSSCPSCRQILVVTRCHK-CGELPVASSSSSAP 164
>ref|XP_002890411.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297336253|gb|EFH66670.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 197
Score = 76.6 bits (187), Expect = 7e-12
Identities = 36/62 (58%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Frame = +2
Query: 359 GDRVRVLPQCGHGFHAVCVDMWLGSHQSCPSCRRILVVPPSNRDCD--DGEPSSAGEYSP 532
GD +RVLPQCGHGFH C+D WLGSH SCPSCR+ILVV ++ C G SS E P
Sbjct: 121 GDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVARCHK-CGGLPGSSSSGPESEP 179
Query: 533 GV 538
+
Sbjct: 180 EI 181
>gb|EPS68943.1| hypothetical protein M569_05824 [Genlisea aurea]
Length = 198
Score = 76.3 bits (186), Expect = 9e-12
Identities = 33/54 (61%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Frame = +2
Query: 359 GDRVRVLPQCGHGFHAVCVDMWLGSHQSCPSCRRILVVPP-SNRDCDDGEPSSA 517
G+ +RVLPQCGHGFH VC+D WLGSH SCPSCR+ILV N C P +A
Sbjct: 121 GEELRVLPQCGHGFHVVCIDTWLGSHSSCPSCRQILVAARCQNCQCSQPPPVAA 174
>ref|XP_002532473.1| protein with unknown function [Ricinus communis]
gi|223527798|gb|EEF29897.1| protein with unknown
function [Ricinus communis]
Length = 204
Score = 76.3 bits (186), Expect = 9e-12
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +2
Query: 359 GDRVRVLPQCGHGFHAVCVDMWLGSHQSCPSCRRILVV 472
GD VRVLPQCGHGFH C+D WLGSH SCPSCR+ILVV
Sbjct: 111 GDEVRVLPQCGHGFHVGCIDTWLGSHSSCPSCRQILVV 148
>ref|XP_002301903.1| zinc finger family protein [Populus trichocarpa]
gi|222843629|gb|EEE81176.1| zinc finger family protein
[Populus trichocarpa]
Length = 200
Score = 76.3 bits (186), Expect = 9e-12
Identities = 30/38 (78%), Positives = 33/38 (86%)
Frame = +2
Query: 359 GDRVRVLPQCGHGFHAVCVDMWLGSHQSCPSCRRILVV 472
GD +RVLPQCGHGFH C+D WLGSH SCPSCR+ILVV
Sbjct: 117 GDEIRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVV 154
>ref|XP_002276539.1| PREDICTED: RING-H2 finger protein ATL80 [Vitis vinifera]
gi|296082570|emb|CBI21575.3| unnamed protein product
[Vitis vinifera]
Length = 182
Score = 76.3 bits (186), Expect = 9e-12
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = +2
Query: 356 DGDRVRVLPQCGHGFHAVCVDMWLGSHQSCPSCRRILVV 472
+GD +RVLPQCGHGFH +CVD WL SH SCPSCR+ILVV
Sbjct: 108 EGDEIRVLPQCGHGFHVLCVDTWLSSHSSCPSCRQILVV 146
>gb|ABK56013.1| zinc finger protein [Brassica rapa]
Length = 196
Score = 76.3 bits (186), Expect = 9e-12
Identities = 34/56 (60%), Positives = 41/56 (73%)
Frame = +2
Query: 356 DGDRVRVLPQCGHGFHAVCVDMWLGSHQSCPSCRRILVVPPSNRDCDDGEPSSAGE 523
+GD +RVLPQCGHGFH C+D WLGSH SCPSCR+ILVV ++ C SS+ E
Sbjct: 123 NGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVARCHK-CGGLPGSSSSE 177
>ref|XP_006342165.1| PREDICTED: RING-H2 finger protein ATL80-like [Solanum tuberosum]
Length = 180
Score = 75.9 bits (185), Expect = 1e-11
Identities = 30/38 (78%), Positives = 33/38 (86%)
Frame = +2
Query: 359 GDRVRVLPQCGHGFHAVCVDMWLGSHQSCPSCRRILVV 472
GD +RVLPQCGHGFH C+D WLGSH SCPSCR+ILVV
Sbjct: 106 GDEIRVLPQCGHGFHVGCIDTWLGSHSSCPSCRQILVV 143
>gb|EMJ03749.1| hypothetical protein PRUPE_ppa011201mg [Prunus persica]
Length = 220
Score = 75.9 bits (185), Expect = 1e-11
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +2
Query: 356 DGDRVRVLPQCGHGFHAVCVDMWLGSHQSCPSCRRILVV 472
+GD +RVLPQCGH FH CVDMWLGSH SCPSCR+ILVV
Sbjct: 119 EGDEIRVLPQCGHVFHVGCVDMWLGSHSSCPSCRQILVV 157
>ref|XP_002266865.1| PREDICTED: RING-H2 finger protein ATL80-like [Vitis vinifera]
Length = 153
Score = 75.9 bits (185), Expect = 1e-11
Identities = 30/38 (78%), Positives = 33/38 (86%)
Frame = +2
Query: 359 GDRVRVLPQCGHGFHAVCVDMWLGSHQSCPSCRRILVV 472
GD +RVLPQCGHGFH C+D WLGSH SCPSCR+ILVV
Sbjct: 111 GDEIRVLPQCGHGFHVGCIDTWLGSHSSCPSCRQILVV 148