BLASTX nr result
ID: Zingiber25_contig00038002
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00038002
(626 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004293118.1| PREDICTED: pentatricopeptide repeat-containi... 117 3e-24
ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containi... 115 1e-23
emb|CBI24422.3| unnamed protein product [Vitis vinifera] 115 1e-23
gb|EXC37761.1| hypothetical protein L484_001219 [Morus notabilis] 114 2e-23
ref|XP_002299777.1| pentatricopeptide repeat-containing family p... 114 3e-23
gb|ESW22027.1| hypothetical protein PHAVU_005G120400g [Phaseolus... 113 5e-23
ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 111 1e-22
ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containi... 111 1e-22
ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containi... 107 4e-21
dbj|BAK01831.1| predicted protein [Hordeum vulgare subsp. vulgare] 104 2e-20
ref|XP_006481538.1| PREDICTED: pentatricopeptide repeat-containi... 103 3e-20
ref|XP_006424118.1| hypothetical protein CICLE_v10028449mg [Citr... 103 3e-20
dbj|BAD16914.1| pentatricopeptide (PPR) repeat-containing protei... 102 7e-20
ref|NP_001048246.2| Os02g0769900 [Oryza sativa Japonica Group] g... 102 7e-20
gb|EAY87679.1| hypothetical protein OsI_09093 [Oryza sativa Indi... 102 7e-20
ref|XP_004954053.1| PREDICTED: pentatricopeptide repeat-containi... 102 9e-20
ref|XP_002454621.1| hypothetical protein SORBIDRAFT_04g034420 [S... 102 9e-20
gb|EOY33313.1| Tetratricopeptide repeat (TPR)-like superfamily p... 101 2e-19
ref|XP_006647969.1| PREDICTED: pentatricopeptide repeat-containi... 101 2e-19
gb|AFW64322.1| hypothetical protein ZEAMMB73_176484 [Zea mays] 101 2e-19
>ref|XP_004293118.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 504
Score = 117 bits (293), Expect = 3e-24
Identities = 52/84 (61%), Positives = 67/84 (79%)
Frame = +2
Query: 2 LDPECDSNYILLSNTYAAFGWWDGASEIRNMMKAIGVKKTPGFSNIEIDCEIHEFVAGDK 181
LDP DSNY+LL+N YAA G WDGAS++R MK +G++KTPGFS++EIDC+IHEFVAGDK
Sbjct: 413 LDPGVDSNYVLLANIYAADGRWDGASKVRKTMKDLGIQKTPGFSSVEIDCDIHEFVAGDK 472
Query: 182 SHPQFDNIYAMLNLLHCEMEICSY 253
SH + IY+ L LL E+++C Y
Sbjct: 473 SHVDAEYIYSTLELLSFELKLCGY 496
>ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 115 bits (287), Expect = 1e-23
Identities = 53/84 (63%), Positives = 65/84 (77%)
Frame = +2
Query: 2 LDPECDSNYILLSNTYAAFGWWDGASEIRNMMKAIGVKKTPGFSNIEIDCEIHEFVAGDK 181
+DP DSNY+LLSN YAA G WDGAS++R MKA+G+ K PGFS+IE+D IHEFVAGDK
Sbjct: 422 VDPGSDSNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPGFSSIEMDGSIHEFVAGDK 481
Query: 182 SHPQFDNIYAMLNLLHCEMEICSY 253
+H + NIYAML+ L E+ IC Y
Sbjct: 482 THVETQNIYAMLDHLFLELRICGY 505
>emb|CBI24422.3| unnamed protein product [Vitis vinifera]
Length = 502
Score = 115 bits (287), Expect = 1e-23
Identities = 53/84 (63%), Positives = 65/84 (77%)
Frame = +2
Query: 2 LDPECDSNYILLSNTYAAFGWWDGASEIRNMMKAIGVKKTPGFSNIEIDCEIHEFVAGDK 181
+DP DSNY+LLSN YAA G WDGAS++R MKA+G+ K PGFS+IE+D IHEFVAGDK
Sbjct: 406 VDPGSDSNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPGFSSIEMDGSIHEFVAGDK 465
Query: 182 SHPQFDNIYAMLNLLHCEMEICSY 253
+H + NIYAML+ L E+ IC Y
Sbjct: 466 THVETQNIYAMLDHLFLELRICGY 489
>gb|EXC37761.1| hypothetical protein L484_001219 [Morus notabilis]
Length = 508
Score = 114 bits (285), Expect = 2e-23
Identities = 53/84 (63%), Positives = 65/84 (77%)
Frame = +2
Query: 2 LDPECDSNYILLSNTYAAFGWWDGASEIRNMMKAIGVKKTPGFSNIEIDCEIHEFVAGDK 181
LDP DSNY+LL+N YAA G WDGA ++R MKA+G++KTPGFS+IEIDC IHEFVAGDK
Sbjct: 415 LDPGGDSNYVLLANMYAAVGKWDGAGKVRKTMKALGIQKTPGFSSIEIDCNIHEFVAGDK 474
Query: 182 SHPQFDNIYAMLNLLHCEMEICSY 253
SH + IY+ML LL E++ Y
Sbjct: 475 SHVDKNCIYSMLELLSSELKASGY 498
>ref|XP_002299777.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222847035|gb|EEE84582.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 439
Score = 114 bits (284), Expect = 3e-23
Identities = 52/84 (61%), Positives = 65/84 (77%)
Frame = +2
Query: 2 LDPECDSNYILLSNTYAAFGWWDGASEIRNMMKAIGVKKTPGFSNIEIDCEIHEFVAGDK 181
LDP DSNY+LLSN YAA G WDGA + R MKA+G++K PGFS+IEI C+IHEFVAGDK
Sbjct: 343 LDPGADSNYVLLSNIYAAVGRWDGACKQRMTMKALGIQKKPGFSSIEIGCDIHEFVAGDK 402
Query: 182 SHPQFDNIYAMLNLLHCEMEICSY 253
SH + ++IY+ML LL + +C Y
Sbjct: 403 SHDKAEDIYSMLELLSFDQALCGY 426
>gb|ESW22027.1| hypothetical protein PHAVU_005G120400g [Phaseolus vulgaris]
Length = 514
Score = 113 bits (282), Expect = 5e-23
Identities = 51/84 (60%), Positives = 66/84 (78%)
Frame = +2
Query: 2 LDPECDSNYILLSNTYAAFGWWDGASEIRNMMKAIGVKKTPGFSNIEIDCEIHEFVAGDK 181
LDP DSNY+LLSN YAA G WDGA+++R +MK G++K PGFS+IEID IH+FVAGDK
Sbjct: 418 LDPGKDSNYVLLSNIYAAVGKWDGANKVRRIMKERGIQKIPGFSSIEIDSSIHKFVAGDK 477
Query: 182 SHPQFDNIYAMLNLLHCEMEICSY 253
SH + D++YA L LL E+++C Y
Sbjct: 478 SHEENDHVYAALELLSFELQLCGY 501
>ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05750, chloroplastic-like [Cucumis sativus]
Length = 525
Score = 111 bits (278), Expect = 1e-22
Identities = 52/92 (56%), Positives = 68/92 (73%)
Frame = +2
Query: 2 LDPECDSNYILLSNTYAAFGWWDGASEIRNMMKAIGVKKTPGFSNIEIDCEIHEFVAGDK 181
LDPE D+ Y+LLSN YAA G WDGA+ +R MKA GV+K PG+S++EID ++HEFVAGD
Sbjct: 425 LDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFVAGDN 484
Query: 182 SHPQFDNIYAMLNLLHCEMEICSYNQKSTKVL 277
H DNIY+ML+LL E+++C Y S +L
Sbjct: 485 YHADADNIYSMLDLLCHELKVCGYVPGSDTIL 516
>ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Cucumis sativus]
Length = 525
Score = 111 bits (278), Expect = 1e-22
Identities = 52/92 (56%), Positives = 68/92 (73%)
Frame = +2
Query: 2 LDPECDSNYILLSNTYAAFGWWDGASEIRNMMKAIGVKKTPGFSNIEIDCEIHEFVAGDK 181
LDPE D+ Y+LLSN YAA G WDGA+ +R MKA GV+K PG+S++EID ++HEFVAGD
Sbjct: 425 LDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFVAGDN 484
Query: 182 SHPQFDNIYAMLNLLHCEMEICSYNQKSTKVL 277
H DNIY+ML+LL E+++C Y S +L
Sbjct: 485 YHADADNIYSMLDLLCHELKVCGYVPGSDTIL 516
>ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Glycine max]
Length = 521
Score = 107 bits (266), Expect = 4e-21
Identities = 49/84 (58%), Positives = 63/84 (75%)
Frame = +2
Query: 2 LDPECDSNYILLSNTYAAFGWWDGASEIRNMMKAIGVKKTPGFSNIEIDCEIHEFVAGDK 181
LD DSNY+LLSN YAA G WDGA+++R MK G++K PGFS+IEID IH+FV+GDK
Sbjct: 425 LDSGGDSNYVLLSNIYAAVGKWDGANKVRRRMKERGIQKKPGFSSIEIDSSIHKFVSGDK 484
Query: 182 SHPQFDNIYAMLNLLHCEMEICSY 253
SH + D+IYA L L E+++C Y
Sbjct: 485 SHEEKDHIYAALEFLSFELQLCGY 508
>dbj|BAK01831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 484
Score = 104 bits (259), Expect = 2e-20
Identities = 49/78 (62%), Positives = 59/78 (75%)
Frame = +2
Query: 5 DPECDSNYILLSNTYAAFGWWDGASEIRNMMKAIGVKKTPGFSNIEIDCEIHEFVAGDKS 184
DP DSNY+LLSN YAA G WDGA ++R +MKA GVKK PG S +EID ++HEFV GD+S
Sbjct: 402 DPGGDSNYVLLSNIYAATGKWDGAGKVRGLMKARGVKKRPGRSAVEIDGDVHEFVCGDRS 461
Query: 185 HPQFDNIYAMLNLLHCEM 238
HPQ D ++ ML LL EM
Sbjct: 462 HPQADEVFDMLGLLSHEM 479
>ref|XP_006481538.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Citrus sinensis]
Length = 509
Score = 103 bits (258), Expect = 3e-20
Identities = 47/84 (55%), Positives = 63/84 (75%)
Frame = +2
Query: 2 LDPECDSNYILLSNTYAAFGWWDGASEIRNMMKAIGVKKTPGFSNIEIDCEIHEFVAGDK 181
LDP DSNY+LL+N YAA G WDGA +IR MK G++K PG S+IEI IHEF+AGD+
Sbjct: 413 LDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDR 472
Query: 182 SHPQFDNIYAMLNLLHCEMEICSY 253
SH + ++IY+ML LL ++++C Y
Sbjct: 473 SHIESEHIYSMLELLSFDLKLCGY 496
>ref|XP_006424118.1| hypothetical protein CICLE_v10028449mg [Citrus clementina]
gi|557526052|gb|ESR37358.1| hypothetical protein
CICLE_v10028449mg [Citrus clementina]
Length = 445
Score = 103 bits (258), Expect = 3e-20
Identities = 47/84 (55%), Positives = 63/84 (75%)
Frame = +2
Query: 2 LDPECDSNYILLSNTYAAFGWWDGASEIRNMMKAIGVKKTPGFSNIEIDCEIHEFVAGDK 181
LDP DSNY+LL+N YAA G WDGA +IR MK G++K PG S+IEI IHEF+AGD+
Sbjct: 343 LDPGVDSNYVLLANMYAAVGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDR 402
Query: 182 SHPQFDNIYAMLNLLHCEMEICSY 253
SH + ++IY+ML LL ++++C Y
Sbjct: 403 SHIESEHIYSMLELLSFDLKLCGY 426
>dbj|BAD16914.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group] gi|215704291|dbj|BAG93131.1|
unnamed protein product [Oryza sativa Japonica Group]
Length = 527
Score = 102 bits (255), Expect = 7e-20
Identities = 47/79 (59%), Positives = 62/79 (78%)
Frame = +2
Query: 2 LDPECDSNYILLSNTYAAFGWWDGASEIRNMMKAIGVKKTPGFSNIEIDCEIHEFVAGDK 181
LDP D+NY+LLSN YAA G WDGA ++R++MKA G++K PG+S +EID ++HEFV+GD+
Sbjct: 434 LDPGGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGLRKRPGYSAVEIDGDVHEFVSGDR 493
Query: 182 SHPQFDNIYAMLNLLHCEM 238
SHPQ + I ML LL EM
Sbjct: 494 SHPQAEEISQMLGLLMHEM 512
>ref|NP_001048246.2| Os02g0769900 [Oryza sativa Japonica Group]
gi|46805413|dbj|BAD16915.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|255671273|dbj|BAF10160.2| Os02g0769900 [Oryza
sativa Japonica Group]
Length = 438
Score = 102 bits (255), Expect = 7e-20
Identities = 47/79 (59%), Positives = 62/79 (78%)
Frame = +2
Query: 2 LDPECDSNYILLSNTYAAFGWWDGASEIRNMMKAIGVKKTPGFSNIEIDCEIHEFVAGDK 181
LDP D+NY+LLSN YAA G WDGA ++R++MKA G++K PG+S +EID ++HEFV+GD+
Sbjct: 345 LDPGGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGLRKRPGYSAVEIDGDVHEFVSGDR 404
Query: 182 SHPQFDNIYAMLNLLHCEM 238
SHPQ + I ML LL EM
Sbjct: 405 SHPQAEEISQMLGLLMHEM 423
>gb|EAY87679.1| hypothetical protein OsI_09093 [Oryza sativa Indica Group]
Length = 493
Score = 102 bits (255), Expect = 7e-20
Identities = 47/79 (59%), Positives = 62/79 (78%)
Frame = +2
Query: 2 LDPECDSNYILLSNTYAAFGWWDGASEIRNMMKAIGVKKTPGFSNIEIDCEIHEFVAGDK 181
LDP D+NY+LLSN YAA G WDGA ++R++MKA G++K PG+S +EID ++HEFV+GD+
Sbjct: 400 LDPGGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGLRKRPGYSAVEIDGDVHEFVSGDR 459
Query: 182 SHPQFDNIYAMLNLLHCEM 238
SHPQ + I ML LL EM
Sbjct: 460 SHPQAEEISQMLGLLMHEM 478
>ref|XP_004954053.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Setaria italica]
Length = 496
Score = 102 bits (254), Expect = 9e-20
Identities = 48/95 (50%), Positives = 66/95 (69%)
Frame = +2
Query: 2 LDPECDSNYILLSNTYAAFGWWDGASEIRNMMKAIGVKKTPGFSNIEIDCEIHEFVAGDK 181
LDP D+NY+LLSN YAA G WDGA ++R++MKA G+KK PG+S +E+D ++HEFV+GD+
Sbjct: 402 LDPGGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGLKKRPGYSAVEVDGDVHEFVSGDR 461
Query: 182 SHPQFDNIYAMLNLLHCEMEICSYNQKSTKVLTDD 286
SH Q ++I ML LL EM Y++ D
Sbjct: 462 SHLQAESIGEMLGLLRHEMARYGYDEHGGSCFVGD 496
>ref|XP_002454621.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
gi|241934452|gb|EES07597.1| hypothetical protein
SORBIDRAFT_04g034420 [Sorghum bicolor]
Length = 496
Score = 102 bits (254), Expect = 9e-20
Identities = 50/95 (52%), Positives = 65/95 (68%)
Frame = +2
Query: 2 LDPECDSNYILLSNTYAAFGWWDGASEIRNMMKAIGVKKTPGFSNIEIDCEIHEFVAGDK 181
LDP D+NY+LLSN YAA G WDGA ++R++MKA GVKK PG S +EID ++HEFV+ D+
Sbjct: 402 LDPGGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGVKKRPGHSIVEIDGDVHEFVSSDR 461
Query: 182 SHPQFDNIYAMLNLLHCEMEICSYNQKSTKVLTDD 286
SHPQ + I ML LL EM + + + L D
Sbjct: 462 SHPQAEEIGQMLGLLRHEMAMYGCDDHGSSSLDGD 496
>gb|EOY33313.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 509
Score = 101 bits (252), Expect = 2e-19
Identities = 48/84 (57%), Positives = 63/84 (75%)
Frame = +2
Query: 2 LDPECDSNYILLSNTYAAFGWWDGASEIRNMMKAIGVKKTPGFSNIEIDCEIHEFVAGDK 181
LDP DSNY+LL+N YAA G W+GAS++R MKA+G++K PGFS+IEI +HEFVAGDK
Sbjct: 413 LDPGSDSNYVLLANIYAAVGRWEGASKVRRRMKALGIQKKPGFSSIEISGCVHEFVAGDK 472
Query: 182 SHPQFDNIYAMLNLLHCEMEICSY 253
SH + + IY ML LL ++ + Y
Sbjct: 473 SHLETECIYKMLELLCFDLLLSGY 496
>ref|XP_006647969.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Oryza brachyantha]
Length = 437
Score = 101 bits (251), Expect = 2e-19
Identities = 47/79 (59%), Positives = 61/79 (77%)
Frame = +2
Query: 2 LDPECDSNYILLSNTYAAFGWWDGASEIRNMMKAIGVKKTPGFSNIEIDCEIHEFVAGDK 181
LDP D+NY+LLSN YAA G WDGA ++RN+MKA G++K PG+S +E+D +HEFV+GD+
Sbjct: 345 LDPGGDANYVLLSNIYAAVGKWDGAGKVRNLMKARGLRKRPGYSAVEVDGGVHEFVSGDR 404
Query: 182 SHPQFDNIYAMLNLLHCEM 238
SHPQ + I ML LL EM
Sbjct: 405 SHPQAEEISHMLALLIHEM 423
>gb|AFW64322.1| hypothetical protein ZEAMMB73_176484 [Zea mays]
Length = 496
Score = 101 bits (251), Expect = 2e-19
Identities = 48/79 (60%), Positives = 60/79 (75%)
Frame = +2
Query: 2 LDPECDSNYILLSNTYAAFGWWDGASEIRNMMKAIGVKKTPGFSNIEIDCEIHEFVAGDK 181
LDP+ D+NY+LLSN YAA G WDGA ++R++MKA GVKK PG S +EID ++HEFV+GD+
Sbjct: 402 LDPQGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGVKKRPGHSTVEIDGDVHEFVSGDQ 461
Query: 182 SHPQFDNIYAMLNLLHCEM 238
SHP I ML LL EM
Sbjct: 462 SHPLAGEIGQMLGLLWHEM 480