BLASTX nr result

ID: Zingiber25_contig00037978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00037978
         (319 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006858992.1| hypothetical protein AMTR_s00068p00135100 [A...    63   4e-08
ref|XP_002267230.2| PREDICTED: uncharacterized protein LOC100259...    62   6e-08
gb|EOY32303.1| SC35-like splicing factor 33 [Theobroma cacao]          62   8e-08
gb|AFK42741.1| unknown [Lotus japonicus]                               62   8e-08
ref|XP_002285703.1| PREDICTED: uncharacterized protein LOC100263...    61   2e-07
ref|XP_004514153.1| PREDICTED: serine/arginine-rich splicing fac...    60   2e-07
ref|XP_006650131.1| PREDICTED: serine/arginine-rich splicing fac...    60   4e-07
ref|XP_004303370.1| PREDICTED: serine/arginine-rich splicing fac...    60   4e-07
ref|XP_004294999.1| PREDICTED: serine/arginine-rich splicing fac...    59   5e-07
gb|ESW17717.1| hypothetical protein PHAVU_007G262600g [Phaseolus...    59   7e-07
gb|ESW16303.1| hypothetical protein PHAVU_007G145300g [Phaseolus...    59   7e-07
ref|NP_001173443.1| Os03g0374575 [Oryza sativa Japonica Group] g...    59   7e-07
gb|ABF96206.1| RNA recognition motif family protein, expressed [...    59   7e-07
gb|AAP46199.1| putative splicing factor [Oryza sativa Japonica G...    59   7e-07
ref|XP_006586712.1| PREDICTED: uncharacterized protein LOC100816...    59   9e-07
ref|XP_006586711.1| PREDICTED: uncharacterized protein LOC100816...    59   9e-07
gb|ESW35836.1| hypothetical protein PHAVU_001G268900g [Phaseolus...    59   9e-07
gb|EMJ04106.1| hypothetical protein PRUPE_ppa016103mg [Prunus pe...    59   9e-07
ref|XP_003544854.1| PREDICTED: serine/arginine-rich splicing fac...    59   9e-07
ref|NP_001239716.1| uncharacterized protein LOC100816913 [Glycin...    59   9e-07

>ref|XP_006858992.1| hypothetical protein AMTR_s00068p00135100 [Amborella trichopoda]
           gi|548863104|gb|ERN20459.1| hypothetical protein
           AMTR_s00068p00135100 [Amborella trichopoda]
          Length = 211

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 31/50 (62%), Positives = 40/50 (80%), Gaps = 3/50 (6%)
 Frame = -3

Query: 170 RNWFSGNHVDLGYFQYVDPA---EAKYQMDRQILLGQESTVVFAEDNRKK 30
           R++++G     G+ QYVDPA   EAKY+MDRQILLG+E TVVFAE+NRK+
Sbjct: 70  RDYYTGEPRGFGFVQYVDPADAAEAKYRMDRQILLGRELTVVFAEENRKR 119


>ref|XP_002267230.2| PREDICTED: uncharacterized protein LOC100259677 [Vitis vinifera]
          Length = 225

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 31/59 (52%), Positives = 42/59 (71%), Gaps = 3/59 (5%)
 Frame = -3

Query: 170 RNWFSGNHVDLGYFQYVDPA---EAKYQMDRQILLGQESTVVFAEDNRKKALRDEGKRR 3
           R++++G     G+ QYVDPA   EAKYQMD Q+LLG+E TVVFAE+NRK+ +    + R
Sbjct: 69  RDYYTGEPRGFGFVQYVDPADAAEAKYQMDGQVLLGRELTVVFAEENRKRPVDMRARER 127


>gb|EOY32303.1| SC35-like splicing factor 33 [Theobroma cacao]
          Length = 269

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 31/50 (62%), Positives = 39/50 (78%), Gaps = 3/50 (6%)
 Frame = -3

Query: 170 RNWFSGNHVDLGYFQYVDPA---EAKYQMDRQILLGQESTVVFAEDNRKK 30
           +++++G     G+ QYVDPA   EAKYQMD QILLG+E TVVFAE+NRKK
Sbjct: 69  KDYYTGEPRGFGFVQYVDPADAAEAKYQMDGQILLGRELTVVFAEENRKK 118


>gb|AFK42741.1| unknown [Lotus japonicus]
          Length = 221

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 31/59 (52%), Positives = 41/59 (69%), Gaps = 3/59 (5%)
 Frame = -3

Query: 170 RNWFSGNHVDLGYFQYVDPAEA---KYQMDRQILLGQESTVVFAEDNRKKALRDEGKRR 3
           R++++GN    G+ QYVDPA+A   KY +D QILLG+E TVVFAE+NRKK      + R
Sbjct: 72  RDYYTGNPRGFGFVQYVDPADAADAKYHLDGQILLGRELTVVFAEENRKKPAEMRARER 130


>ref|XP_002285703.1| PREDICTED: uncharacterized protein LOC100263951 [Vitis vinifera]
          Length = 245

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 7/63 (11%)
 Frame = -3

Query: 170 RNWFSGNHVDLGYFQYVDPA---EAKYQMDRQILLGQESTVVFAEDNRKK----ALRDEG 12
           R++++G     G+ QYVDPA   EAKYQMD QIL G+E TVVFAE+NRKK      R+ G
Sbjct: 71  RDYYTGEPRGFGFVQYVDPADAAEAKYQMDGQILHGRELTVVFAEENRKKPSDMRARERG 130

Query: 11  KRR 3
           + R
Sbjct: 131 RGR 133


>ref|XP_004514153.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cicer
           arietinum]
          Length = 219

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
 Frame = -3

Query: 170 RNWFSGNHVDLGYFQYVDPAEA---KYQMDRQILLGQESTVVFAEDNRKKALRDEGKRR 3
           R++++G     G+ QYVDPA+A   KY MD QILLG+E TVVFAE+NRKK      + R
Sbjct: 71  RDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPQEMRARER 129


>ref|XP_006650131.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Oryza
           brachyantha]
          Length = 215

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 3/50 (6%)
 Frame = -3

Query: 170 RNWFSGNHVDLGYFQYVDP---AEAKYQMDRQILLGQESTVVFAEDNRKK 30
           R+++SG     G+ QY DP   A+AKY MD QILLG+E TVVFAE+NRKK
Sbjct: 70  RDYYSGEPRGFGFIQYYDPEDAADAKYHMDGQILLGREVTVVFAEENRKK 119


>ref|XP_004303370.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Fragaria
           vesca subsp. vesca]
          Length = 212

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 32/61 (52%), Positives = 43/61 (70%), Gaps = 7/61 (11%)
 Frame = -3

Query: 170 RNWFSGNHVDLGYFQYVDPAEA---KYQMDRQILLGQESTVVFAEDNRKK----ALRDEG 12
           R++++G+    G+ Q+VDPA+A   KY MD QILLG+E TVVFAE+NRKK      RD G
Sbjct: 73  RDYYTGDPRGFGFVQFVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPSEMRARDRG 132

Query: 11  K 9
           +
Sbjct: 133 R 133


>ref|XP_004294999.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Fragaria
           vesca subsp. vesca]
          Length = 261

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 29/50 (58%), Positives = 38/50 (76%), Gaps = 3/50 (6%)
 Frame = -3

Query: 170 RNWFSGNHVDLGYFQYVDPA---EAKYQMDRQILLGQESTVVFAEDNRKK 30
           ++++SG     G+ Q+VDPA   EAKYQMD  +LLG+E TVVFAE+NRKK
Sbjct: 72  KDYYSGQPRGFGFVQFVDPADAAEAKYQMDGHVLLGREVTVVFAEENRKK 121


>gb|ESW17717.1| hypothetical protein PHAVU_007G262600g [Phaseolus vulgaris]
          Length = 238

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 3/59 (5%)
 Frame = -3

Query: 170 RNWFSGNHVDLGYFQYVDPAEA---KYQMDRQILLGQESTVVFAEDNRKKALRDEGKRR 3
           R++++G+    G+ QYVDPA+A   K+ MD QILLG+E TVVFAE+NRKK      + R
Sbjct: 100 RDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARER 158


>gb|ESW16303.1| hypothetical protein PHAVU_007G145300g [Phaseolus vulgaris]
           gi|561017500|gb|ESW16304.1| hypothetical protein
           PHAVU_007G145300g [Phaseolus vulgaris]
          Length = 209

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 3/59 (5%)
 Frame = -3

Query: 170 RNWFSGNHVDLGYFQYVDPAEA---KYQMDRQILLGQESTVVFAEDNRKKALRDEGKRR 3
           R++++G+    G+ QYVDPA+A   K+ MD QILLG+E TVVFAE+NRKK      + R
Sbjct: 71  RDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARER 129


>ref|NP_001173443.1| Os03g0374575 [Oryza sativa Japonica Group]
           gi|255674538|dbj|BAH92171.1| Os03g0374575 [Oryza sativa
           Japonica Group]
          Length = 251

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
 Frame = -3

Query: 170 RNWFSGNHVDLGYFQYVDP---AEAKYQMDRQILLGQESTVVFAEDNRKKALRDEGKRR 3
           R++++G     G+ QY DP   A+AKY MD QILLG+E TVVFAE+NRKK      + R
Sbjct: 77  RDYYTGEPRGFGFIQYYDPEDAADAKYHMDGQILLGREVTVVFAEENRKKPSEMRARER 135


>gb|ABF96206.1| RNA recognition motif family protein, expressed [Oryza sativa
           Japonica Group]
          Length = 218

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
 Frame = -3

Query: 170 RNWFSGNHVDLGYFQYVDP---AEAKYQMDRQILLGQESTVVFAEDNRKKALRDEGKRR 3
           R++++G     G+ QY DP   A+AKY MD QILLG+E TVVFAE+NRKK      + R
Sbjct: 70  RDYYTGEPRGFGFIQYYDPEDAADAKYHMDGQILLGREVTVVFAEENRKKPSEMRARER 128


>gb|AAP46199.1| putative splicing factor [Oryza sativa Japonica Group]
           gi|108708412|gb|ABF96207.1| RNA recognition motif family
           protein, expressed [Oryza sativa Japonica Group]
           gi|218192921|gb|EEC75348.1| hypothetical protein
           OsI_11773 [Oryza sativa Indica Group]
           gi|222625002|gb|EEE59134.1| hypothetical protein
           OsJ_11026 [Oryza sativa Japonica Group]
          Length = 217

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
 Frame = -3

Query: 170 RNWFSGNHVDLGYFQYVDP---AEAKYQMDRQILLGQESTVVFAEDNRKKALRDEGKRR 3
           R++++G     G+ QY DP   A+AKY MD QILLG+E TVVFAE+NRKK      + R
Sbjct: 70  RDYYTGEPRGFGFIQYYDPEDAADAKYHMDGQILLGREVTVVFAEENRKKPSEMRARER 128


>ref|XP_006586712.1| PREDICTED: uncharacterized protein LOC100816913 isoform X2 [Glycine
           max]
          Length = 213

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/50 (58%), Positives = 38/50 (76%), Gaps = 3/50 (6%)
 Frame = -3

Query: 170 RNWFSGNHVDLGYFQYVDPAEA---KYQMDRQILLGQESTVVFAEDNRKK 30
           R++++G     G+ QYVDPA+A   KY MD +ILLG+E TVVFAE+NRKK
Sbjct: 81  RDYYTGEPRGFGFVQYVDPADAADAKYHMDGRILLGREITVVFAEENRKK 130


>ref|XP_006586711.1| PREDICTED: uncharacterized protein LOC100816913 isoform X1 [Glycine
           max]
          Length = 341

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/50 (58%), Positives = 38/50 (76%), Gaps = 3/50 (6%)
 Frame = -3

Query: 170 RNWFSGNHVDLGYFQYVDPAEA---KYQMDRQILLGQESTVVFAEDNRKK 30
           R++++G     G+ QYVDPA+A   KY MD +ILLG+E TVVFAE+NRKK
Sbjct: 209 RDYYTGEPRGFGFVQYVDPADAADAKYHMDGRILLGREITVVFAEENRKK 258


>gb|ESW35836.1| hypothetical protein PHAVU_001G268900g [Phaseolus vulgaris]
          Length = 242

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/50 (56%), Positives = 38/50 (76%), Gaps = 3/50 (6%)
 Frame = -3

Query: 170 RNWFSGNHVDLGYFQYVDPAEA---KYQMDRQILLGQESTVVFAEDNRKK 30
           +++++G     G+ QYVDPA+A   KY MD Q+LLG+E TVVFAE+NRKK
Sbjct: 72  KDYYTGEPRGFGFVQYVDPADAADAKYHMDGQVLLGRELTVVFAEENRKK 121


>gb|EMJ04106.1| hypothetical protein PRUPE_ppa016103mg [Prunus persica]
          Length = 180

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/50 (58%), Positives = 38/50 (76%), Gaps = 3/50 (6%)
 Frame = -3

Query: 170 RNWFSGNHVDLGYFQYVDPAEA---KYQMDRQILLGQESTVVFAEDNRKK 30
           R++++G     G+ Q+VDPA+A   KY MD QILLG+E TVVFAE+NRKK
Sbjct: 71  RDYYTGEPRGFGFVQFVDPADAADAKYHMDGQILLGREVTVVFAEENRKK 120


>ref|XP_003544854.1| PREDICTED: serine/arginine-rich splicing factor 33 isoform 1
           [Glycine max]
          Length = 249

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/50 (56%), Positives = 38/50 (76%), Gaps = 3/50 (6%)
 Frame = -3

Query: 170 RNWFSGNHVDLGYFQYVDPAEA---KYQMDRQILLGQESTVVFAEDNRKK 30
           +++++G     G+ QYVDPA+A   KY MD Q+LLG+E TVVFAE+NRKK
Sbjct: 74  KDYYTGEPRGFGFVQYVDPADAADAKYHMDGQVLLGRELTVVFAEENRKK 123


>ref|NP_001239716.1| uncharacterized protein LOC100816913 [Glycine max]
           gi|571475614|ref|XP_006586713.1| PREDICTED:
           uncharacterized protein LOC100816913 isoform X3 [Glycine
           max] gi|255645650|gb|ACU23319.1| unknown [Glycine max]
          Length = 205

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/50 (58%), Positives = 38/50 (76%), Gaps = 3/50 (6%)
 Frame = -3

Query: 170 RNWFSGNHVDLGYFQYVDPAEA---KYQMDRQILLGQESTVVFAEDNRKK 30
           R++++G     G+ QYVDPA+A   KY MD +ILLG+E TVVFAE+NRKK
Sbjct: 73  RDYYTGEPRGFGFVQYVDPADAADAKYHMDGRILLGREITVVFAEENRKK 122


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