BLASTX nr result

ID: Zingiber25_contig00037963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00037963
         (718 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004238490.1| PREDICTED: uncharacterized protein LOC101253...    64   4e-08
ref|XP_001769619.1| predicted protein [Physcomitrella patens] gi...    59   1e-06
gb|EXC12322.1| hypothetical protein L484_004470 [Morus notabilis]      57   8e-06

>ref|XP_004238490.1| PREDICTED: uncharacterized protein LOC101253281 [Solanum
           lycopersicum]
          Length = 1815

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 62/241 (25%), Positives = 101/241 (41%), Gaps = 7/241 (2%)
 Frame = -2

Query: 708 VDYESKPRRELQALCKQHGLPANLTNARMAENLASLLQANSEEIKPKG--CLKXXXXXXX 535
           +D+E+  R++LQALCK+HG+PANLTN  MA  L+SLL+ N E+   +G  CLK       
Sbjct: 1   MDFENMKRKQLQALCKEHGIPANLTNLEMANKLSSLLKVNDEKPLTRGRSCLKMLDENES 60

Query: 534 XXXXGRLLPKKVSFSLHEVGVRALPEXXXXXXRKSVVGFAPKEVTEGALEAKIELEVRKT 355
                ++  KKV FS                           EV E    A+++   R+ 
Sbjct: 61  DAVNRKV--KKVKFS------------------------PDNEVIEFTRSAQVKRGGRRN 94

Query: 354 SKRYHCNSPDRN-----GEDDLATNFPCPGGIPLDEKHDGAVPITRNLRSRVITVEGSKA 190
           +  Y  N   R+     G  D         G+ +++        TR ++  VI+V  SK 
Sbjct: 95  TMLYKNNLNVRSDGLKVGILDSPVRVTRSQGVNIEDGVTEKKGRTRQVKDSVISVNKSKD 154

Query: 189 LQGDIKVPRRIVTRSNRKKAQVEVVASIPEVHSEEMKSSSDDGLVNKGRSKRQKCGNATV 10
             G       + T+   K  +V ++     +   E    ++DG+    R + +K    +V
Sbjct: 155 KVG-------VTTKRTLKNKEVGII-----LEKREENEGANDGVRMSRRVRSRKNAKESV 202

Query: 9   K 7
           +
Sbjct: 203 E 203


>ref|XP_001769619.1| predicted protein [Physcomitrella patens]
           gi|162679161|gb|EDQ65612.1| predicted protein
           [Physcomitrella patens]
          Length = 411

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 27/47 (57%), Positives = 38/47 (80%)
 Frame = -2

Query: 708 VDYESKPRRELQALCKQHGLPANLTNARMAENLASLLQANSEEIKPK 568
           ++Y+   RRELQALCK+HGLPAN TNA MA++LASLL  +++ I+ +
Sbjct: 1   MNYDELTRRELQALCKEHGLPANKTNAVMADSLASLLSDSNQSIRTR 47


>gb|EXC12322.1| hypothetical protein L484_004470 [Morus notabilis]
          Length = 3455

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 24/46 (52%), Positives = 36/46 (78%)
 Frame = -2

Query: 714 MEVDYESKPRRELQALCKQHGLPANLTNARMAENLASLLQANSEEI 577
           ME+D+    R+ LQALCK+HG+PANLTN+ MA+ L+SLL+ + + +
Sbjct: 1   MEMDFHGMKRKNLQALCKKHGIPANLTNSDMADRLSSLLKEDEKTL 46


Top