BLASTX nr result

ID: Zingiber25_contig00037942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00037942
         (287 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006646537.1| PREDICTED: uncharacterized protein LOC102710...    59   7e-07
ref|XP_002456749.1| hypothetical protein SORBIDRAFT_03g041880 [S...    58   1e-06

>ref|XP_006646537.1| PREDICTED: uncharacterized protein LOC102710554 [Oryza brachyantha]
          Length = 773

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 11/104 (10%)
 Frame = +2

Query: 2   KSADFTMPEEQ-STMRLPYKDILSTPSELKDFDKHKAGA----GATHRSRTSDSLD---Q 157
           KS DF M  +  ++ ++  KD+    SELKD +KHK  A      THRS+T ++ D    
Sbjct: 290 KSMDFPMGSDTVASTKISSKDMPHASSELKDLEKHKVAAVQPTDFTHRSKTVEAYDYAYS 349

Query: 158 AFRDK---VQVDFHSKKLHNGETREASTKVRRVDRYSTSDAFSM 280
           A+RD+   +Q+DF  K+ + GE R+ + K+ R +++   +   M
Sbjct: 350 AYRDRETSMQLDFQQKRAYTGENRDPTNKIHRKEKHGMGEFSGM 393


>ref|XP_002456749.1| hypothetical protein SORBIDRAFT_03g041880 [Sorghum bicolor]
           gi|241928724|gb|EES01869.1| hypothetical protein
           SORBIDRAFT_03g041880 [Sorghum bicolor]
          Length = 776

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 36/98 (36%), Positives = 60/98 (61%), Gaps = 9/98 (9%)
 Frame = +2

Query: 2   KSADFTMPEEQSTMRLPYKDILSTPSELKDFDKHKAGA---GATHRSRTSDSLD---QAF 163
           KS++F+  +  +  ++  KD+   P EL+D +KHKA A      H+S+TS++ D   Q +
Sbjct: 284 KSSEFSGGDAAARAKI-IKDVSHPPLELRDLEKHKAAALPVDYAHKSKTSETFDYAYQVY 342

Query: 164 RDK---VQVDFHSKKLHNGETREASTKVRRVDRYSTSD 268
           RDK   VQ+DF  +K+ +GE ++ S KV R +R+ T +
Sbjct: 343 RDKGTSVQLDFQQRKV-SGENQDPSNKVYRKERHGTGE 379


Top